EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000011853 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 5990 bases
Position: chrLG17:23963400-23969389
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000017526	La	PF05383.17	6.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000017712	-	1221	-	ENSPREP00000017526	406 (aa)	-	-

Gene Model

Click here to download ENSPREG00000011853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000011853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000011853	-	83	31.750	ENSPREG00000008067	larp6a	58	31.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000011853	-	87	54.294	ENSAPOG00000003568	-	94	54.294	Acanthochromis_polyacanthus
ENSPREG00000011853	-	86	52.486	ENSACIG00000008349	-	83	52.486	Amphilophus_citrinellus
ENSPREG00000011853	-	88	55.733	ENSAOCG00000004646	larp6b	95	55.733	Amphiprion_ocellaris
ENSPREG00000011853	-	87	55.946	ENSAPEG00000022748	-	92	55.946	Amphiprion_percula
ENSPREG00000011853	-	88	55.135	ENSATEG00000021222	-	93	55.135	Anabas_testudineus
ENSPREG00000011853	-	85	52.778	ENSACLG00000009988	larp6b	90	52.778	Astatotilapia_calliptera
ENSPREG00000011853	-	50	31.343	ENSCING00000018361	-	68	31.343	Ciona_intestinalis
ENSPREG00000011853	-	89	68.698	ENSCVAG00000012145	-	92	68.698	Cyprinodon_variegatus
ENSPREG00000011853	-	95	76.667	ENSFHEG00000010409	-	92	76.667	Fundulus_heteroclitus
ENSPREG00000011853	-	93	93.369	ENSGAFG00000020138	-	94	93.369	Gambusia_affinis
ENSPREG00000011853	-	85	52.500	ENSHBUG00000012344	larp6b	89	52.500	Haplochromis_burtoni
ENSPREG00000011853	-	86	54.167	ENSLBEG00000016460	-	98	53.994	Labrus_bergylta
ENSPREG00000011853	-	88	57.027	ENSMAMG00000005509	-	91	57.027	Mastacembelus_armatus
ENSPREG00000011853	-	85	52.500	ENSMZEG00005024390	larp6b	90	52.500	Maylandia_zebra
ENSPREG00000011853	-	87	51.762	ENSNBRG00000012748	larp6b	92	51.762	Neolamprologus_brichardi
ENSPREG00000011853	-	87	97.740	ENSPLAG00000005133	-	97	97.740	Poecilia_latipinna
ENSPREG00000011853	-	87	98.023	ENSPMEG00000019947	-	99	98.023	Poecilia_mexicana
ENSPREG00000011853	-	93	50.370	ENSPNYG00000007025	larp6b	97	50.370	Pundamilia_nyererei
ENSPREG00000011853	-	82	35.149	ENSPNAG00000023854	larp6b	84	35.149	Pygocentrus_nattereri
ENSPREG00000011853	-	66	62.409	ENSSDUG00000009842	-	83	62.409	Seriola_dumerili
ENSPREG00000011853	-	97	52.439	ENSSLDG00000017081	-	80	57.593	Seriola_lalandi_dorsalis
ENSPREG00000011853	-	86	56.604	ENSSPAG00000014320	-	94	55.276	Stegastes_partitus
ENSPREG00000011853	-	89	96.953	ENSXCOG00000018917	-	95	96.953	Xiphophorus_couchianus
ENSPREG00000011853	-	92	95.187	ENSXMAG00000025734	-	99	95.187	Xiphophorus_maculatus