EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000011856 (Gene tree)
Gene ID: -
Gene Symbol: casc3
Alias: -
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 7624 bases
Position: chrLG8:18960176-18967799
Accession: 103469010
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000017548	Btz	PF09405.10	4.9e-22	1	1
ENSPREP00000017537	Btz	PF09405.10	2.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000017734	-	2200	-	ENSPREP00000017548	662 (aa)	-	-
ENSPRET00000017723	-	1893	XM_008416458	ENSPREP00000017537	630 (aa)	XP_008414680	-

Gene Model

Click here to download ENSPREG00000011856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000011856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000011856	casc3	82	50.987	ENSG00000108349	CASC3	64	67.143	Homo_sapiens
ENSPREG00000011856	casc3	91	70.376	ENSAPOG00000008467	casc3	78	71.567	Acanthochromis_polyacanthus
ENSPREG00000011856	casc3	82	51.163	ENSAMEG00000007764	CASC3	65	67.857	Ailuropoda_melanoleuca
ENSPREG00000011856	casc3	99	72.354	ENSACIG00000000720	casc3	98	74.057	Amphilophus_citrinellus
ENSPREG00000011856	casc3	91	72.683	ENSAOCG00000016676	casc3	62	89.130	Amphiprion_ocellaris
ENSPREG00000011856	casc3	91	72.520	ENSAPEG00000006787	casc3	62	89.130	Amphiprion_percula
ENSPREG00000011856	casc3	85	87.500	ENSATEG00000017196	casc3	71	87.500	Anabas_testudineus
ENSPREG00000011856	casc3	82	47.735	ENSACAG00000002674	CASC3	60	69.919	Anolis_carolinensis
ENSPREG00000011856	casc3	79	48.897	ENSANAG00000034820	-	75	61.538	Aotus_nancymaae
ENSPREG00000011856	casc3	91	75.574	ENSACLG00000016198	casc3	78	76.759	Astatotilapia_calliptera
ENSPREG00000011856	casc3	92	67.692	ENSAMXG00000032452	casc3	58	73.571	Astyanax_mexicanus
ENSPREG00000011856	casc3	82	51.526	ENSBTAG00000006250	CASC3	63	67.857	Bos_taurus
ENSPREG00000011856	casc3	82	50.987	ENSCJAG00000016032	CASC3	67	64.667	Callithrix_jacchus
ENSPREG00000011856	casc3	82	51.706	ENSCAFG00000016141	CASC3	64	67.143	Canis_familiaris
ENSPREG00000011856	casc3	82	51.706	ENSCAFG00020018882	CASC3	75	67.143	Canis_lupus_dingo
ENSPREG00000011856	casc3	82	50.449	ENSCHIG00000006338	CASC3	64	67.143	Capra_hircus
ENSPREG00000011856	casc3	82	50.893	ENSTSYG00000002975	CASC3	65	67.143	Carlito_syrichta
ENSPREG00000011856	casc3	82	49.912	ENSCAPG00000010514	CASC3	79	67.857	Cavia_aperea
ENSPREG00000011856	casc3	82	50.088	ENSCPOG00000015139	CASC3	70	67.857	Cavia_porcellus
ENSPREG00000011856	casc3	82	51.150	ENSCCAG00000033620	CASC3	65	67.857	Cebus_capucinus
ENSPREG00000011856	casc3	82	51.075	ENSCATG00000033593	CASC3	64	67.143	Cercocebus_atys
ENSPREG00000011856	casc3	82	50.180	ENSCLAG00000013730	CASC3	69	65.714	Chinchilla_lanigera
ENSPREG00000011856	casc3	82	51.075	ENSCSAG00000002777	CASC3	64	67.143	Chlorocebus_sabaeus
ENSPREG00000011856	casc3	91	46.349	ENSCPBG00000004750	CASC3	66	70.968	Chrysemys_picta_bellii
ENSPREG00000011856	casc3	82	51.075	ENSCANG00000008814	CASC3	65	67.143	Colobus_angolensis_palliatus
ENSPREG00000011856	casc3	82	51.706	ENSCGRG00001014706	Casc3	65	67.143	Cricetulus_griseus_chok1gshd
ENSPREG00000011856	casc3	99	46.557	ENSCGRG00000001952	Casc3	98	45.758	Cricetulus_griseus_crigri
ENSPREG00000011856	casc3	91	78.125	ENSCSEG00000010047	casc3	77	68.669	Cynoglossus_semilaevis
ENSPREG00000011856	casc3	84	93.750	ENSCVAG00000014935	casc3	71	93.750	Cyprinodon_variegatus
ENSPREG00000011856	casc3	84	73.438	ENSDARG00000029911	casc3	57	74.265	Danio_rerio
ENSPREG00000011856	casc3	82	50.987	ENSDNOG00000017249	CASC3	61	67.857	Dasypus_novemcinctus
ENSPREG00000011856	casc3	65	66.892	ENSETEG00000013720	CASC3	64	68.571	Echinops_telfairi
ENSPREG00000011856	casc3	99	31.414	ENSEBUG00000010654	casc3	54	53.906	Eptatretus_burgeri
ENSPREG00000011856	casc3	82	51.429	ENSEASG00005002909	CASC3	75	67.857	Equus_asinus_asinus
ENSPREG00000011856	casc3	82	51.429	ENSECAG00000019947	CASC3	56	67.857	Equus_caballus
ENSPREG00000011856	casc3	98	64.045	ENSELUG00000015093	casc3	61	78.417	Esox_lucius
ENSPREG00000011856	casc3	82	51.071	ENSFCAG00000014998	CASC3	65	67.143	Felis_catus
ENSPREG00000011856	casc3	70	59.777	ENSFALG00000000412	CASC3	77	69.231	Ficedula_albicollis
ENSPREG00000011856	casc3	68	66.216	ENSFDAG00000020696	CASC3	70	67.857	Fukomys_damarensis
ENSPREG00000011856	casc3	91	82.810	ENSFHEG00000015793	casc3	79	82.479	Fundulus_heteroclitus
ENSPREG00000011856	casc3	82	47.561	ENSGALG00000031813	CASC3	67	66.667	Gallus_gallus
ENSPREG00000011856	casc3	89	93.613	ENSGAFG00000017148	casc3	68	93.478	Gambusia_affinis
ENSPREG00000011856	casc3	63	70.968	ENSGAGG00000008432	CASC3	72	69.841	Gopherus_agassizii
ENSPREG00000011856	casc3	99	45.225	ENSGGOG00000005067	CASC3	65	67.143	Gorilla_gorilla
ENSPREG00000011856	casc3	91	76.066	ENSHBUG00000013155	casc3	78	77.250	Haplochromis_burtoni
ENSPREG00000011856	casc3	82	49.819	ENSHGLG00000012117	CASC3	64	67.143	Heterocephalus_glaber_female
ENSPREG00000011856	casc3	82	49.819	ENSHGLG00100002268	CASC3	73	67.143	Heterocephalus_glaber_male
ENSPREG00000011856	casc3	93	65.152	ENSHCOG00000002664	casc3	78	62.768	Hippocampus_comes
ENSPREG00000011856	casc3	68	66.216	ENSSTOG00000006374	CASC3	65	67.857	Ictidomys_tridecemlineatus
ENSPREG00000011856	casc3	84	49.404	ENSJJAG00000023525	Casc3	64	67.391	Jaculus_jaculus
ENSPREG00000011856	casc3	91	79.520	ENSKMAG00000019507	casc3	84	79.200	Kryptolebias_marmoratus
ENSPREG00000011856	casc3	91	73.878	ENSLBEG00000005435	casc3	76	74.801	Labrus_bergylta
ENSPREG00000011856	casc3	79	45.037	ENSLACG00000013200	CASC3	60	56.522	Latimeria_chalumnae
ENSPREG00000011856	casc3	82	50.000	ENSLAFG00000000606	CASC3	65	67.143	Loxodonta_africana
ENSPREG00000011856	casc3	82	51.075	ENSMFAG00000041496	CASC3	71	67.143	Macaca_fascicularis
ENSPREG00000011856	casc3	82	51.075	ENSMMUG00000045187	CASC3	64	67.143	Macaca_mulatta
ENSPREG00000011856	casc3	82	51.075	ENSMLEG00000029049	CASC3	71	67.143	Mandrillus_leucophaeus
ENSPREG00000011856	casc3	91	73.786	ENSMAMG00000005235	casc3	79	74.434	Mastacembelus_armatus
ENSPREG00000011856	casc3	91	75.574	ENSMZEG00005003815	casc3	78	76.759	Maylandia_zebra
ENSPREG00000011856	casc3	81	47.018	ENSMGAG00000013247	CASC3	71	66.667	Meleagris_gallopavo
ENSPREG00000011856	casc3	73	49.109	ENSMAUG00000006023	Casc3	79	48.611	Mesocricetus_auratus
ENSPREG00000011856	casc3	82	50.000	ENSMICG00000003321	CASC3	64	67.143	Microcebus_murinus
ENSPREG00000011856	casc3	68	65.541	ENSMOCG00000013644	Casc3	65	67.143	Microtus_ochrogaster
ENSPREG00000011856	casc3	90	81.818	ENSMMOG00000014339	casc3	62	90.826	Mola_mola
ENSPREG00000011856	casc3	57	81.250	ENSMODG00000013044	CASC3	56	82.105	Monodelphis_domestica
ENSPREG00000011856	casc3	81	73.913	ENSMALG00000019771	casc3	95	67.480	Monopterus_albus
ENSPREG00000011856	casc3	82	51.706	MGP_CAROLIEiJ_G0017099	Casc3	65	66.429	Mus_caroli
ENSPREG00000011856	casc3	82	51.971	ENSMUSG00000078676	Casc3	65	66.429	Mus_musculus
ENSPREG00000011856	casc3	82	51.526	MGP_SPRETEiJ_G0017943	Casc3	65	66.429	Mus_spretus
ENSPREG00000011856	casc3	82	51.332	ENSMPUG00000014903	CASC3	64	67.143	Mustela_putorius_furo
ENSPREG00000011856	casc3	82	49.642	ENSMLUG00000010520	CASC3	63	66.429	Myotis_lucifugus
ENSPREG00000011856	casc3	82	51.079	ENSNGAG00000023121	Casc3	75	67.143	Nannospalax_galili
ENSPREG00000011856	casc3	82	50.805	ENSNLEG00000001598	CASC3	65	66.429	Nomascus_leucogenys
ENSPREG00000011856	casc3	62	62.937	ENSMEUG00000015662	CASC3	50	59.036	Notamacropus_eugenii
ENSPREG00000011856	casc3	55	44.828	ENSOPRG00000007240	-	53	43.280	Ochotona_princeps
ENSPREG00000011856	casc3	65	66.216	ENSODEG00000017858	CASC3	65	67.857	Octodon_degus
ENSPREG00000011856	casc3	91	76.098	ENSONIG00000009337	casc3	100	70.059	Oreochromis_niloticus
ENSPREG00000011856	casc3	68	66.216	ENSOCUG00000002954	CASC3	65	67.857	Oryctolagus_cuniculus
ENSPREG00000011856	casc3	91	69.752	ENSORLG00000023125	casc3	79	68.926	Oryzias_latipes
ENSPREG00000011856	casc3	81	50.530	ENSOGAG00000034486	CASC3	64	67.143	Otolemur_garnettii
ENSPREG00000011856	casc3	82	50.628	ENSOARG00000013239	CASC3	63	67.857	Ovis_aries
ENSPREG00000011856	casc3	82	50.987	ENSPPAG00000035069	CASC3	65	67.143	Pan_paniscus
ENSPREG00000011856	casc3	82	50.893	ENSPPRG00000023670	CASC3	65	67.143	Panthera_pardus
ENSPREG00000011856	casc3	82	50.536	ENSPTIG00000010891	CASC3	65	66.429	Panthera_tigris_altaica
ENSPREG00000011856	casc3	82	50.896	ENSPANG00000021708	CASC3	65	67.143	Papio_anubis
ENSPREG00000011856	casc3	90	52.744	ENSPKIG00000023186	casc3	59	73.188	Paramormyrops_kingsleyae
ENSPREG00000011856	casc3	68	65.541	ENSPEMG00000009774	Casc3	66	67.143	Peromyscus_maniculatus_bairdii
ENSPREG00000011856	casc3	58	81.250	ENSPCIG00000025678	CASC3	63	66.429	Phascolarctos_cinereus
ENSPREG00000011856	casc3	90	91.348	ENSPFOG00000017632	casc3	96	96.937	Poecilia_formosa
ENSPREG00000011856	casc3	91	97.355	ENSPLAG00000005268	casc3	79	97.355	Poecilia_latipinna
ENSPREG00000011856	casc3	86	90.842	ENSPMEG00000010299	casc3	93	91.026	Poecilia_mexicana
ENSPREG00000011856	casc3	82	51.892	ENSPPYG00000008467	CASC3	66	67.143	Pongo_abelii
ENSPREG00000011856	casc3	82	49.910	ENSPCOG00000008183	CASC3	64	67.143	Propithecus_coquereli
ENSPREG00000011856	casc3	82	50.536	ENSPVAG00000008556	CASC3	65	67.143	Pteropus_vampyrus
ENSPREG00000011856	casc3	91	76.066	ENSPNYG00000011962	casc3	78	77.250	Pundamilia_nyererei
ENSPREG00000011856	casc3	90	56.180	ENSPNAG00000015928	casc3	58	75.000	Pygocentrus_nattereri
ENSPREG00000011856	casc3	82	51.852	ENSRNOG00000009716	Casc3	71	67.143	Rattus_norvegicus
ENSPREG00000011856	casc3	99	45.042	ENSRBIG00000033289	CASC3	98	45.533	Rhinopithecus_bieti
ENSPREG00000011856	casc3	99	45.042	ENSRROG00000022337	CASC3	98	45.533	Rhinopithecus_roxellana
ENSPREG00000011856	casc3	82	50.532	ENSSBOG00000031406	CASC3	74	63.399	Saimiri_boliviensis_boliviensis
ENSPREG00000011856	casc3	66	64.430	ENSSHAG00000013338	CASC3	70	65.714	Sarcophilus_harrisii
ENSPREG00000011856	casc3	84	63.961	ENSSFOG00015002645	casc3	64	75.540	Scleropages_formosus
ENSPREG00000011856	casc3	91	71.750	ENSSMAG00000016096	casc3	77	72.026	Scophthalmus_maximus
ENSPREG00000011856	casc3	92	89.062	ENSSDUG00000016893	casc3	70	89.062	Seriola_dumerili
ENSPREG00000011856	casc3	83	90.351	ENSSLDG00000020308	casc3	99	79.191	Seriola_lalandi_dorsalis
ENSPREG00000011856	casc3	72	72.000	ENSSARG00000010378	CASC3	66	72.000	Sorex_araneus
ENSPREG00000011856	casc3	91	75.405	ENSSPAG00000023008	casc3	78	71.224	Stegastes_partitus
ENSPREG00000011856	casc3	82	49.910	ENSSSCG00000017477	CASC3	70	67.857	Sus_scrofa
ENSPREG00000011856	casc3	77	46.481	ENSTGUG00000002300	CASC3	61	52.147	Taeniopygia_guttata
ENSPREG00000011856	casc3	91	68.780	ENSTRUG00000000673	casc3	78	66.882	Takifugu_rubripes
ENSPREG00000011856	casc3	79	78.472	ENSTNIG00000003208	casc3	88	73.171	Tetraodon_nigroviridis
ENSPREG00000011856	casc3	53	76.000	ENSTTRG00000016896	CASC3	59	76.000	Tursiops_truncatus
ENSPREG00000011856	casc3	82	51.071	ENSUAMG00000015116	CASC3	71	67.143	Ursus_americanus
ENSPREG00000011856	casc3	82	50.536	ENSUMAG00000017697	CASC3	85	65.000	Ursus_maritimus
ENSPREG00000011856	casc3	82	50.893	ENSVVUG00000000997	CASC3	65	67.143	Vulpes_vulpes
ENSPREG00000011856	casc3	81	45.307	ENSXETG00000024395	casc3	79	46.435	Xenopus_tropicalis
ENSPREG00000011856	casc3	91	95.199	ENSXMAG00000013937	casc3	78	95.199	Xiphophorus_maculatus