EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000012166 (Gene tree)
Gene ID: 103472479
Gene Symbol: -
Alias: -
Full Name: transcriptional repressor scratch 1-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 8648 bases
Position: chrLG11:16994654-17003301
Accession: 103472479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000017981	zf-C2H2	PF00096.26	1.2e-24	1	4
ENSPREP00000017981	zf-C2H2	PF00096.26	1.2e-24	2	4
ENSPREP00000017981	zf-C2H2	PF00096.26	1.2e-24	3	4
ENSPREP00000017981	zf-C2H2	PF00096.26	1.2e-24	4	4
ENSPREP00000017981	zf-met	PF12874.7	7.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000018172	-	894	XM_008422151	ENSPREP00000017981	297 (aa)	XP_008420373	UPI0004A2EC5A

Gene Model

Click here to download ENSPREG00000012166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000012166's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000012166	-	50	49.451	ENSPREG00000001743	-	68	49.451
ENSPREG00000012166	-	52	36.765	ENSPREG00000018366	prdm5	60	36.765
ENSPREG00000012166	-	56	38.384	ENSPREG00000013476	-	94	40.367
ENSPREG00000012166	-	53	43.636	ENSPREG00000003614	-	96	42.105
ENSPREG00000012166	-	60	36.691	ENSPREG00000013965	-	96	36.691
ENSPREG00000012166	-	52	34.586	ENSPREG00000015132	-	60	36.806
ENSPREG00000012166	-	94	33.220	ENSPREG00000018470	-	98	33.779
ENSPREG00000012166	-	56	34.328	ENSPREG00000021246	-	84	34.328
ENSPREG00000012166	-	99	75.758	ENSPREG00000018985	scrt1b	99	75.758
ENSPREG00000012166	-	56	39.552	ENSPREG00000001952	-	74	41.333
ENSPREG00000012166	-	65	31.472	ENSPREG00000000451	-	80	31.472
ENSPREG00000012166	-	52	37.121	ENSPREG00000005144	-	81	40.000
ENSPREG00000012166	-	95	36.806	ENSPREG00000014097	gfi1ab	99	36.806
ENSPREG00000012166	-	98	37.121	ENSPREG00000015254	-	90	37.121
ENSPREG00000012166	-	67	36.207	ENSPREG00000014105	-	82	38.060
ENSPREG00000012166	-	56	42.857	ENSPREG00000014028	-	99	36.957
ENSPREG00000012166	-	68	39.091	ENSPREG00000003894	-	81	39.098
ENSPREG00000012166	-	56	37.313	ENSPREG00000017631	znf668	73	37.879
ENSPREG00000012166	-	53	37.778	ENSPREG00000019161	-	94	37.778
ENSPREG00000012166	-	100	58.537	ENSPREG00000001147	scrt2	99	58.537
ENSPREG00000012166	-	80	42.202	ENSPREG00000011741	-	98	39.130
ENSPREG00000012166	-	52	38.806	ENSPREG00000007135	-	52	38.806
ENSPREG00000012166	-	51	43.182	ENSPREG00000015017	-	90	43.182
ENSPREG00000012166	-	72	41.071	ENSPREG00000021718	gfi1b	63	41.071
ENSPREG00000012166	-	70	39.091	ENSPREG00000003650	-	69	39.091

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000012166	-	99	76.094	ENSAPOG00000009279	scrt1b	99	76.094	Acanthochromis_polyacanthus
ENSPREG00000012166	-	100	87.625	ENSAPOG00000015197	-	100	87.625	Acanthochromis_polyacanthus
ENSPREG00000012166	-	100	62.626	ENSAPOG00000003680	scrt2	99	62.626	Acanthochromis_polyacanthus
ENSPREG00000012166	-	100	62.290	ENSACIG00000012604	scrt2	99	62.290	Amphilophus_citrinellus
ENSPREG00000012166	-	100	93.645	ENSACIG00000006586	-	100	93.645	Amphilophus_citrinellus
ENSPREG00000012166	-	97	54.369	ENSACIG00000001296	-	96	53.722	Amphilophus_citrinellus
ENSPREG00000012166	-	99	75.421	ENSACIG00000013613	scrt1b	99	75.421	Amphilophus_citrinellus
ENSPREG00000012166	-	100	62.626	ENSAOCG00000021557	scrt2	99	62.626	Amphiprion_ocellaris
ENSPREG00000012166	-	100	94.983	ENSAOCG00000023304	-	100	94.983	Amphiprion_ocellaris
ENSPREG00000012166	-	99	76.094	ENSAOCG00000003910	scrt1b	99	76.094	Amphiprion_ocellaris
ENSPREG00000012166	-	100	94.983	ENSAPEG00000005677	-	100	94.983	Amphiprion_percula
ENSPREG00000012166	-	99	75.758	ENSAPEG00000000869	scrt1b	99	75.758	Amphiprion_percula
ENSPREG00000012166	-	100	62.626	ENSAPEG00000022558	scrt2	99	62.626	Amphiprion_percula
ENSPREG00000012166	-	100	84.950	ENSATEG00000011660	-	100	84.950	Anabas_testudineus
ENSPREG00000012166	-	100	59.819	ENSATEG00000023998	scrt2	99	59.517	Anabas_testudineus
ENSPREG00000012166	-	97	53.823	ENSATEG00000003195	-	97	53.823	Anabas_testudineus
ENSPREG00000012166	-	99	74.662	ENSATEG00000002302	scrt1b	99	75.758	Anabas_testudineus
ENSPREG00000012166	-	69	78.922	ENSACAG00000016109	SCRT2	91	78.922	Anolis_carolinensis
ENSPREG00000012166	-	100	90.099	ENSACLG00000012046	-	100	90.099	Astatotilapia_calliptera
ENSPREG00000012166	-	99	75.758	ENSACLG00000007162	scrt1b	99	75.758	Astatotilapia_calliptera
ENSPREG00000012166	-	87	66.795	ENSAMXG00000034158	scrt2	90	66.795	Astyanax_mexicanus
ENSPREG00000012166	-	99	72.297	ENSAMXG00000042624	SCRT1	100	72.297	Astyanax_mexicanus
ENSPREG00000012166	-	99	78.378	ENSAMXG00000038085	scrt1a	99	78.378	Astyanax_mexicanus
ENSPREG00000012166	-	55	59.509	WBGene00000468	ces-1	79	47.368	Caenorhabditis_elegans
ENSPREG00000012166	-	87	58.052	ENSCPBG00000027613	SCRT2	100	58.052	Chrysemys_picta_bellii
ENSPREG00000012166	-	99	75.421	ENSCPBG00000018899	SCRT1	99	75.421	Chrysemys_picta_bellii
ENSPREG00000012166	-	100	91.304	ENSCSEG00000014892	-	100	91.304	Cynoglossus_semilaevis
ENSPREG00000012166	-	100	60.681	ENSCSEG00000021542	scrt2	99	60.681	Cynoglossus_semilaevis
ENSPREG00000012166	-	99	75.000	ENSCSEG00000008596	scrt1b	99	75.758	Cynoglossus_semilaevis
ENSPREG00000012166	-	100	95.652	ENSCVAG00000003190	-	100	95.652	Cyprinodon_variegatus
ENSPREG00000012166	-	100	58.232	ENSCVAG00000021038	scrt2	99	58.232	Cyprinodon_variegatus
ENSPREG00000012166	-	99	75.084	ENSCVAG00000009561	scrt1b	99	75.084	Cyprinodon_variegatus
ENSPREG00000012166	-	99	77.441	ENSDARG00000100821	scrt1a	99	77.441	Danio_rerio
ENSPREG00000012166	-	99	75.758	ENSDARG00000040214	scrt1b	99	75.758	Danio_rerio
ENSPREG00000012166	-	96	61.688	ENSELUG00000023883	scrt2	96	59.077	Esox_lucius
ENSPREG00000012166	-	99	77.288	ENSELUG00000005435	scrt1b	98	77.288	Esox_lucius
ENSPREG00000012166	-	100	77.258	ENSELUG00000022228	scrt1a	100	77.258	Esox_lucius
ENSPREG00000012166	-	67	78.500	ENSFALG00000005718	SCRT2	83	79.000	Ficedula_albicollis
ENSPREG00000012166	-	97	57.785	ENSFDAG00000008733	SCRT1	97	57.785	Fukomys_damarensis
ENSPREG00000012166	-	100	95.652	ENSFHEG00000009794	-	100	95.652	Fundulus_heteroclitus
ENSPREG00000012166	-	100	63.880	ENSFHEG00000005732	scrt2	99	63.880	Fundulus_heteroclitus
ENSPREG00000012166	-	99	75.421	ENSFHEG00000014820	scrt1b	99	75.421	Fundulus_heteroclitus
ENSPREG00000012166	-	99	75.338	ENSGMOG00000000629	scrt1b	99	75.338	Gadus_morhua
ENSPREG00000012166	-	56	96.032	ENSGMOG00000013833	-	56	96.032	Gadus_morhua
ENSPREG00000012166	-	97	56.289	ENSGMOG00000019519	scrt2	96	56.289	Gadus_morhua
ENSPREG00000012166	-	97	61.379	ENSGALG00000028912	SCRT2	97	61.824	Gallus_gallus
ENSPREG00000012166	-	100	60.759	ENSGAFG00000003093	scrt2	99	60.759	Gambusia_affinis
ENSPREG00000012166	-	100	89.226	ENSGAFG00000009650	-	100	89.226	Gambusia_affinis
ENSPREG00000012166	-	99	75.758	ENSGAFG00000007636	scrt1b	99	75.758	Gambusia_affinis
ENSPREG00000012166	-	99	73.898	ENSGACG00000008982	scrt1b	99	73.898	Gasterosteus_aculeatus
ENSPREG00000012166	-	100	87.625	ENSGACG00000004072	-	100	87.625	Gasterosteus_aculeatus
ENSPREG00000012166	-	99	75.932	ENSGAGG00000011736	SCRT1	99	75.932	Gopherus_agassizii
ENSPREG00000012166	-	60	81.356	ENSGAGG00000020760	-	68	81.921	Gopherus_agassizii
ENSPREG00000012166	-	96	62.500	ENSGAGG00000020761	SCRT2	96	62.847	Gopherus_agassizii
ENSPREG00000012166	-	99	75.758	ENSHBUG00000016621	scrt1b	99	75.758	Haplochromis_burtoni
ENSPREG00000012166	-	97	63.542	ENSHBUG00000012492	scrt2	96	63.542	Haplochromis_burtoni
ENSPREG00000012166	-	100	92.977	ENSHBUG00000019101	-	100	92.977	Haplochromis_burtoni
ENSPREG00000012166	-	99	75.421	ENSHCOG00000016704	scrt1b	99	75.421	Hippocampus_comes
ENSPREG00000012166	-	97	60.714	ENSHCOG00000008116	scrt2	97	60.714	Hippocampus_comes
ENSPREG00000012166	-	100	72.787	ENSHCOG00000016179	-	100	72.787	Hippocampus_comes
ENSPREG00000012166	-	99	70.068	ENSIPUG00000005547	-	100	70.068	Ictalurus_punctatus
ENSPREG00000012166	-	98	78.231	ENSIPUG00000004551	scrt1a	99	78.231	Ictalurus_punctatus
ENSPREG00000012166	-	100	59.146	ENSKMAG00000018087	scrt2	99	59.146	Kryptolebias_marmoratus
ENSPREG00000012166	-	100	94.314	ENSKMAG00000009489	-	100	94.314	Kryptolebias_marmoratus
ENSPREG00000012166	-	99	75.421	ENSKMAG00000005484	scrt1b	99	75.421	Kryptolebias_marmoratus
ENSPREG00000012166	-	100	59.337	ENSLBEG00000015419	scrt2	99	59.036	Labrus_bergylta
ENSPREG00000012166	-	100	92.593	ENSLBEG00000023388	-	100	92.593	Labrus_bergylta
ENSPREG00000012166	-	99	74.411	ENSLACG00000003588	SCRT1	99	74.411	Latimeria_chalumnae
ENSPREG00000012166	-	97	52.351	ENSLOCG00000002246	scrt2	97	53.750	Lepisosteus_oculatus
ENSPREG00000012166	-	99	76.431	ENSLOCG00000007573	scrt1b	99	76.431	Lepisosteus_oculatus
ENSPREG00000012166	-	96	91.852	ENSMFAG00000035496	SCRT1	71	85.621	Macaca_fascicularis
ENSPREG00000012166	-	99	74.662	ENSMAMG00000011698	scrt1b	99	75.758	Mastacembelus_armatus
ENSPREG00000012166	-	100	59.517	ENSMAMG00000001291	scrt2	99	59.517	Mastacembelus_armatus
ENSPREG00000012166	-	97	63.542	ENSMZEG00005026445	scrt2	96	63.542	Maylandia_zebra
ENSPREG00000012166	-	100	92.977	ENSMZEG00005026702	-	100	92.977	Maylandia_zebra
ENSPREG00000012166	-	99	75.758	ENSMZEG00005005627	scrt1b	99	75.758	Maylandia_zebra
ENSPREG00000012166	-	65	80.829	ENSMGAG00000016579	SCRT2	80	80.829	Meleagris_gallopavo
ENSPREG00000012166	-	100	59.146	ENSMMOG00000009272	scrt2	99	59.451	Mola_mola
ENSPREG00000012166	-	99	74.074	ENSMMOG00000003327	scrt1b	99	74.074	Mola_mola
ENSPREG00000012166	-	100	92.000	ENSMMOG00000018345	-	100	92.000	Mola_mola
ENSPREG00000012166	-	99	75.338	ENSMALG00000012704	scrt1b	99	76.431	Monopterus_albus
ENSPREG00000012166	-	100	61.204	ENSMALG00000013656	scrt2	99	61.204	Monopterus_albus
ENSPREG00000012166	-	61	68.108	ENSNGAG00000020815	Scrt2	91	67.368	Nannospalax_galili
ENSPREG00000012166	-	100	62.290	ENSNBRG00000007221	scrt2	99	62.290	Neolamprologus_brichardi
ENSPREG00000012166	-	100	93.311	ENSNBRG00000014882	-	100	93.311	Neolamprologus_brichardi
ENSPREG00000012166	-	99	74.074	ENSNBRG00000013983	scrt1b	99	74.074	Neolamprologus_brichardi
ENSPREG00000012166	-	99	75.421	ENSONIG00000006007	scrt1b	99	75.421	Oreochromis_niloticus
ENSPREG00000012166	-	97	89.508	ENSONIG00000019809	-	100	89.508	Oreochromis_niloticus
ENSPREG00000012166	-	97	57.639	ENSONIG00000003152	-	96	57.639	Oreochromis_niloticus
ENSPREG00000012166	-	100	60.000	ENSONIG00000016758	scrt2	99	60.000	Oreochromis_niloticus
ENSPREG00000012166	-	99	74.324	ENSORLG00000025651	scrt1b	99	75.084	Oryzias_latipes
ENSPREG00000012166	-	100	90.365	ENSORLG00000022825	-	100	90.365	Oryzias_latipes
ENSPREG00000012166	-	100	58.788	ENSORLG00000024051	scrt2	99	58.788	Oryzias_latipes
ENSPREG00000012166	-	99	74.324	ENSORLG00020012967	scrt1b	99	75.084	Oryzias_latipes_hni
ENSPREG00000012166	-	100	58.788	ENSORLG00020011478	scrt2	99	58.788	Oryzias_latipes_hni
ENSPREG00000012166	-	100	58.788	ENSORLG00015005524	scrt2	99	58.788	Oryzias_latipes_hsok
ENSPREG00000012166	-	100	90.033	ENSORLG00015010104	-	100	90.033	Oryzias_latipes_hsok
ENSPREG00000012166	-	99	74.324	ENSORLG00015019165	scrt1b	99	75.084	Oryzias_latipes_hsok
ENSPREG00000012166	-	99	74.324	ENSOMEG00000003925	scrt1b	99	75.084	Oryzias_melastigma
ENSPREG00000012166	-	100	59.451	ENSOMEG00000002661	scrt2	99	59.451	Oryzias_melastigma
ENSPREG00000012166	-	100	91.919	ENSOMEG00000000286	-	100	91.919	Oryzias_melastigma
ENSPREG00000012166	-	99	77.441	ENSPKIG00000020085	scrt1a	99	77.441	Paramormyrops_kingsleyae
ENSPREG00000012166	-	99	76.431	ENSPKIG00000022303	SCRT1	99	76.431	Paramormyrops_kingsleyae
ENSPREG00000012166	-	100	87.291	ENSPMGG00000021402	-	100	87.291	Periophthalmus_magnuspinnatus
ENSPREG00000012166	-	99	73.064	ENSPMGG00000002260	scrt1b	99	73.064	Periophthalmus_magnuspinnatus
ENSPREG00000012166	-	100	63.758	ENSPMGG00000016561	scrt2	99	63.758	Periophthalmus_magnuspinnatus
ENSPREG00000012166	-	100	99.327	ENSPFOG00000005616	-	100	99.327	Poecilia_formosa
ENSPREG00000012166	-	99	75.758	ENSPFOG00000017719	scrt1b	99	75.758	Poecilia_formosa
ENSPREG00000012166	-	100	58.537	ENSPFOG00000007738	scrt2	99	58.537	Poecilia_formosa
ENSPREG00000012166	-	100	99.327	ENSPLAG00000011718	-	100	99.327	Poecilia_latipinna
ENSPREG00000012166	-	99	75.758	ENSPLAG00000009876	scrt1b	99	75.758	Poecilia_latipinna
ENSPREG00000012166	-	100	63.636	ENSPLAG00000005765	scrt2	99	63.636	Poecilia_latipinna
ENSPREG00000012166	-	100	63.636	ENSPMEG00000001538	scrt2	99	63.636	Poecilia_mexicana
ENSPREG00000012166	-	100	99.327	ENSPMEG00000011706	-	100	99.327	Poecilia_mexicana
ENSPREG00000012166	-	99	75.758	ENSPMEG00000013274	scrt1b	99	75.758	Poecilia_mexicana
ENSPREG00000012166	-	100	92.642	ENSPNYG00000008865	-	100	92.642	Pundamilia_nyererei
ENSPREG00000012166	-	97	63.542	ENSPNYG00000013109	scrt2	96	63.542	Pundamilia_nyererei
ENSPREG00000012166	-	99	75.758	ENSPNYG00000017733	scrt1b	99	75.758	Pundamilia_nyererei
ENSPREG00000012166	-	99	77.703	ENSPNAG00000017415	scrt1a	99	77.703	Pygocentrus_nattereri
ENSPREG00000012166	-	99	73.064	ENSPNAG00000027880	-	100	73.401	Pygocentrus_nattereri
ENSPREG00000012166	-	99	76.094	ENSSFOG00015001195	SCRT1	99	76.094	Scleropages_formosus
ENSPREG00000012166	-	100	90.397	ENSSMAG00000005122	-	100	90.397	Scophthalmus_maximus
ENSPREG00000012166	-	100	76.254	ENSSMAG00000019207	scrt1b	100	76.254	Scophthalmus_maximus
ENSPREG00000012166	-	99	76.094	ENSSDUG00000007752	scrt1b	99	76.094	Seriola_dumerili
ENSPREG00000012166	-	100	95.318	ENSSDUG00000013215	-	100	95.318	Seriola_dumerili
ENSPREG00000012166	-	100	61.270	ENSSDUG00000001637	scrt2	98	60.635	Seriola_dumerili
ENSPREG00000012166	-	99	76.094	ENSSLDG00000017166	scrt1b	99	76.094	Seriola_lalandi_dorsalis
ENSPREG00000012166	-	100	95.318	ENSSLDG00000016454	-	100	95.318	Seriola_lalandi_dorsalis
ENSPREG00000012166	-	100	59.517	ENSSLDG00000013565	scrt2	99	58.912	Seriola_lalandi_dorsalis
ENSPREG00000012166	-	97	62.153	ENSSPUG00000018637	SCRT2	97	62.153	Sphenodon_punctatus
ENSPREG00000012166	-	99	76.094	ENSSPAG00000002200	scrt1b	99	76.094	Stegastes_partitus
ENSPREG00000012166	-	100	62.963	ENSSPAG00000014018	scrt2	99	62.963	Stegastes_partitus
ENSPREG00000012166	-	100	94.649	ENSSPAG00000006788	-	100	94.649	Stegastes_partitus
ENSPREG00000012166	-	67	78.392	ENSTGUG00000006801	SCRT2	86	78.894	Taeniopygia_guttata
ENSPREG00000012166	-	87	83.333	ENSTRUG00000019558	-	82	84.109	Takifugu_rubripes
ENSPREG00000012166	-	99	75.000	ENSTRUG00000011637	scrt1b	100	75.000	Takifugu_rubripes
ENSPREG00000012166	-	100	90.635	ENSTRUG00000012719	-	100	91.304	Takifugu_rubripes
ENSPREG00000012166	-	97	61.716	ENSTRUG00000007620	scrt2	97	61.716	Takifugu_rubripes
ENSPREG00000012166	-	100	62.667	ENSTNIG00000012473	scrt2	100	62.667	Tetraodon_nigroviridis
ENSPREG00000012166	-	99	75.084	ENSTNIG00000018384	scrt1b	99	75.084	Tetraodon_nigroviridis
ENSPREG00000012166	-	99	76.094	ENSXCOG00000019675	scrt1b	99	76.094	Xiphophorus_couchianus
ENSPREG00000012166	-	100	60.127	ENSXCOG00000014367	scrt2	99	60.127	Xiphophorus_couchianus
ENSPREG00000012166	-	100	89.226	ENSXCOG00000019861	-	100	89.226	Xiphophorus_couchianus
ENSPREG00000012166	-	99	76.094	ENSXMAG00000027885	scrt1b	99	76.094	Xiphophorus_maculatus
ENSPREG00000012166	-	100	98.653	ENSXMAG00000015353	-	100	98.653	Xiphophorus_maculatus
ENSPREG00000012166	-	100	57.927	ENSXMAG00000028567	scrt2	99	57.927	Xiphophorus_maculatus