EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000012172 (Gene tree)
Gene ID: 103457701
Gene Symbol: mrps18a
Alias: si:ch211-117l16.3|zgc:152724
Full Name: mitochondrial ribosomal protein S18A
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 9123 bases
Position: chrLG21:14548545-14557667
Accession: 103457701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000017997	Ribosomal_S18	PF01084.20	3.8e-16	1	1
ENSPREP00000018005	Ribosomal_S18	PF01084.20	4.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000018196	-	3082	XM_008398036	ENSPREP00000018005	220 (aa)	XP_008396258	UPI0004A45CF5
ENSPRET00000018188	-	561	-	ENSPREP00000017997	186 (aa)	-	-

Gene Model

Click here to download ENSPREG00000012172's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000012172's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000012172	mrps18a	83	66.026	ENSG00000096080	MRPS18A	84	67.470	Homo_sapiens
ENSPREG00000012172	mrps18a	83	64.744	ENSAMEG00000012117	MRPS18A	87	64.535	Ailuropoda_melanoleuca
ENSPREG00000012172	mrps18a	95	81.250	ENSACIG00000017782	mrps18a	100	81.250	Amphilophus_citrinellus
ENSPREG00000012172	mrps18a	62	73.723	ENSAOCG00000005723	mrps18a	81	73.723	Amphiprion_ocellaris
ENSPREG00000012172	mrps18a	95	77.404	ENSAPEG00000006971	mrps18a	100	77.404	Amphiprion_percula
ENSPREG00000012172	mrps18a	95	78.365	ENSATEG00000003132	mrps18a	100	78.365	Anabas_testudineus
ENSPREG00000012172	mrps18a	82	73.684	ENSAPLG00000016280	MRPS18A	100	73.585	Anas_platyrhynchos
ENSPREG00000012172	mrps18a	85	66.667	ENSACAG00000000642	MRPS18A	87	69.461	Anolis_carolinensis
ENSPREG00000012172	mrps18a	89	62.275	ENSANAG00000030889	MRPS18A	84	66.867	Aotus_nancymaae
ENSPREG00000012172	mrps18a	95	80.288	ENSACLG00000008170	mrps18a	100	80.288	Astatotilapia_calliptera
ENSPREG00000012172	mrps18a	93	60.870	ENSAMXG00000036348	mrps18a	99	60.870	Astyanax_mexicanus
ENSPREG00000012172	mrps18a	61	77.193	ENSAMXG00000036055	-	84	77.193	Astyanax_mexicanus
ENSPREG00000012172	mrps18a	89	62.275	ENSBTAG00000025571	MRPS18A	84	66.867	Bos_taurus
ENSPREG00000012172	mrps18a	55	33.058	WBGene00022583	mrps-18A	61	33.058	Caenorhabditis_elegans
ENSPREG00000012172	mrps18a	89	62.275	ENSCJAG00000017382	MRPS18A	84	66.867	Callithrix_jacchus
ENSPREG00000012172	mrps18a	89	61.078	ENSCAFG00000001928	MRPS18A	84	65.663	Canis_familiaris
ENSPREG00000012172	mrps18a	89	61.078	ENSCAFG00020012064	MRPS18A	70	65.663	Canis_lupus_dingo
ENSPREG00000012172	mrps18a	84	64.968	ENSCHIG00000013039	MRPS18A	84	66.265	Capra_hircus
ENSPREG00000012172	mrps18a	92	62.069	ENSTSYG00000001390	MRPS18A	87	66.279	Carlito_syrichta
ENSPREG00000012172	mrps18a	77	66.667	ENSCAPG00000016029	MRPS18A	89	66.667	Cavia_aperea
ENSPREG00000012172	mrps18a	78	65.306	ENSCPOG00000022949	MRPS18A	83	65.244	Cavia_porcellus
ENSPREG00000012172	mrps18a	88	61.818	ENSCCAG00000021108	MRPS18A	98	59.694	Cebus_capucinus
ENSPREG00000012172	mrps18a	89	62.874	ENSCATG00000012963	MRPS18A	84	67.470	Cercocebus_atys
ENSPREG00000012172	mrps18a	83	62.821	ENSCLAG00000012929	MRPS18A	89	61.932	Chinchilla_lanigera
ENSPREG00000012172	mrps18a	89	62.874	ENSCSAG00000012127	MRPS18A	99	59.204	Chlorocebus_sabaeus
ENSPREG00000012172	mrps18a	95	57.075	ENSCPBG00000025243	MRPS18A	100	57.075	Chrysemys_picta_bellii
ENSPREG00000012172	mrps18a	78	38.255	ENSCING00000024771	-	82	39.024	Ciona_intestinalis
ENSPREG00000012172	mrps18a	70	38.346	ENSCSAVG00000009539	-	78	39.007	Ciona_savignyi
ENSPREG00000012172	mrps18a	93	58.738	ENSCANG00000039873	MRPS18A	98	58.738	Colobus_angolensis_palliatus
ENSPREG00000012172	mrps18a	89	58.084	ENSCGRG00001017882	Mrps18a	89	62.048	Cricetulus_griseus_chok1gshd
ENSPREG00000012172	mrps18a	78	51.724	ENSCGRG00000000079	Mrps18a	84	50.303	Cricetulus_griseus_crigri
ENSPREG00000012172	mrps18a	97	73.364	ENSCSEG00000019650	mrps18a	100	71.770	Cynoglossus_semilaevis
ENSPREG00000012172	mrps18a	95	87.500	ENSCVAG00000006511	mrps18a	100	87.500	Cyprinodon_variegatus
ENSPREG00000012172	mrps18a	95	63.507	ENSDARG00000024465	mrps18a	100	65.403	Danio_rerio
ENSPREG00000012172	mrps18a	83	65.385	ENSDNOG00000035755	MRPS18A	84	66.867	Dasypus_novemcinctus
ENSPREG00000012172	mrps18a	94	58.654	ENSDORG00000014583	Mrps18a	99	58.654	Dipodomys_ordii
ENSPREG00000012172	mrps18a	62	38.655	FBgn0051450	mRpS18A	92	36.111	Drosophila_melanogaster
ENSPREG00000012172	mrps18a	80	54.839	ENSETEG00000014171	MRPS18A	100	54.839	Echinops_telfairi
ENSPREG00000012172	mrps18a	70	70.455	ENSEASG00005003485	MRPS18A	60	65.854	Equus_asinus_asinus
ENSPREG00000012172	mrps18a	70	69.697	ENSECAG00000004870	MRPS18A	60	65.244	Equus_caballus
ENSPREG00000012172	mrps18a	95	72.381	ENSELUG00000005253	mrps18a	100	72.381	Esox_lucius
ENSPREG00000012172	mrps18a	93	61.453	ENSFCAG00000036031	MRPS18A	91	61.453	Felis_catus
ENSPREG00000012172	mrps18a	95	62.019	ENSFALG00000011356	MRPS18A	100	62.019	Ficedula_albicollis
ENSPREG00000012172	mrps18a	83	58.710	ENSFDAG00000012875	MRPS18A	85	58.721	Fukomys_damarensis
ENSPREG00000012172	mrps18a	95	88.462	ENSFHEG00000009014	mrps18a	100	88.462	Fundulus_heteroclitus
ENSPREG00000012172	mrps18a	95	67.943	ENSGMOG00000012493	mrps18a	100	67.943	Gadus_morhua
ENSPREG00000012172	mrps18a	74	61.350	ENSGALG00000010296	MRPS18A	100	61.350	Gallus_gallus
ENSPREG00000012172	mrps18a	100	92.473	ENSGAFG00000005211	mrps18a	100	92.473	Gambusia_affinis
ENSPREG00000012172	mrps18a	95	75.000	ENSGACG00000013370	mrps18a	100	75.000	Gasterosteus_aculeatus
ENSPREG00000012172	mrps18a	80	71.622	ENSGAGG00000017954	MRPS18A	79	71.622	Gopherus_agassizii
ENSPREG00000012172	mrps18a	89	62.874	ENSGGOG00000006303	-	84	67.470	Gorilla_gorilla
ENSPREG00000012172	mrps18a	95	80.288	ENSHBUG00000014682	mrps18a	100	80.288	Haplochromis_burtoni
ENSPREG00000012172	mrps18a	83	64.103	ENSHGLG00000014356	MRPS18A	87	63.953	Heterocephalus_glaber_female
ENSPREG00000012172	mrps18a	83	64.103	ENSHGLG00100010988	MRPS18A	87	63.953	Heterocephalus_glaber_male
ENSPREG00000012172	mrps18a	95	74.038	ENSHCOG00000000856	mrps18a	100	74.038	Hippocampus_comes
ENSPREG00000012172	mrps18a	95	65.238	ENSIPUG00000017406	mrps18a	100	66.190	Ictalurus_punctatus
ENSPREG00000012172	mrps18a	90	58.654	ENSSTOG00000004490	MRPS18A	99	58.654	Ictidomys_tridecemlineatus
ENSPREG00000012172	mrps18a	84	65.605	ENSJJAG00000006567	Mrps18a	84	68.072	Jaculus_jaculus
ENSPREG00000012172	mrps18a	95	79.808	ENSKMAG00000014910	mrps18a	100	79.808	Kryptolebias_marmoratus
ENSPREG00000012172	mrps18a	95	77.885	ENSLBEG00000003391	mrps18a	99	77.885	Labrus_bergylta
ENSPREG00000012172	mrps18a	95	54.327	ENSLACG00000022160	mrps18a	100	54.327	Latimeria_chalumnae
ENSPREG00000012172	mrps18a	95	64.840	ENSLOCG00000016008	mrps18a	100	64.840	Lepisosteus_oculatus
ENSPREG00000012172	mrps18a	84	65.190	ENSLAFG00000001168	MRPS18A	93	62.500	Loxodonta_africana
ENSPREG00000012172	mrps18a	89	62.874	ENSMFAG00000038311	MRPS18A	99	59.204	Macaca_fascicularis
ENSPREG00000012172	mrps18a	89	62.874	ENSMMUG00000014749	MRPS18A	99	59.204	Macaca_mulatta
ENSPREG00000012172	mrps18a	84	65.605	ENSMNEG00000044642	MRPS18A	100	56.938	Macaca_nemestrina
ENSPREG00000012172	mrps18a	84	65.605	ENSMLEG00000041828	MRPS18A	100	67.925	Mandrillus_leucophaeus
ENSPREG00000012172	mrps18a	95	76.442	ENSMAMG00000015478	mrps18a	100	76.442	Mastacembelus_armatus
ENSPREG00000012172	mrps18a	95	80.288	ENSMZEG00005014925	mrps18a	100	80.288	Maylandia_zebra
ENSPREG00000012172	mrps18a	90	65.896	ENSMGAG00000010915	MRPS18A	88	68.639	Meleagris_gallopavo
ENSPREG00000012172	mrps18a	89	62.275	ENSMICG00000005062	MRPS18A	84	66.867	Microcebus_murinus
ENSPREG00000012172	mrps18a	89	62.874	ENSMOCG00000021207	-	84	67.470	Microtus_ochrogaster
ENSPREG00000012172	mrps18a	84	61.783	ENSMOCG00000015168	-	87	62.651	Microtus_ochrogaster
ENSPREG00000012172	mrps18a	95	78.846	ENSMMOG00000015248	mrps18a	100	78.846	Mola_mola
ENSPREG00000012172	mrps18a	89	52.857	ENSMODG00000018952	MRPS18A	87	56.459	Monodelphis_domestica
ENSPREG00000012172	mrps18a	96	80.189	ENSMALG00000017044	mrps18a	93	80.189	Monopterus_albus
ENSPREG00000012172	mrps18a	89	62.275	MGP_CAROLIEiJ_G0021656	Mrps18a	84	66.265	Mus_caroli
ENSPREG00000012172	mrps18a	89	62.275	ENSMUSG00000023967	Mrps18a	84	66.265	Mus_musculus
ENSPREG00000012172	mrps18a	89	61.677	MGP_PahariEiJ_G0020648	Mrps18a	84	65.663	Mus_pahari
ENSPREG00000012172	mrps18a	89	62.275	MGP_SPRETEiJ_G0022568	Mrps18a	84	66.265	Mus_spretus
ENSPREG00000012172	mrps18a	89	62.275	ENSMPUG00000012868	MRPS18A	72	65.116	Mustela_putorius_furo
ENSPREG00000012172	mrps18a	87	65.031	ENSMLUG00000017755	MRPS18A	82	70.186	Myotis_lucifugus
ENSPREG00000012172	mrps18a	84	63.057	ENSNGAG00000020052	Mrps18a	89	63.372	Nannospalax_galili
ENSPREG00000012172	mrps18a	95	81.250	ENSNBRG00000021152	mrps18a	100	81.250	Neolamprologus_brichardi
ENSPREG00000012172	mrps18a	89	62.275	ENSNLEG00000003865	MRPS18A	84	66.867	Nomascus_leucogenys
ENSPREG00000012172	mrps18a	95	48.092	ENSMEUG00000013986	MRPS18A	100	47.710	Notamacropus_eugenii
ENSPREG00000012172	mrps18a	90	60.526	ENSOPRG00000007680	MRPS18A	79	60.526	Ochotona_princeps
ENSPREG00000012172	mrps18a	83	64.744	ENSODEG00000015388	MRPS18A	85	65.868	Octodon_degus
ENSPREG00000012172	mrps18a	95	81.250	ENSONIG00000000609	mrps18a	100	81.250	Oreochromis_niloticus
ENSPREG00000012172	mrps18a	81	66.447	ENSOANG00000001955	MRPS18A	97	67.949	Ornithorhynchus_anatinus
ENSPREG00000012172	mrps18a	89	61.078	ENSOCUG00000005544	MRPS18A	99	58.209	Oryctolagus_cuniculus
ENSPREG00000012172	mrps18a	95	76.923	ENSORLG00000023864	mrps18a	100	76.923	Oryzias_latipes
ENSPREG00000012172	mrps18a	95	76.442	ENSORLG00020002882	mrps18a	100	76.442	Oryzias_latipes_hni
ENSPREG00000012172	mrps18a	95	75.962	ENSORLG00015022065	mrps18a	100	75.962	Oryzias_latipes_hsok
ENSPREG00000012172	mrps18a	95	73.558	ENSOMEG00000018124	mrps18a	100	73.558	Oryzias_melastigma
ENSPREG00000012172	mrps18a	89	63.473	ENSOGAG00000026551	MRPS18A	84	68.072	Otolemur_garnettii
ENSPREG00000012172	mrps18a	84	64.968	ENSOARG00000008279	MRPS18A	84	66.265	Ovis_aries
ENSPREG00000012172	mrps18a	89	62.874	ENSPPAG00000036291	MRPS18A	84	67.470	Pan_paniscus
ENSPREG00000012172	mrps18a	89	62.874	ENSPPRG00000006429	MRPS18A	84	67.470	Panthera_pardus
ENSPREG00000012172	mrps18a	93	61.453	ENSPTIG00000001653	MRPS18A	91	61.453	Panthera_tigris_altaica
ENSPREG00000012172	mrps18a	89	62.874	ENSPTRG00000018209	MRPS18A	84	67.470	Pan_troglodytes
ENSPREG00000012172	mrps18a	89	62.874	ENSPANG00000006967	MRPS18A	99	59.204	Papio_anubis
ENSPREG00000012172	mrps18a	99	63.636	ENSPKIG00000012807	mrps18a	92	63.636	Paramormyrops_kingsleyae
ENSPREG00000012172	mrps18a	92	58.378	ENSPSIG00000013672	MRPS18A	96	58.378	Pelodiscus_sinensis
ENSPREG00000012172	mrps18a	96	71.038	ENSPMGG00000000493	mrps18a	100	68.571	Periophthalmus_magnuspinnatus
ENSPREG00000012172	mrps18a	89	61.677	ENSPEMG00000000405	Mrps18a	84	66.265	Peromyscus_maniculatus_bairdii
ENSPREG00000012172	mrps18a	88	62.130	ENSPMAG00000007012	mrps18a	96	66.102	Petromyzon_marinus
ENSPREG00000012172	mrps18a	95	59.330	ENSPCIG00000024858	MRPS18A	100	59.330	Phascolarctos_cinereus
ENSPREG00000012172	mrps18a	81	96.000	ENSPFOG00000009046	mrps18a	100	96.226	Poecilia_formosa
ENSPREG00000012172	mrps18a	95	96.154	ENSPLAG00000011106	mrps18a	100	96.154	Poecilia_latipinna
ENSPREG00000012172	mrps18a	95	95.673	ENSPMEG00000000736	mrps18a	100	95.673	Poecilia_mexicana
ENSPREG00000012172	mrps18a	94	58.173	ENSPPYG00000017282	MRPS18A	99	58.173	Pongo_abelii
ENSPREG00000012172	mrps18a	82	50.495	ENSPCAG00000004192	MRPS18A	98	52.451	Procavia_capensis
ENSPREG00000012172	mrps18a	89	62.275	ENSPCOG00000014911	MRPS18A	84	66.867	Propithecus_coquereli
ENSPREG00000012172	mrps18a	84	68.235	ENSPVAG00000002758	MRPS18A	62	71.277	Pteropus_vampyrus
ENSPREG00000012172	mrps18a	95	79.808	ENSPNYG00000014753	mrps18a	100	79.808	Pundamilia_nyererei
ENSPREG00000012172	mrps18a	95	65.403	ENSPNAG00000023462	mrps18a	100	66.351	Pygocentrus_nattereri
ENSPREG00000012172	mrps18a	89	61.677	ENSRNOG00000019511	Mrps18a	84	65.663	Rattus_norvegicus
ENSPREG00000012172	mrps18a	88	62.424	ENSRBIG00000028789	MRPS18A	82	68.323	Rhinopithecus_bieti
ENSPREG00000012172	mrps18a	88	62.424	ENSRROG00000042368	-	82	68.323	Rhinopithecus_roxellana
ENSPREG00000012172	mrps18a	88	61.818	ENSSBOG00000019943	MRPS18A	83	66.463	Saimiri_boliviensis_boliviensis
ENSPREG00000012172	mrps18a	89	64.671	ENSSHAG00000015048	-	84	69.880	Sarcophilus_harrisii
ENSPREG00000012172	mrps18a	95	64.593	ENSSFOG00015005628	mrps18a	100	64.593	Scleropages_formosus
ENSPREG00000012172	mrps18a	95	75.962	ENSSMAG00000009353	mrps18a	100	75.962	Scophthalmus_maximus
ENSPREG00000012172	mrps18a	95	74.038	ENSSDUG00000011655	mrps18a	100	74.038	Seriola_dumerili
ENSPREG00000012172	mrps18a	95	75.481	ENSSLDG00000025435	mrps18a	100	75.481	Seriola_lalandi_dorsalis
ENSPREG00000012172	mrps18a	95	61.429	ENSSPUG00000011517	MRPS18A	100	61.429	Sphenodon_punctatus
ENSPREG00000012172	mrps18a	95	80.769	ENSSPAG00000000034	mrps18a	100	80.769	Stegastes_partitus
ENSPREG00000012172	mrps18a	81	69.536	ENSSSCG00000001692	MRPS18A	84	69.880	Sus_scrofa
ENSPREG00000012172	mrps18a	80	71.622	ENSTGUG00000008142	MRPS18A	100	71.622	Taeniopygia_guttata
ENSPREG00000012172	mrps18a	95	79.327	ENSTRUG00000025134	mrps18a	100	79.327	Takifugu_rubripes
ENSPREG00000012172	mrps18a	95	78.365	ENSTNIG00000016302	mrps18a	100	78.365	Tetraodon_nigroviridis
ENSPREG00000012172	mrps18a	84	64.444	ENSTBEG00000004094	MRPS18A	71	68.817	Tupaia_belangeri
ENSPREG00000012172	mrps18a	84	68.605	ENSTTRG00000006354	MRPS18A	65	72.727	Tursiops_truncatus
ENSPREG00000012172	mrps18a	89	61.078	ENSUAMG00000013758	MRPS18A	87	63.953	Ursus_americanus
ENSPREG00000012172	mrps18a	89	61.078	ENSUMAG00000005910	MRPS18A	87	63.953	Ursus_maritimus
ENSPREG00000012172	mrps18a	72	59.854	ENSVVUG00000022444	-	68	59.854	Vulpes_vulpes
ENSPREG00000012172	mrps18a	89	61.078	ENSVVUG00000029092	-	84	65.663	Vulpes_vulpes
ENSPREG00000012172	mrps18a	56	75.962	ENSXETG00000003270	mrps18a	82	68.000	Xenopus_tropicalis
ENSPREG00000012172	mrps18a	95	84.135	ENSXCOG00000007223	mrps18a	100	84.135	Xiphophorus_couchianus
ENSPREG00000012172	mrps18a	95	93.269	ENSXMAG00000004867	mrps18a	100	93.269	Xiphophorus_maculatus