EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPREG00000011880 (Gene tree)
Gene ID
103478357
Gene Symbol
rbms3
Alias
zgc:153698
Full Name
RNA binding motif single stranded interacting protein 3
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Minus strand
Length
217535 bases
Position
chrLG16:22984344-23201878
Accession
103478357
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000017701RRM_1PF00076.222.9e-3212
ENSPREP00000017701RRM_1PF00076.222.9e-3222
ENSPREP00000017641RRM_1PF00076.223.9e-3212
ENSPREP00000017641RRM_1PF00076.223.9e-3222
ENSPREP00000017610RRM_1PF00076.224.1e-3212
ENSPREP00000017610RRM_1PF00076.224.1e-3222
ENSPREP00000017667RRM_1PF00076.224.4e-3212
ENSPREP00000017667RRM_1PF00076.224.4e-3222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000017826-1423XM_008432136ENSPREP00000017641403 (aa)XP_008430358UPI0004A3BEC6
ENSPRET00000017889-1068-ENSPREP00000017701355 (aa)--
ENSPRET00000017854-1474XM_008432132ENSPREP00000017667420 (aa)XP_008430354UPI0004A4AE32
ENSPRET00000017797-1539XM_008432135ENSPREP00000017610410 (aa)XP_008430357-
Gene Model
Click here to download ENSPREG00000011880's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000011880's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPREG00000011880rbms35538.333ENSPREG00000018937elavl46037.356
ENSPREG00000011880rbms39284.636ENSPREG00000018221-9783.594
ENSPREG00000011880rbms35132.673ENSPREG00000015886pabpc1l9132.673
ENSPREG00000011880rbms35440.789ENSPREG00000018002-5240.789
ENSPREG00000011880rbms35038.333ENSPREG00000005877-7237.097
ENSPREG00000011880rbms35240.789ENSPREG00000007795-6940.789
ENSPREG00000011880rbms38033.750ENSPREG00000017378celf3b9333.750
ENSPREG00000011880rbms39469.122ENSPREG00000008146RBMS19367.024
ENSPREG00000011880rbms36883.402ENSPREG00000015038rbms2a7880.534
ENSPREG00000011880rbms38362.876ENSPREG00000020161rbms1a8262.264
ENSPREG00000011880rbms38533.750ENSPREG00000018923celf3a8033.750
ENSPREG00000011880rbms39462.356ENSPREG00000020560rbms2b9062.299
ENSPREG00000011880rbms35835.000ENSPREG00000005911si:dkey-205h23.25735.000
ENSPREG00000011880rbms35835.802ENSPREG00000021231celf46736.250
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000011880rbms39979.097ENSG00000144642RBMS310082.955Homo_sapiens
ENSPREG00000011880rbms310081.991ENSAPOG00000003432-10081.991Acanthochromis_polyacanthus
ENSPREG00000011880rbms39196.330ENSAPOG00000007266rbms39396.615Acanthochromis_polyacanthus
ENSPREG00000011880rbms37175.828ENSAMEG00000005947RBMS39975.828Ailuropoda_melanoleuca
ENSPREG00000011880rbms39979.063ENSACIG00000021113RBMS39584.699Amphilophus_citrinellus
ENSPREG00000011880rbms38587.708ENSACIG00000006987-8585.266Amphilophus_citrinellus
ENSPREG00000011880rbms39993.632ENSAOCG00000021274rbms39993.160Amphiprion_ocellaris
ENSPREG00000011880rbms39284.906ENSAOCG00000024104-10075.737Amphiprion_ocellaris
ENSPREG00000011880rbms39195.441ENSAPEG00000016299rbms39396.296Amphiprion_percula
ENSPREG00000011880rbms310075.772ENSAPEG00000009481-10075.772Amphiprion_percula
ENSPREG00000011880rbms39993.602ENSATEG00000024295rbms39993.602Anabas_testudineus
ENSPREG00000011880rbms310081.991ENSATEG00000008433-10081.991Anabas_testudineus
ENSPREG00000011880rbms39978.935ENSAPLG00000012270RBMS39978.190Anas_platyrhynchos
ENSPREG00000011880rbms39979.762ENSACAG00000028664RBMS39979.762Anolis_carolinensis
ENSPREG00000011880rbms39976.728ENSANAG00000021899RBMS39976.728Aotus_nancymaae
ENSPREG00000011880rbms39993.824ENSACLG00000018506rbms39993.349Astatotilapia_calliptera
ENSPREG00000011880rbms39284.367ENSACLG00000008976-9474.607Astatotilapia_calliptera
ENSPREG00000011880rbms39983.095ENSAMXG00000020388rbms39983.810Astyanax_mexicanus
ENSPREG00000011880rbms35986.058ENSAMXG00000043770-10078.244Astyanax_mexicanus
ENSPREG00000011880rbms39979.335ENSBTAG00000044062RBMS39979.335Bos_taurus
ENSPREG00000011880rbms39976.728ENSCJAG00000004312RBMS39976.728Callithrix_jacchus
ENSPREG00000011880rbms39976.552ENSCAFG00000005464RBMS39976.552Canis_familiaris
ENSPREG00000011880rbms39976.552ENSCAFG00020024980RBMS39976.552Canis_lupus_dingo
ENSPREG00000011880rbms39978.860ENSCHIG00000009144RBMS39978.860Capra_hircus
ENSPREG00000011880rbms37877.946ENSTSYG00000002615RBMS39977.946Carlito_syrichta
ENSPREG00000011880rbms39079.178ENSCAPG00000017783RBMS39379.178Cavia_aperea
ENSPREG00000011880rbms39979.762ENSCPOG00000006457RBMS39979.762Cavia_porcellus
ENSPREG00000011880rbms39976.728ENSCCAG00000008671RBMS39976.728Cebus_capucinus
ENSPREG00000011880rbms39976.674ENSCATG00000013222RBMS39976.674Cercocebus_atys
ENSPREG00000011880rbms39979.335ENSCLAG00000005866RBMS39979.335Chinchilla_lanigera
ENSPREG00000011880rbms36778.229ENSCSAG00000009655RBMS39978.229Chlorocebus_sabaeus
ENSPREG00000011880rbms38684.000ENSCHOG00000000758RBMS38078.693Choloepus_hoffmanni
ENSPREG00000011880rbms39980.238ENSCPBG00000022678RBMS39881.316Chrysemys_picta_bellii
ENSPREG00000011880rbms39976.728ENSCANG00000032137RBMS39976.728Colobus_angolensis_palliatus
ENSPREG00000011880rbms39976.190ENSCGRG00001007243Rbms39977.381Cricetulus_griseus_chok1gshd
ENSPREG00000011880rbms39976.190ENSCGRG00000004599Rbms39977.381Cricetulus_griseus_crigri
ENSPREG00000011880rbms39992.671ENSCSEG00000010011RBMS39991.962Cynoglossus_semilaevis
ENSPREG00000011880rbms310081.754ENSCSEG00000014677-9485.830Cynoglossus_semilaevis
ENSPREG00000011880rbms310082.464ENSCVAG00000022814-10081.280Cyprinodon_variegatus
ENSPREG00000011880rbms39998.329ENSCVAG00000022354rbms39998.329Cyprinodon_variegatus
ENSPREG00000011880rbms39983.771ENSDARG00000044574rbms310089.262Danio_rerio
ENSPREG00000011880rbms39978.385ENSDNOG00000016645RBMS39975.862Dasypus_novemcinctus
ENSPREG00000011880rbms39978.622ENSDORG00000007220Rbms39978.622Dipodomys_ordii
ENSPREG00000011880rbms38663.636ENSETEG00000009485-8064.773Echinops_telfairi
ENSPREG00000011880rbms37256.154ENSEBUG00000005830rbms38356.154Eptatretus_burgeri
ENSPREG00000011880rbms39978.860ENSEASG00005006152RBMS39978.860Equus_asinus_asinus
ENSPREG00000011880rbms39978.860ENSECAG00000017871RBMS39978.860Equus_caballus
ENSPREG00000011880rbms38477.852ENSEEUG00000014337RBMS310070.380Erinaceus_europaeus
ENSPREG00000011880rbms39979.433ENSELUG00000002862rbms39979.433Esox_lucius
ENSPREG00000011880rbms39682.519ENSELUG00000006905-9885.425Esox_lucius
ENSPREG00000011880rbms39978.622ENSFCAG00000002130RBMS39978.622Felis_catus
ENSPREG00000011880rbms39980.238ENSFALG00000009165RBMS39980.238Ficedula_albicollis
ENSPREG00000011880rbms39978.860ENSFDAG00000008278RBMS39978.860Fukomys_damarensis
ENSPREG00000011880rbms39990.704ENSFHEG00000004787RBMS39589.802Fundulus_heteroclitus
ENSPREG00000011880rbms38486.711ENSGMOG00000002600-9378.718Gadus_morhua
ENSPREG00000011880rbms39980.238ENSGALG00000011439RBMS39980.238Gallus_gallus
ENSPREG00000011880rbms310082.227ENSGAFG00000003329-10081.754Gambusia_affinis
ENSPREG00000011880rbms39999.433ENSGAFG00000000168rbms39999.481Gambusia_affinis
ENSPREG00000011880rbms36779.044ENSGAGG00000004039RBMS39979.044Gopherus_agassizii
ENSPREG00000011880rbms39976.728ENSGGOG00000007228RBMS39976.728Gorilla_gorilla
ENSPREG00000011880rbms39978.311ENSHBUG00000019785-9678.082Haplochromis_burtoni
ENSPREG00000011880rbms36695.319ENSHBUG00000021196rbms39492.193Haplochromis_burtoni
ENSPREG00000011880rbms39978.860ENSHGLG00000002170RBMS39978.860Heterocephalus_glaber_female
ENSPREG00000011880rbms39978.860ENSHGLG00100014278RBMS39978.860Heterocephalus_glaber_male
ENSPREG00000011880rbms310080.378ENSHCOG00000007894-10080.378Hippocampus_comes
ENSPREG00000011880rbms39983.810ENSIPUG00000017680rbms39984.524Ictalurus_punctatus
ENSPREG00000011880rbms39979.196ENSSTOG00000006324RBMS39979.097Ictidomys_tridecemlineatus
ENSPREG00000011880rbms39978.304ENSJJAG00000014708Rbms39976.247Jaculus_jaculus
ENSPREG00000011880rbms310081.754ENSKMAG00000012586-10081.754Kryptolebias_marmoratus
ENSPREG00000011880rbms39995.540ENSKMAG00000020500rbms39995.540Kryptolebias_marmoratus
ENSPREG00000011880rbms36384.791ENSLBEG00000006677rbms39784.791Labrus_bergylta
ENSPREG00000011880rbms310081.043ENSLBEG00000027388-10081.517Labrus_bergylta
ENSPREG00000011880rbms39981.190ENSLACG00000010581RBMS39981.429Latimeria_chalumnae
ENSPREG00000011880rbms37283.505ENSLOCG00000002328rbms39983.505Lepisosteus_oculatus
ENSPREG00000011880rbms39976.552ENSLAFG00000000354RBMS39976.552Loxodonta_africana
ENSPREG00000011880rbms39979.097ENSMFAG00000033300RBMS39979.097Macaca_fascicularis
ENSPREG00000011880rbms39979.097ENSMMUG00000004404RBMS39979.097Macaca_mulatta
ENSPREG00000011880rbms39976.728ENSMNEG00000035839RBMS39976.728Macaca_nemestrina
ENSPREG00000011880rbms39976.674ENSMLEG00000029464RBMS39976.674Mandrillus_leucophaeus
ENSPREG00000011880rbms39185.870ENSMAMG00000002176-8285.870Mastacembelus_armatus
ENSPREG00000011880rbms39992.908ENSMAMG00000024043rbms39992.199Mastacembelus_armatus
ENSPREG00000011880rbms310078.984ENSMZEG00005026469-9678.984Maylandia_zebra
ENSPREG00000011880rbms39993.824ENSMZEG00005006308rbms39993.349Maylandia_zebra
ENSPREG00000011880rbms39976.190ENSMAUG00000016436Rbms39977.381Mesocricetus_auratus
ENSPREG00000011880rbms39976.782ENSMICG00000049249RBMS39976.782Microcebus_murinus
ENSPREG00000011880rbms39975.714ENSMOCG00000006997Rbms39976.905Microtus_ochrogaster
ENSPREG00000011880rbms310081.473ENSMMOG00000015071-10081.473Mola_mola
ENSPREG00000011880rbms39096.605ENSMMOG00000008471RBMS39596.848Mola_mola
ENSPREG00000011880rbms39973.094ENSMODG00000015125RBMS39973.483Monodelphis_domestica
ENSPREG00000011880rbms310082.464ENSMALG00000009155-10082.464Monopterus_albus
ENSPREG00000011880rbms39993.144ENSMALG00000019536RBMS39992.671Monopterus_albus
ENSPREG00000011880rbms39975.714MGP_CAROLIEiJ_G0032783Rbms39976.905Mus_caroli
ENSPREG00000011880rbms39976.190ENSMUSG00000039607Rbms39982.857Mus_musculus
ENSPREG00000011880rbms39976.010MGP_PahariEiJ_G0015650Rbms39982.857Mus_pahari
ENSPREG00000011880rbms39976.190MGP_SPRETEiJ_G0033930Rbms39982.857Mus_spretus
ENSPREG00000011880rbms39976.552ENSMPUG00000011956RBMS39976.552Mustela_putorius_furo
ENSPREG00000011880rbms39979.097ENSMLUG00000000659RBMS39979.097Myotis_lucifugus
ENSPREG00000011880rbms39978.810ENSNGAG00000014039Rbms39978.810Nannospalax_galili
ENSPREG00000011880rbms310081.517ENSNBRG00000018065-10081.517Neolamprologus_brichardi
ENSPREG00000011880rbms39976.728ENSNLEG00000004129RBMS39976.728Nomascus_leucogenys
ENSPREG00000011880rbms39969.954ENSMEUG00000004772RBMS39970.413Notamacropus_eugenii
ENSPREG00000011880rbms39976.782ENSOPRG00000006808RBMS38576.782Ochotona_princeps
ENSPREG00000011880rbms39978.860ENSODEG00000003651RBMS39978.860Octodon_degus
ENSPREG00000011880rbms39791.687ENSONIG00000007172rbms39988.783Oreochromis_niloticus
ENSPREG00000011880rbms39977.931ENSOANG00000010529RBMS39977.931Ornithorhynchus_anatinus
ENSPREG00000011880rbms39976.092ENSOCUG00000004840RBMS39976.092Oryctolagus_cuniculus
ENSPREG00000011880rbms310081.991ENSORLG00000002306-10081.991Oryzias_latipes
ENSPREG00000011880rbms39992.840ENSORLG00000005370RBMS39992.840Oryzias_latipes
ENSPREG00000011880rbms39992.840ENSORLG00020022674RBMS39992.840Oryzias_latipes_hni
ENSPREG00000011880rbms310081.991ENSORLG00020008496-10081.991Oryzias_latipes_hni
ENSPREG00000011880rbms310081.991ENSORLG00015015719-10081.991Oryzias_latipes_hsok
ENSPREG00000011880rbms39992.124ENSORLG00015005509rbms39993.079Oryzias_latipes_hsok
ENSPREG00000011880rbms39993.317ENSOMEG00000014805RBMS39993.317Oryzias_melastigma
ENSPREG00000011880rbms39682.776ENSOMEG00000007677-9685.054Oryzias_melastigma
ENSPREG00000011880rbms39975.862ENSOARG00000014684RBMS39975.862Ovis_aries
ENSPREG00000011880rbms39976.728ENSPPAG00000036519RBMS39976.728Pan_paniscus
ENSPREG00000011880rbms39977.650ENSPPRG00000002761RBMS39976.037Panthera_pardus
ENSPREG00000011880rbms39980.048ENSPTIG00000011568RBMS39978.385Panthera_tigris_altaica
ENSPREG00000011880rbms39979.097ENSPTRG00000014709RBMS39979.097Pan_troglodytes
ENSPREG00000011880rbms39976.674ENSPANG00000010234RBMS39976.674Papio_anubis
ENSPREG00000011880rbms35989.904ENSPKIG00000007989-10083.588Paramormyrops_kingsleyae
ENSPREG00000011880rbms39979.762ENSPSIG00000005269RBMS39979.762Pelodiscus_sinensis
ENSPREG00000011880rbms39682.732ENSPMGG00000021683-9685.014Periophthalmus_magnuspinnatus
ENSPREG00000011880rbms39293.272ENSPMGG00000021544rbms38594.495Periophthalmus_magnuspinnatus
ENSPREG00000011880rbms39973.508ENSPEMG00000001117Rbms39974.702Peromyscus_maniculatus_bairdii
ENSPREG00000011880rbms38586.424ENSPCIG00000006106RBMS38882.075Phascolarctos_cinereus
ENSPREG00000011880rbms39999.761ENSPFOG00000017887rbms39999.761Poecilia_formosa
ENSPREG00000011880rbms37997.179ENSPLAG00000016866-8297.179Poecilia_latipinna
ENSPREG00000011880rbms310081.517ENSPMEG00000002993-10081.517Poecilia_mexicana
ENSPREG00000011880rbms39964.368ENSPPYG00000014050RBMS38264.368Pongo_abelii
ENSPREG00000011880rbms39956.682ENSPCAG00000006307RBMS39956.682Procavia_capensis
ENSPREG00000011880rbms39976.959ENSPCOG00000017136RBMS39976.959Propithecus_coquereli
ENSPREG00000011880rbms38884.000ENSPVAG00000014037RBMS38278.947Pteropus_vampyrus
ENSPREG00000011880rbms39993.587ENSPNYG00000010546rbms39993.112Pundamilia_nyererei
ENSPREG00000011880rbms310081.517ENSPNYG00000012624-10081.517Pundamilia_nyererei
ENSPREG00000011880rbms35085.876ENSPNAG00000026763-7685.876Pygocentrus_nattereri
ENSPREG00000011880rbms39983.333ENSPNAG00000001800rbms39984.048Pygocentrus_nattereri
ENSPREG00000011880rbms39976.429ENSRNOG00000025881Rbms39977.619Rattus_norvegicus
ENSPREG00000011880rbms39976.959ENSRBIG00000035863RBMS39976.959Rhinopithecus_bieti
ENSPREG00000011880rbms39080.739ENSRROG00000027512RBMS39280.739Rhinopithecus_roxellana
ENSPREG00000011880rbms39976.728ENSSBOG00000020232RBMS39976.728Saimiri_boliviensis_boliviensis
ENSPREG00000011880rbms39482.789ENSSHAG00000002411RBMS39980.780Sarcophilus_harrisii
ENSPREG00000011880rbms310082.143ENSSFOG00015008578rbms310082.143Scleropages_formosus
ENSPREG00000011880rbms38986.120ENSSMAG00000020065-9383.684Scophthalmus_maximus
ENSPREG00000011880rbms39986.775ENSSMAG00000004997rbms39993.151Scophthalmus_maximus
ENSPREG00000011880rbms39995.745ENSSDUG00000013656RBMS39995.745Seriola_dumerili
ENSPREG00000011880rbms310081.991ENSSDUG00000019287-10081.991Seriola_dumerili
ENSPREG00000011880rbms39995.305ENSSLDG00000020276RBMS39995.305Seriola_lalandi_dorsalis
ENSPREG00000011880rbms310081.991ENSSLDG00000013224-10081.991Seriola_lalandi_dorsalis
ENSPREG00000011880rbms38471.812ENSSARG00000000695RBMS39268.235Sorex_araneus
ENSPREG00000011880rbms37277.852ENSSPUG00000017197RBMS39777.852Sphenodon_punctatus
ENSPREG00000011880rbms39284.906ENSSPAG00000003983-10074.603Stegastes_partitus
ENSPREG00000011880rbms39993.632ENSSPAG00000020693rbms39895.775Stegastes_partitus
ENSPREG00000011880rbms39978.860ENSSSCG00000036381RBMS39978.860Sus_scrofa
ENSPREG00000011880rbms37978.614ENSTGUG00000003572RBMS39978.614Taeniopygia_guttata
ENSPREG00000011880rbms39990.307ENSTRUG00000021719RBMS39990.071Takifugu_rubripes
ENSPREG00000011880rbms310072.120ENSTRUG00000007482-10074.353Takifugu_rubripes
ENSPREG00000011880rbms38387.542ENSTBEG00000005362RBMS39281.471Tupaia_belangeri
ENSPREG00000011880rbms39976.092ENSTTRG00000006202RBMS39976.092Tursiops_truncatus
ENSPREG00000011880rbms39976.552ENSUMAG00000000263RBMS39976.552Ursus_maritimus
ENSPREG00000011880rbms39070.449ENSVPAG00000003842RBMS39270.449Vicugna_pacos
ENSPREG00000011880rbms39080.263ENSVVUG00000004660RBMS39986.087Vulpes_vulpes
ENSPREG00000011880rbms37274.183ENSXETG00000032055RBMS39874.183Xenopus_tropicalis
ENSPREG00000011880rbms39668.354ENSXCOG00000019600-9569.786Xiphophorus_couchianus
ENSPREG00000011880rbms310081.754ENSXMAG00000014382-10081.754Xiphophorus_maculatus
ENSPREG00000011880rbms39999.433ENSXMAG00000021783rbms39999.433Xiphophorus_maculatus

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