EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000012053 (Gene tree)
Gene ID: -
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 1561 bases
Position: chrLG23:12325033-12326593
Accession: 103459413
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000017834	MRP-S32	PF10210.9	4.9e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000018024	-	399	XM_008400933	ENSPREP00000017834	132 (aa)	XP_008399155	-

Gene Model

Click here to download ENSPREG00000012053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000012053's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000012053	mrpl42	100	65.693	ENSAPOG00000010677	mrpl42	94	65.693	Acanthochromis_polyacanthus
ENSPREG00000012053	mrpl42	100	66.912	ENSAOCG00000011620	mrpl42	94	66.912	Amphiprion_ocellaris
ENSPREG00000012053	mrpl42	100	66.912	ENSAPEG00000019516	mrpl42	94	66.912	Amphiprion_percula
ENSPREG00000012053	mrpl42	89	63.115	ENSATEG00000014106	mrpl42	93	63.115	Anabas_testudineus
ENSPREG00000012053	mrpl42	77	60.000	ENSACAG00000012606	MRPL42	72	60.000	Anolis_carolinensis
ENSPREG00000012053	mrpl42	87	72.269	ENSACLG00000026856	mrpl42	82	72.269	Astatotilapia_calliptera
ENSPREG00000012053	mrpl42	75	48.544	ENSAMXG00000035149	mrpl42	75	48.544	Astyanax_mexicanus
ENSPREG00000012053	mrpl42	98	55.224	ENSCSEG00000010067	mrpl42	91	55.224	Cynoglossus_semilaevis
ENSPREG00000012053	mrpl42	100	75.000	ENSCVAG00000002612	mrpl42	94	75.000	Cyprinodon_variegatus
ENSPREG00000012053	mrpl42	89	59.016	ENSDARG00000079391	mrpl42	84	59.016	Danio_rerio
ENSPREG00000012053	mrpl42	76	46.364	ENSEBUG00000005581	mrpl42	82	46.364	Eptatretus_burgeri
ENSPREG00000012053	mrpl42	89	62.810	ENSELUG00000001973	mrpl42	83	62.810	Esox_lucius
ENSPREG00000012053	mrpl42	100	70.588	ENSFHEG00000018696	mrpl42	94	70.588	Fundulus_heteroclitus
ENSPREG00000012053	mrpl42	70	76.289	ENSGMOG00000002972	mrpl42	100	76.289	Gadus_morhua
ENSPREG00000012053	mrpl42	87	91.597	ENSGAFG00000018373	mrpl42	82	91.597	Gambusia_affinis
ENSPREG00000012053	mrpl42	70	75.000	ENSGACG00000018811	mrpl42	99	75.000	Gasterosteus_aculeatus
ENSPREG00000012053	mrpl42	87	72.269	ENSHBUG00000015960	mrpl42	82	72.269	Haplochromis_burtoni
ENSPREG00000012053	mrpl42	95	60.769	ENSHCOG00000014046	mrpl42	89	60.769	Hippocampus_comes
ENSPREG00000012053	mrpl42	72	55.556	ENSIPUG00000015395	mrpl42	67	55.556	Ictalurus_punctatus
ENSPREG00000012053	mrpl42	100	63.235	ENSKMAG00000013671	mrpl42	94	63.235	Kryptolebias_marmoratus
ENSPREG00000012053	mrpl42	100	61.765	ENSLBEG00000028618	mrpl42	93	61.765	Labrus_bergylta
ENSPREG00000012053	mrpl42	50	66.667	ENSLOCG00000015284	mrpl42	52	66.667	Lepisosteus_oculatus
ENSPREG00000012053	mrpl42	87	73.109	ENSMAMG00000009737	mrpl42	81	73.109	Mastacembelus_armatus
ENSPREG00000012053	mrpl42	87	72.269	ENSMZEG00005008545	mrpl42	79	72.269	Maylandia_zebra
ENSPREG00000012053	mrpl42	83	67.544	ENSMMOG00000002317	mrpl42	75	67.544	Mola_mola
ENSPREG00000012053	mrpl42	87	70.588	ENSMALG00000015794	mrpl42	74	70.588	Monopterus_albus
ENSPREG00000012053	mrpl42	96	65.672	ENSNBRG00000003307	mrpl42	92	65.672	Neolamprologus_brichardi
ENSPREG00000012053	mrpl42	87	72.269	ENSONIG00000011753	mrpl42	82	72.269	Oreochromis_niloticus
ENSPREG00000012053	mrpl42	89	49.587	ENSOANG00000019984	-	78	49.587	Ornithorhynchus_anatinus
ENSPREG00000012053	mrpl42	86	72.269	ENSORLG00000013500	mrpl42	69	72.269	Oryzias_latipes
ENSPREG00000012053	mrpl42	96	67.910	ENSORLG00020000548	mrpl42	92	67.910	Oryzias_latipes_hni
ENSPREG00000012053	mrpl42	96	66.165	ENSORLG00015016984	mrpl42	92	66.165	Oryzias_latipes_hsok
ENSPREG00000012053	mrpl42	96	66.165	ENSOMEG00000010700	mrpl42	92	66.165	Oryzias_melastigma
ENSPREG00000012053	mrpl42	87	63.025	ENSPKIG00000025457	mrpl42	82	63.025	Paramormyrops_kingsleyae
ENSPREG00000012053	mrpl42	73	65.347	ENSPMGG00000019705	mrpl42	71	65.347	Periophthalmus_magnuspinnatus
ENSPREG00000012053	mrpl42	87	45.113	ENSPMAG00000008091	mrpl42	86	45.113	Petromyzon_marinus
ENSPREG00000012053	mrpl42	86	93.220	ENSPFOG00000016539	mrpl42	80	93.220	Poecilia_formosa
ENSPREG00000012053	mrpl42	86	92.373	ENSPLAG00000001255	mrpl42	81	92.373	Poecilia_latipinna
ENSPREG00000012053	mrpl42	100	81.618	ENSPMEG00000016462	mrpl42	94	81.618	Poecilia_mexicana
ENSPREG00000012053	mrpl42	87	72.269	ENSPNYG00000009586	mrpl42	82	72.269	Pundamilia_nyererei
ENSPREG00000012053	mrpl42	73	55.000	ENSPNAG00000020753	mrpl42	69	55.000	Pygocentrus_nattereri
ENSPREG00000012053	mrpl42	92	65.079	ENSSMAG00000000262	mrpl42	87	65.079	Scophthalmus_maximus
ENSPREG00000012053	mrpl42	87	72.269	ENSSDUG00000005949	mrpl42	82	72.269	Seriola_dumerili
ENSPREG00000012053	mrpl42	100	63.235	ENSSLDG00000010159	mrpl42	94	63.235	Seriola_lalandi_dorsalis
ENSPREG00000012053	mrpl42	96	61.832	ENSTRUG00000025949	mrpl42	89	61.832	Takifugu_rubripes
ENSPREG00000012053	mrpl42	84	56.522	ENSXETG00000032902	mrpl42	92	56.522	Xenopus_tropicalis
ENSPREG00000012053	mrpl42	70	90.722	ENSXCOG00000013875	mrpl42	75	90.722	Xiphophorus_couchianus