EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000012235 (Gene tree)
Gene ID: 103465246
Gene Symbol: eefsec
Alias: zgc:123265
Full Name: eukaryotic elongation factor%2C selenocysteine-tRNA specific
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 15318 bases
Position: chrLG5:24436985-24452302
Accession: 103465246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000018091	GTP_EFTU	PF00009.27	8.6e-30	1	1
ENSPREP00000018106	GTP_EFTU	PF00009.27	8.7e-30	1	1
ENSPREP00000018091	MMR_HSR1	PF01926.23	1.3e-06	1	1
ENSPREP00000018106	MMR_HSR1	PF01926.23	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000018287	-	1728	-	ENSPREP00000018091	575 (aa)	-	-
ENSPRET00000018302	-	2423	XM_008409888	ENSPREP00000018106	577 (aa)	XP_008408110	UPI0004A34128

Gene Model

Click here to download ENSPREG00000012235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000012235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000012235	eefsec	99	62.000	ENSG00000132394	EEFSEC	97	69.712	Homo_sapiens
ENSPREG00000012235	eefsec	100	89.255	ENSAPOG00000015931	eefsec	100	89.255	Acanthochromis_polyacanthus
ENSPREG00000012235	eefsec	79	61.017	ENSAMEG00000015165	EEFSEC	88	63.146	Ailuropoda_melanoleuca
ENSPREG00000012235	eefsec	65	89.850	ENSACIG00000022407	eefsec	99	93.676	Amphilophus_citrinellus
ENSPREG00000012235	eefsec	100	88.735	ENSAOCG00000008603	eefsec	100	88.735	Amphiprion_ocellaris
ENSPREG00000012235	eefsec	100	88.699	ENSAPEG00000017090	eefsec	100	88.699	Amphiprion_percula
ENSPREG00000012235	eefsec	100	88.889	ENSATEG00000002753	eefsec	100	88.376	Anabas_testudineus
ENSPREG00000012235	eefsec	73	68.519	ENSAPLG00000006745	EEFSEC	99	68.519	Anas_platyrhynchos
ENSPREG00000012235	eefsec	99	61.371	ENSANAG00000032691	EEFSEC	98	67.788	Aotus_nancymaae
ENSPREG00000012235	eefsec	100	88.889	ENSACLG00000024565	eefsec	100	94.231	Astatotilapia_calliptera
ENSPREG00000012235	eefsec	99	73.868	ENSAMXG00000002260	eefsec	98	73.868	Astyanax_mexicanus
ENSPREG00000012235	eefsec	99	63.575	ENSBTAG00000030962	EEFSEC	99	69.804	Bos_taurus
ENSPREG00000012235	eefsec	88	33.077	WBGene00008133	efsc-1	94	32.392	Caenorhabditis_elegans
ENSPREG00000012235	eefsec	99	61.204	ENSCJAG00000005387	EEFSEC	98	67.788	Callithrix_jacchus
ENSPREG00000012235	eefsec	99	62.023	ENSCAFG00000004135	EEFSEC	80	61.921	Canis_familiaris
ENSPREG00000012235	eefsec	99	62.023	ENSCAFG00020004811	EEFSEC	99	61.921	Canis_lupus_dingo
ENSPREG00000012235	eefsec	99	62.775	ENSCHIG00000021838	EEFSEC	99	62.669	Capra_hircus
ENSPREG00000012235	eefsec	99	62.667	ENSTSYG00000012922	EEFSEC	99	62.562	Carlito_syrichta
ENSPREG00000012235	eefsec	83	56.883	ENSCAPG00000000084	EEFSEC	98	56.883	Cavia_aperea
ENSPREG00000012235	eefsec	99	63.095	ENSCPOG00000024352	EEFSEC	99	62.988	Cavia_porcellus
ENSPREG00000012235	eefsec	99	61.204	ENSCCAG00000031336	EEFSEC	98	67.308	Cebus_capucinus
ENSPREG00000012235	eefsec	99	61.833	ENSCATG00000019414	EEFSEC	98	68.750	Cercocebus_atys
ENSPREG00000012235	eefsec	99	62.862	ENSCLAG00000006973	EEFSEC	99	62.755	Chinchilla_lanigera
ENSPREG00000012235	eefsec	99	61.667	ENSCSAG00000008599	EEFSEC	99	61.564	Chlorocebus_sabaeus
ENSPREG00000012235	eefsec	99	66.952	ENSCPBG00000014356	EEFSEC	86	69.732	Chrysemys_picta_bellii
ENSPREG00000012235	eefsec	98	57.544	ENSCSAVG00000002208	-	99	60.473	Ciona_savignyi
ENSPREG00000012235	eefsec	99	61.770	ENSCANG00000031492	EEFSEC	98	68.750	Colobus_angolensis_palliatus
ENSPREG00000012235	eefsec	99	62.500	ENSCGRG00001018089	Eefsec	99	62.500	Cricetulus_griseus_chok1gshd
ENSPREG00000012235	eefsec	98	62.415	ENSCGRG00000010063	Eefsec	99	62.415	Cricetulus_griseus_crigri
ENSPREG00000012235	eefsec	100	86.054	ENSCSEG00000003008	eefsec	99	89.888	Cynoglossus_semilaevis
ENSPREG00000012235	eefsec	100	92.042	ENSCVAG00000005381	eefsec	100	92.388	Cyprinodon_variegatus
ENSPREG00000012235	eefsec	100	74.957	ENSDARG00000004696	eefsec	100	74.957	Danio_rerio
ENSPREG00000012235	eefsec	99	62.542	ENSDNOG00000008925	EEFSEC	99	62.437	Dasypus_novemcinctus
ENSPREG00000012235	eefsec	83	53.535	ENSDORG00000000264	Eefsec	100	66.667	Dipodomys_ordii
ENSPREG00000012235	eefsec	98	48.233	FBgn0034627	eEFSec	95	51.257	Drosophila_melanogaster
ENSPREG00000012235	eefsec	99	55.892	ENSETEG00000007406	EEFSEC	99	55.798	Echinops_telfairi
ENSPREG00000012235	eefsec	71	74.490	ENSEBUG00000015029	eefsec	82	70.588	Eptatretus_burgeri
ENSPREG00000012235	eefsec	99	62.709	ENSEASG00005006786	EEFSEC	99	62.604	Equus_asinus_asinus
ENSPREG00000012235	eefsec	99	62.709	ENSECAG00000016565	EEFSEC	99	62.604	Equus_caballus
ENSPREG00000012235	eefsec	99	81.675	ENSELUG00000016632	eefsec	98	80.348	Esox_lucius
ENSPREG00000012235	eefsec	99	62.667	ENSFCAG00000006153	EEFSEC	99	62.895	Felis_catus
ENSPREG00000012235	eefsec	83	66.531	ENSFALG00000007901	EEFSEC	99	66.531	Ficedula_albicollis
ENSPREG00000012235	eefsec	83	61.538	ENSFDAG00000010243	EEFSEC	99	68.000	Fukomys_damarensis
ENSPREG00000012235	eefsec	100	93.599	ENSFHEG00000007155	eefsec	100	93.253	Fundulus_heteroclitus
ENSPREG00000012235	eefsec	99	78.185	ENSGMOG00000007705	eefsec	100	79.066	Gadus_morhua
ENSPREG00000012235	eefsec	99	67.869	ENSGALG00000038684	EEFSEC	99	67.869	Gallus_gallus
ENSPREG00000012235	eefsec	100	96.187	ENSGAFG00000021692	eefsec	100	96.187	Gambusia_affinis
ENSPREG00000012235	eefsec	99	88.522	ENSGACG00000000793	eefsec	99	88.174	Gasterosteus_aculeatus
ENSPREG00000012235	eefsec	99	67.295	ENSGAGG00000002059	EEFSEC	98	67.808	Gopherus_agassizii
ENSPREG00000012235	eefsec	86	62.209	ENSGGOG00000001445	EEFSEC	95	74.603	Gorilla_gorilla
ENSPREG00000012235	eefsec	100	89.273	ENSHBUG00000008917	eefsec	100	89.231	Haplochromis_burtoni
ENSPREG00000012235	eefsec	99	62.585	ENSHGLG00000000094	EEFSEC	99	68.000	Heterocephalus_glaber_female
ENSPREG00000012235	eefsec	98	62.393	ENSHGLG00100011393	EEFSEC	95	62.287	Heterocephalus_glaber_male
ENSPREG00000012235	eefsec	99	83.160	ENSHCOG00000004193	eefsec	99	82.986	Hippocampus_comes
ENSPREG00000012235	eefsec	99	72.997	ENSIPUG00000017291	eefsec	98	73.684	Ictalurus_punctatus
ENSPREG00000012235	eefsec	83	62.069	ENSSTOG00000019802	EEFSEC	99	62.069	Ictidomys_tridecemlineatus
ENSPREG00000012235	eefsec	100	91.522	ENSKMAG00000019907	eefsec	100	91.176	Kryptolebias_marmoratus
ENSPREG00000012235	eefsec	100	88.985	ENSLBEG00000017908	eefsec	100	88.468	Labrus_bergylta
ENSPREG00000012235	eefsec	85	71.888	ENSLACG00000013137	EEFSEC	95	71.888	Latimeria_chalumnae
ENSPREG00000012235	eefsec	99	76.801	ENSLOCG00000014535	eefsec	98	75.880	Lepisosteus_oculatus
ENSPREG00000012235	eefsec	99	60.307	ENSLAFG00000001997	EEFSEC	99	61.054	Loxodonta_africana
ENSPREG00000012235	eefsec	99	61.833	ENSMFAG00000042128	EEFSEC	99	68.750	Macaca_fascicularis
ENSPREG00000012235	eefsec	82	59.918	ENSMMUG00000018663	EEFSEC	98	68.269	Macaca_mulatta
ENSPREG00000012235	eefsec	99	61.667	ENSMNEG00000028574	EEFSEC	98	68.750	Macaca_nemestrina
ENSPREG00000012235	eefsec	83	60.400	ENSMLEG00000041771	EEFSEC	93	60.359	Mandrillus_leucophaeus
ENSPREG00000012235	eefsec	100	88.356	ENSMAMG00000023964	eefsec	99	89.474	Mastacembelus_armatus
ENSPREG00000012235	eefsec	67	90.476	ENSMZEG00005009380	eefsec	100	94.231	Maylandia_zebra
ENSPREG00000012235	eefsec	66	66.158	ENSMGAG00000007243	EEFSEC	100	66.158	Meleagris_gallopavo
ENSPREG00000012235	eefsec	89	64.151	ENSMAUG00000011197	Eefsec	93	69.721	Mesocricetus_auratus
ENSPREG00000012235	eefsec	99	62.331	ENSMOCG00000017748	Eefsec	93	69.721	Microtus_ochrogaster
ENSPREG00000012235	eefsec	65	90.226	ENSMMOG00000021820	eefsec	99	90.226	Mola_mola
ENSPREG00000012235	eefsec	89	65.794	ENSMODG00000008034	EEFSEC	81	65.672	Monodelphis_domestica
ENSPREG00000012235	eefsec	98	87.719	ENSMALG00000016211	eefsec	98	89.709	Monopterus_albus
ENSPREG00000012235	eefsec	99	62.098	MGP_CAROLIEiJ_G0028627	Eefsec	98	67.200	Mus_caroli
ENSPREG00000012235	eefsec	99	62.881	ENSMUSG00000033216	Eefsec	98	67.200	Mus_musculus
ENSPREG00000012235	eefsec	99	62.838	MGP_PahariEiJ_G0022366	Eefsec	98	67.200	Mus_pahari
ENSPREG00000012235	eefsec	99	62.669	MGP_SPRETEiJ_G0029640	Eefsec	98	67.200	Mus_spretus
ENSPREG00000012235	eefsec	99	62.063	ENSMPUG00000017340	EEFSEC	95	62.270	Mustela_putorius_furo
ENSPREG00000012235	eefsec	83	60.800	ENSMLUG00000004261	EEFSEC	99	60.800	Myotis_lucifugus
ENSPREG00000012235	eefsec	100	88.718	ENSNBRG00000002387	eefsec	100	93.462	Neolamprologus_brichardi
ENSPREG00000012235	eefsec	99	61.500	ENSNLEG00000014303	EEFSEC	97	68.750	Nomascus_leucogenys
ENSPREG00000012235	eefsec	83	63.934	ENSMEUG00000005747	EEFSEC	99	63.934	Notamacropus_eugenii
ENSPREG00000012235	eefsec	98	63.575	ENSOPRG00000011276	EEFSEC	99	63.575	Ochotona_princeps
ENSPREG00000012235	eefsec	99	62.479	ENSODEG00000002928	EEFSEC	99	62.479	Octodon_degus
ENSPREG00000012235	eefsec	82	88.889	ENSONIG00000019038	eefsec	100	88.679	Oreochromis_niloticus
ENSPREG00000012235	eefsec	82	64.938	ENSOANG00000009108	EEFSEC	99	64.108	Ornithorhynchus_anatinus
ENSPREG00000012235	eefsec	98	63.744	ENSOCUG00000016517	EEFSEC	99	63.744	Oryctolagus_cuniculus
ENSPREG00000012235	eefsec	100	86.505	ENSORLG00000001377	eefsec	100	92.248	Oryzias_latipes
ENSPREG00000012235	eefsec	100	86.159	ENSORLG00020000729	eefsec	100	92.248	Oryzias_latipes_hni
ENSPREG00000012235	eefsec	100	86.505	ENSORLG00015001986	eefsec	100	86.505	Oryzias_latipes_hsok
ENSPREG00000012235	eefsec	83	84.407	ENSOMEG00000010071	eefsec	88	84.486	Oryzias_melastigma
ENSPREG00000012235	eefsec	73	63.927	ENSOGAG00000014084	EEFSEC	97	63.927	Otolemur_garnettii
ENSPREG00000012235	eefsec	63	60.995	ENSOARG00000004600	EEFSEC	100	60.995	Ovis_aries
ENSPREG00000012235	eefsec	99	61.809	ENSPPAG00000030936	EEFSEC	99	68.900	Pan_paniscus
ENSPREG00000012235	eefsec	99	63.105	ENSPPRG00000002846	EEFSEC	99	63.105	Panthera_pardus
ENSPREG00000012235	eefsec	85	61.209	ENSPTIG00000013855	EEFSEC	92	61.209	Panthera_tigris_altaica
ENSPREG00000012235	eefsec	99	61.809	ENSPTRG00000015353	EEFSEC	97	69.231	Pan_troglodytes
ENSPREG00000012235	eefsec	99	61.833	ENSPANG00000017041	EEFSEC	98	68.750	Papio_anubis
ENSPREG00000012235	eefsec	99	76.817	ENSPKIG00000005220	eefsec	97	81.061	Paramormyrops_kingsleyae
ENSPREG00000012235	eefsec	88	69.364	ENSPSIG00000015135	EEFSEC	98	69.157	Pelodiscus_sinensis
ENSPREG00000012235	eefsec	99	83.770	ENSPMGG00000020300	eefsec	99	83.770	Periophthalmus_magnuspinnatus
ENSPREG00000012235	eefsec	99	62.606	ENSPEMG00000013677	Eefsec	93	69.323	Peromyscus_maniculatus_bairdii
ENSPREG00000012235	eefsec	89	68.061	ENSPMAG00000006779	eefsec	98	68.251	Petromyzon_marinus
ENSPREG00000012235	eefsec	82	63.299	ENSPCIG00000020494	EEFSEC	99	62.680	Phascolarctos_cinereus
ENSPREG00000012235	eefsec	100	97.574	ENSPFOG00000003748	eefsec	100	97.574	Poecilia_formosa
ENSPREG00000012235	eefsec	99	97.552	ENSPLAG00000018012	eefsec	99	97.552	Poecilia_latipinna
ENSPREG00000012235	eefsec	100	97.574	ENSPMEG00000001202	eefsec	100	97.574	Poecilia_mexicana
ENSPREG00000012235	eefsec	99	61.603	ENSPPYG00000013436	EEFSEC	99	61.398	Pongo_abelii
ENSPREG00000012235	eefsec	88	57.197	ENSPCAG00000005883	EEFSEC	99	57.089	Procavia_capensis
ENSPREG00000012235	eefsec	99	61.720	ENSPCOG00000023432	EEFSEC	97	68.137	Propithecus_coquereli
ENSPREG00000012235	eefsec	65	66.795	ENSPVAG00000007070	EEFSEC	65	66.538	Pteropus_vampyrus
ENSPREG00000012235	eefsec	100	88.547	ENSPNYG00000005726	eefsec	100	93.846	Pundamilia_nyererei
ENSPREG00000012235	eefsec	99	74.306	ENSPNAG00000016724	eefsec	99	74.132	Pygocentrus_nattereri
ENSPREG00000012235	eefsec	99	62.881	ENSRNOG00000012954	Eefsec	99	69.721	Rattus_norvegicus
ENSPREG00000012235	eefsec	99	61.873	ENSRBIG00000032635	EEFSEC	98	68.750	Rhinopithecus_bieti
ENSPREG00000012235	eefsec	82	59.714	ENSSBOG00000031478	EEFSEC	99	68.182	Saimiri_boliviensis_boliviensis
ENSPREG00000012235	eefsec	82	63.711	ENSSHAG00000014760	EEFSEC	99	62.887	Sarcophilus_harrisii
ENSPREG00000012235	eefsec	99	75.552	ENSSFOG00015021109	eefsec	98	75.042	Scleropages_formosus
ENSPREG00000012235	eefsec	99	87.326	ENSSMAG00000001454	eefsec	99	87.500	Scophthalmus_maximus
ENSPREG00000012235	eefsec	100	89.590	ENSSDUG00000007924	eefsec	99	90.625	Seriola_dumerili
ENSPREG00000012235	eefsec	98	89.199	ENSSLDG00000024985	eefsec	99	89.085	Seriola_lalandi_dorsalis
ENSPREG00000012235	eefsec	51	73.469	ENSSARG00000003789	-	55	73.469	Sorex_araneus
ENSPREG00000012235	eefsec	82	65.696	ENSSPUG00000004191	EEFSEC	100	66.042	Sphenodon_punctatus
ENSPREG00000012235	eefsec	100	88.870	ENSSPAG00000001320	eefsec	99	90.602	Stegastes_partitus
ENSPREG00000012235	eefsec	99	63.069	ENSSSCG00000011619	EEFSEC	99	65.818	Sus_scrofa
ENSPREG00000012235	eefsec	99	66.610	ENSTGUG00000007895	EEFSEC	99	66.610	Taeniopygia_guttata
ENSPREG00000012235	eefsec	99	86.919	ENSTRUG00000010327	eefsec	99	86.403	Takifugu_rubripes
ENSPREG00000012235	eefsec	99	85.492	ENSTNIG00000003225	eefsec	99	85.147	Tetraodon_nigroviridis
ENSPREG00000012235	eefsec	99	62.395	ENSTTRG00000000994	EEFSEC	99	62.669	Tursiops_truncatus
ENSPREG00000012235	eefsec	99	62.814	ENSUAMG00000017283	EEFSEC	99	62.709	Ursus_americanus
ENSPREG00000012235	eefsec	72	63.594	ENSVVUG00000018372	EEFSEC	90	63.594	Vulpes_vulpes
ENSPREG00000012235	eefsec	80	68.577	ENSXETG00000002066	eefsec	99	68.577	Xenopus_tropicalis
ENSPREG00000012235	eefsec	100	96.522	ENSXCOG00000019916	eefsec	100	96.522	Xiphophorus_couchianus
ENSPREG00000012235	eefsec	100	97.054	ENSXMAG00000001839	eefsec	100	97.054	Xiphophorus_maculatus