EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000012197 (Gene tree)
Gene ID: 103457054
Gene Symbol: rnaseh1
Alias: zgc:91971
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 7841 bases
Position: chrLG21:343991-351831
Accession: 103457054
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000018030	RNase_H	PF00075.24	2.1e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000018222	-	4052	XM_008396963	ENSPREP00000018030	301 (aa)	XP_008395185	UPI0004A31B22

Gene Model

Click here to download ENSPREG00000012197's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000012197's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000012197	rnaseh1	90	55.515	ENSG00000171865	RNASEH1	90	55.515	Homo_sapiens
ENSPREG00000012197	rnaseh1	100	68.439	ENSAPOG00000000412	rnaseh1	98	68.439	Acanthochromis_polyacanthus
ENSPREG00000012197	rnaseh1	90	53.676	ENSAMEG00000018433	RNASEH1	89	54.074	Ailuropoda_melanoleuca
ENSPREG00000012197	rnaseh1	100	71.096	ENSACIG00000014666	rnaseh1	97	71.096	Amphilophus_citrinellus
ENSPREG00000012197	rnaseh1	100	70.100	ENSAOCG00000015210	rnaseh1	98	70.100	Amphiprion_ocellaris
ENSPREG00000012197	rnaseh1	100	70.199	ENSAPEG00000014104	rnaseh1	98	70.199	Amphiprion_percula
ENSPREG00000012197	rnaseh1	100	70.100	ENSATEG00000000598	rnaseh1	96	73.646	Anabas_testudineus
ENSPREG00000012197	rnaseh1	86	53.053	ENSAPLG00000001961	RNASEH1	100	53.053	Anas_platyrhynchos
ENSPREG00000012197	rnaseh1	91	49.020	ENSACAG00000016857	rnaseh1	93	49.020	Anolis_carolinensis
ENSPREG00000012197	rnaseh1	90	55.515	ENSANAG00000024055	RNASEH1	90	55.515	Aotus_nancymaae
ENSPREG00000012197	rnaseh1	100	71.895	ENSACLG00000006741	rnaseh1	97	72.222	Astatotilapia_calliptera
ENSPREG00000012197	rnaseh1	99	50.336	ENSAMXG00000042940	rnaseh1	97	57.246	Astyanax_mexicanus
ENSPREG00000012197	rnaseh1	99	53.156	ENSBTAG00000016235	RNASEH1	99	53.156	Bos_taurus
ENSPREG00000012197	rnaseh1	89	35.793	WBGene00004382	rnh-1.0	95	35.793	Caenorhabditis_elegans
ENSPREG00000012197	rnaseh1	90	55.072	ENSCJAG00000035450	RNASEH1	90	55.072	Callithrix_jacchus
ENSPREG00000012197	rnaseh1	98	50.667	ENSCAFG00000003259	RNASEH1	98	50.667	Canis_familiaris
ENSPREG00000012197	rnaseh1	50	65.563	ENSCAFG00020004994	RNASEH1	97	65.563	Canis_lupus_dingo
ENSPREG00000012197	rnaseh1	99	52.787	ENSCHIG00000022264	-	99	52.787	Capra_hircus
ENSPREG00000012197	rnaseh1	83	45.312	ENSCHIG00000022230	-	99	45.312	Capra_hircus
ENSPREG00000012197	rnaseh1	90	54.015	ENSTSYG00000012926	RNASEH1	89	54.015	Carlito_syrichta
ENSPREG00000012197	rnaseh1	83	55.556	ENSCAPG00000004813	RNASEH1	97	55.556	Cavia_aperea
ENSPREG00000012197	rnaseh1	89	55.185	ENSCPOG00000022278	Rnaseh1	86	55.185	Cavia_porcellus
ENSPREG00000012197	rnaseh1	90	56.522	ENSCCAG00000038017	RNASEH1	90	56.522	Cebus_capucinus
ENSPREG00000012197	rnaseh1	90	50.185	ENSCATG00000016818	-	89	50.185	Cercocebus_atys
ENSPREG00000012197	rnaseh1	90	55.515	ENSCATG00000016515	-	90	55.515	Cercocebus_atys
ENSPREG00000012197	rnaseh1	89	55.185	ENSCLAG00000002440	RNASEH1	89	55.185	Chinchilla_lanigera
ENSPREG00000012197	rnaseh1	90	55.147	ENSCSAG00000006943	RNASEH1	90	55.147	Chlorocebus_sabaeus
ENSPREG00000012197	rnaseh1	58	63.068	ENSCHOG00000008547	RNASEH1	87	63.068	Choloepus_hoffmanni
ENSPREG00000012197	rnaseh1	90	54.710	ENSCPBG00000021620	RNASEH1	99	54.710	Chrysemys_picta_bellii
ENSPREG00000012197	rnaseh1	97	36.789	ENSCING00000014054	-	98	36.789	Ciona_intestinalis
ENSPREG00000012197	rnaseh1	76	36.402	ENSCSAVG00000000009	-	96	36.402	Ciona_savignyi
ENSPREG00000012197	rnaseh1	90	55.882	ENSCANG00000037763	RNASEH1	90	55.882	Colobus_angolensis_palliatus
ENSPREG00000012197	rnaseh1	90	55.882	ENSCGRG00001008950	Rnaseh1	90	56.827	Cricetulus_griseus_chok1gshd
ENSPREG00000012197	rnaseh1	90	55.882	ENSCGRG00000006029	Rnaseh1	90	56.827	Cricetulus_griseus_crigri
ENSPREG00000012197	rnaseh1	100	64.103	ENSCSEG00000005741	rnaseh1	95	67.845	Cynoglossus_semilaevis
ENSPREG00000012197	rnaseh1	100	80.731	ENSCVAG00000018717	rnaseh1	98	80.731	Cyprinodon_variegatus
ENSPREG00000012197	rnaseh1	91	64.643	ENSDARG00000042571	rnaseh1	98	64.643	Danio_rerio
ENSPREG00000012197	rnaseh1	90	55.311	ENSDNOG00000016056	RNASEH1	90	55.311	Dasypus_novemcinctus
ENSPREG00000012197	rnaseh1	90	54.779	ENSDORG00000000704	Rnaseh1	90	54.779	Dipodomys_ordii
ENSPREG00000012197	rnaseh1	91	39.731	FBgn0023171	rnh1	94	39.731	Drosophila_melanogaster
ENSPREG00000012197	rnaseh1	96	49.310	ENSETEG00000012674	RNASEH1	94	49.310	Echinops_telfairi
ENSPREG00000012197	rnaseh1	89	44.776	ENSEBUG00000006116	rnaseh1	77	44.776	Eptatretus_burgeri
ENSPREG00000012197	rnaseh1	90	46.233	ENSEBUG00000008898	rnaseh1	98	46.233	Eptatretus_burgeri
ENSPREG00000012197	rnaseh1	99	52.508	ENSEASG00005022200	RNASEH1	97	52.508	Equus_asinus_asinus
ENSPREG00000012197	rnaseh1	99	52.508	ENSECAG00000020695	RNASEH1	97	52.508	Equus_caballus
ENSPREG00000012197	rnaseh1	99	63.844	ENSELUG00000010112	rnaseh1	99	63.844	Esox_lucius
ENSPREG00000012197	rnaseh1	98	51.515	ENSFCAG00000025832	RNASEH1	98	51.515	Felis_catus
ENSPREG00000012197	rnaseh1	91	53.310	ENSFALG00000002069	RNASEH1	93	54.480	Ficedula_albicollis
ENSPREG00000012197	rnaseh1	89	52.941	ENSFDAG00000002035	RNASEH1	79	52.941	Fukomys_damarensis
ENSPREG00000012197	rnaseh1	99	63.907	ENSGMOG00000013818	rnaseh1	99	63.907	Gadus_morhua
ENSPREG00000012197	rnaseh1	91	54.152	ENSGALG00000016389	RNASEH1	93	54.152	Gallus_gallus
ENSPREG00000012197	rnaseh1	99	91.667	ENSGAFG00000001776	rnaseh1	99	91.667	Gambusia_affinis
ENSPREG00000012197	rnaseh1	100	68.543	ENSGACG00000011935	rnaseh1	99	68.543	Gasterosteus_aculeatus
ENSPREG00000012197	rnaseh1	90	54.710	ENSGAGG00000009150	RNASEH1	62	54.710	Gopherus_agassizii
ENSPREG00000012197	rnaseh1	90	56.250	ENSGGOG00000034822	RNASEH1	90	56.250	Gorilla_gorilla
ENSPREG00000012197	rnaseh1	100	71.569	ENSHBUG00000004666	rnaseh1	97	71.895	Haplochromis_burtoni
ENSPREG00000012197	rnaseh1	89	54.444	ENSHGLG00000002585	Rnaseh1	82	54.444	Heterocephalus_glaber_female
ENSPREG00000012197	rnaseh1	89	54.444	ENSHGLG00100005105	Rnaseh1	82	54.444	Heterocephalus_glaber_male
ENSPREG00000012197	rnaseh1	100	62.662	ENSHCOG00000012329	rnaseh1	97	63.636	Hippocampus_comes
ENSPREG00000012197	rnaseh1	100	56.623	ENSIPUG00000023060	rnaseh1	98	59.712	Ictalurus_punctatus
ENSPREG00000012197	rnaseh1	89	55.556	ENSSTOG00000012774	RNASEH1	91	55.556	Ictidomys_tridecemlineatus
ENSPREG00000012197	rnaseh1	82	53.441	ENSJJAG00000020238	Rnaseh1	90	53.441	Jaculus_jaculus
ENSPREG00000012197	rnaseh1	88	43.233	ENSJJAG00000008994	-	89	43.233	Jaculus_jaculus
ENSPREG00000012197	rnaseh1	90	49.265	ENSJJAG00000021481	-	89	49.265	Jaculus_jaculus
ENSPREG00000012197	rnaseh1	99	71.667	ENSKMAG00000001373	rnaseh1	98	71.667	Kryptolebias_marmoratus
ENSPREG00000012197	rnaseh1	99	64.883	ENSLBEG00000004480	rnaseh1	97	70.073	Labrus_bergylta
ENSPREG00000012197	rnaseh1	91	54.255	ENSLACG00000007100	RNASEH1	89	55.830	Latimeria_chalumnae
ENSPREG00000012197	rnaseh1	91	57.951	ENSLOCG00000017212	rnaseh1	98	57.951	Lepisosteus_oculatus
ENSPREG00000012197	rnaseh1	90	55.396	ENSLAFG00000015091	RNASEH1	90	55.396	Loxodonta_africana
ENSPREG00000012197	rnaseh1	92	46.897	ENSMFAG00000002323	-	91	46.897	Macaca_fascicularis
ENSPREG00000012197	rnaseh1	90	55.515	ENSMFAG00000000063	-	90	55.515	Macaca_fascicularis
ENSPREG00000012197	rnaseh1	92	47.241	ENSMMUG00000019280	-	91	47.241	Macaca_mulatta
ENSPREG00000012197	rnaseh1	92	47.241	ENSMNEG00000029676	-	91	47.241	Macaca_nemestrina
ENSPREG00000012197	rnaseh1	90	55.882	ENSMNEG00000040183	-	90	55.882	Macaca_nemestrina
ENSPREG00000012197	rnaseh1	98	48.220	ENSMLEG00000028662	-	97	48.220	Mandrillus_leucophaeus
ENSPREG00000012197	rnaseh1	84	55.512	ENSMLEG00000039352	-	98	55.512	Mandrillus_leucophaeus
ENSPREG00000012197	rnaseh1	100	68.874	ENSMAMG00000019725	rnaseh1	96	72.302	Mastacembelus_armatus
ENSPREG00000012197	rnaseh1	100	71.895	ENSMZEG00005013006	rnaseh1	97	72.222	Maylandia_zebra
ENSPREG00000012197	rnaseh1	81	53.200	ENSMGAG00000013979	RNASEH1	99	53.200	Meleagris_gallopavo
ENSPREG00000012197	rnaseh1	90	56.618	ENSMAUG00000014957	Rnaseh1	90	56.618	Mesocricetus_auratus
ENSPREG00000012197	rnaseh1	89	55.185	ENSMICG00000033156	RNASEH1	88	55.185	Microcebus_murinus
ENSPREG00000012197	rnaseh1	90	55.351	ENSMOCG00000015522	Rnaseh1	90	55.351	Microtus_ochrogaster
ENSPREG00000012197	rnaseh1	99	69.231	ENSMMOG00000015902	rnaseh1	97	69.231	Mola_mola
ENSPREG00000012197	rnaseh1	100	50.993	ENSMODG00000014491	-	99	50.993	Monodelphis_domestica
ENSPREG00000012197	rnaseh1	80	50.413	ENSMODG00000028814	-	91	50.413	Monodelphis_domestica
ENSPREG00000012197	rnaseh1	100	66.997	ENSMALG00000010565	rnaseh1	98	66.997	Monopterus_albus
ENSPREG00000012197	rnaseh1	90	55.147	MGP_CAROLIEiJ_G0017660	Rnaseh1	90	55.147	Mus_caroli
ENSPREG00000012197	rnaseh1	90	55.515	ENSMUSG00000020630	Rnaseh1	90	55.515	Mus_musculus
ENSPREG00000012197	rnaseh1	90	53.676	MGP_PahariEiJ_G0029418	Rnaseh1	90	54.982	Mus_pahari
ENSPREG00000012197	rnaseh1	90	54.286	MGP_SPRETEiJ_G0018502	Rnaseh1	90	54.286	Mus_spretus
ENSPREG00000012197	rnaseh1	58	60.227	ENSMPUG00000012984	RNASEH1	85	60.227	Mustela_putorius_furo
ENSPREG00000012197	rnaseh1	90	55.678	ENSNGAG00000015966	Rnaseh1	85	55.678	Nannospalax_galili
ENSPREG00000012197	rnaseh1	100	71.242	ENSNBRG00000008739	rnaseh1	97	71.569	Neolamprologus_brichardi
ENSPREG00000012197	rnaseh1	83	48.800	ENSNLEG00000000059	-	88	48.800	Nomascus_leucogenys
ENSPREG00000012197	rnaseh1	90	50.000	ENSNLEG00000015400	RNASEH1	88	50.000	Nomascus_leucogenys
ENSPREG00000012197	rnaseh1	99	36.333	ENSMEUG00000003610	-	99	36.333	Notamacropus_eugenii
ENSPREG00000012197	rnaseh1	97	54.545	ENSOPRG00000005072	RNASEH1	95	54.545	Ochotona_princeps
ENSPREG00000012197	rnaseh1	89	56.296	ENSODEG00000000235	Rnaseh1	86	56.296	Octodon_degus
ENSPREG00000012197	rnaseh1	92	75.532	ENSONIG00000018697	rnaseh1	99	75.532	Oreochromis_niloticus
ENSPREG00000012197	rnaseh1	90	56.410	ENSOCUG00000006117	RNASEH1	92	54.737	Oryctolagus_cuniculus
ENSPREG00000012197	rnaseh1	92	71.685	ENSORLG00000018127	rnaseh1	97	71.685	Oryzias_latipes
ENSPREG00000012197	rnaseh1	100	68.212	ENSORLG00020013660	rnaseh1	98	68.212	Oryzias_latipes_hni
ENSPREG00000012197	rnaseh1	100	68.212	ENSORLG00015011338	rnaseh1	98	68.212	Oryzias_latipes_hsok
ENSPREG00000012197	rnaseh1	91	66.423	ENSOMEG00000004710	rnaseh1	99	66.423	Oryzias_melastigma
ENSPREG00000012197	rnaseh1	90	55.474	ENSOGAG00000017176	RNASEH1	90	55.474	Otolemur_garnettii
ENSPREG00000012197	rnaseh1	99	46.667	ENSOARG00000005386	RNASEH1	99	46.667	Ovis_aries
ENSPREG00000012197	rnaseh1	90	55.515	ENSPPAG00000034221	RNASEH1	90	55.515	Pan_paniscus
ENSPREG00000012197	rnaseh1	99	51.171	ENSPPRG00000015513	RNASEH1	99	51.171	Panthera_pardus
ENSPREG00000012197	rnaseh1	84	54.724	ENSPTIG00000019034	RNASEH1	83	54.724	Panthera_tigris_altaica
ENSPREG00000012197	rnaseh1	83	49.804	ENSPTRG00000043403	-	91	49.804	Pan_troglodytes
ENSPREG00000012197	rnaseh1	90	55.515	ENSPTRG00000011614	RNASEH1	90	55.515	Pan_troglodytes
ENSPREG00000012197	rnaseh1	90	48.364	ENSPANG00000018246	-	89	48.364	Papio_anubis
ENSPREG00000012197	rnaseh1	90	54.779	ENSPANG00000000443	RNASEH1	98	54.688	Papio_anubis
ENSPREG00000012197	rnaseh1	92	58.333	ENSPKIG00000003146	rnaseh1	99	59.712	Paramormyrops_kingsleyae
ENSPREG00000012197	rnaseh1	90	53.818	ENSPSIG00000002937	RNASEH1	99	53.818	Pelodiscus_sinensis
ENSPREG00000012197	rnaseh1	98	61.616	ENSPMGG00000017463	rnaseh1	99	61.616	Periophthalmus_magnuspinnatus
ENSPREG00000012197	rnaseh1	90	53.846	ENSPEMG00000022465	-	90	55.720	Peromyscus_maniculatus_bairdii
ENSPREG00000012197	rnaseh1	51	34.839	ENSPCIG00000026047	-	87	34.839	Phascolarctos_cinereus
ENSPREG00000012197	rnaseh1	100	48.852	ENSPCIG00000023334	-	99	48.852	Phascolarctos_cinereus
ENSPREG00000012197	rnaseh1	100	93.688	ENSPFOG00000002841	rnaseh1	100	93.688	Poecilia_formosa
ENSPREG00000012197	rnaseh1	75	76.991	ENSPLAG00000021349	-	85	76.991	Poecilia_latipinna
ENSPREG00000012197	rnaseh1	100	94.020	ENSPMEG00000016826	rnaseh1	100	94.020	Poecilia_mexicana
ENSPREG00000012197	rnaseh1	90	45.588	ENSPPYG00000025873	RNASEH1	88	45.588	Pongo_abelii
ENSPREG00000012197	rnaseh1	83	52.400	ENSPPYG00000008067	-	90	52.400	Pongo_abelii
ENSPREG00000012197	rnaseh1	91	54.015	ENSPCAG00000002500	RNASEH1	90	54.015	Procavia_capensis
ENSPREG00000012197	rnaseh1	90	49.638	ENSPCOG00000019444	RNASEH1	89	49.638	Propithecus_coquereli
ENSPREG00000012197	rnaseh1	97	50.000	ENSPVAG00000002070	RNASEH1	95	50.000	Pteropus_vampyrus
ENSPREG00000012197	rnaseh1	100	71.242	ENSPNYG00000001292	rnaseh1	97	71.569	Pundamilia_nyererei
ENSPREG00000012197	rnaseh1	99	59.150	ENSPNAG00000022344	rnaseh1	99	59.150	Pygocentrus_nattereri
ENSPREG00000012197	rnaseh1	90	54.613	ENSRNOG00000008584	Rnaseh1	90	54.839	Rattus_norvegicus
ENSPREG00000012197	rnaseh1	90	55.882	ENSRBIG00000034222	RNASEH1	89	55.882	Rhinopithecus_bieti
ENSPREG00000012197	rnaseh1	90	55.147	ENSRROG00000041761	RNASEH1	89	55.147	Rhinopithecus_roxellana
ENSPREG00000012197	rnaseh1	90	52.273	YMR234W	-	85	52.273	Saccharomyces_cerevisiae
ENSPREG00000012197	rnaseh1	89	56.569	ENSSBOG00000025411	RNASEH1	89	56.569	Saimiri_boliviensis_boliviensis
ENSPREG00000012197	rnaseh1	100	52.787	ENSSHAG00000013051	RNASEH1	98	52.787	Sarcophilus_harrisii
ENSPREG00000012197	rnaseh1	99	59.211	ENSSFOG00015002709	rnaseh1	98	59.211	Scleropages_formosus
ENSPREG00000012197	rnaseh1	99	68.792	ENSSMAG00000007586	rnaseh1	96	68.792	Scophthalmus_maximus
ENSPREG00000012197	rnaseh1	96	70.242	ENSSDUG00000008217	rnaseh1	94	72.527	Seriola_dumerili
ENSPREG00000012197	rnaseh1	89	69.030	ENSSLDG00000000442	rnaseh1	95	71.206	Seriola_lalandi_dorsalis
ENSPREG00000012197	rnaseh1	91	54.380	ENSSPUG00000006644	RNASEH1	93	54.380	Sphenodon_punctatus
ENSPREG00000012197	rnaseh1	99	71.141	ENSSPAG00000009353	rnaseh1	96	71.141	Stegastes_partitus
ENSPREG00000012197	rnaseh1	91	56.727	ENSSSCG00000025305	RNASEH1	99	53.642	Sus_scrofa
ENSPREG00000012197	rnaseh1	91	55.357	ENSTGUG00000012980	RNASEH1	93	55.357	Taeniopygia_guttata
ENSPREG00000012197	rnaseh1	95	70.139	ENSTRUG00000015774	rnaseh1	96	71.739	Takifugu_rubripes
ENSPREG00000012197	rnaseh1	91	72.000	ENSTNIG00000010715	rnaseh1	96	72.000	Tetraodon_nigroviridis
ENSPREG00000012197	rnaseh1	91	54.545	ENSTTRG00000001615	RNASEH1	90	54.545	Tursiops_truncatus
ENSPREG00000012197	rnaseh1	50	64.901	ENSUAMG00000018254	RNASEH1	78	64.901	Ursus_americanus
ENSPREG00000012197	rnaseh1	70	51.163	ENSUMAG00000003941	RNASEH1	65	51.163	Ursus_maritimus
ENSPREG00000012197	rnaseh1	99	46.512	ENSVPAG00000011589	RNASEH1	99	46.512	Vicugna_pacos
ENSPREG00000012197	rnaseh1	98	51.667	ENSVVUG00000008633	RNASEH1	88	51.667	Vulpes_vulpes
ENSPREG00000012197	rnaseh1	71	50.993	ENSXETG00000030371	-	99	50.993	Xenopus_tropicalis
ENSPREG00000012197	rnaseh1	90	56.364	ENSXETG00000001212	rnaseh1	99	50.323	Xenopus_tropicalis
ENSPREG00000012197	rnaseh1	99	91.639	ENSXMAG00000002357	rnaseh1	99	91.639	Xiphophorus_maculatus