EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000012412 (Gene tree)
Gene ID: 103475541
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 29077 bases
Position: chrLG14:6056646-6085722
Accession: 103475541
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000018416	Exo_endo_phos	PF03372.23	1.8e-14	1	1
ENSPREP00000018362	DUF1866	PF08952.11	4.6e-56	1	1
ENSPREP00000018332	DUF1866	PF08952.11	4.6e-56	1	1
ENSPREP00000018479	DUF1866	PF08952.11	4.7e-56	1	1
ENSPREP00000018416	DUF1866	PF08952.11	8.4e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000018680	-	4911	XM_008427240	ENSPREP00000018479	1636 (aa)	XP_008425462	-
ENSPRET00000018530	-	4914	XM_008427247	ENSPREP00000018332	1625 (aa)	XP_008425469	UPI0004A47422
ENSPRET00000018617	-	4008	XM_017308603	ENSPREP00000018416	1322 (aa)	XP_017164092	-
ENSPRET00000018561	-	4890	-	ENSPREP00000018362	1617 (aa)	-	-

Gene Model

Click here to download ENSPREG00000012412's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret00562	Inositol phosphate metabolism	KEGG
pret01100	Metabolic pathways	KEGG
pret04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000012412's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000012412	synj1	99	67.713	ENSG00000159082	SYNJ1	100	82.927	Homo_sapiens
ENSPREG00000012412	synj1	100	88.698	ENSAPOG00000002809	synj1	100	87.695	Acanthochromis_polyacanthus
ENSPREG00000012412	synj1	94	68.894	ENSAMEG00000015028	SYNJ1	68	76.208	Ailuropoda_melanoleuca
ENSPREG00000012412	synj1	99	87.085	ENSACIG00000008857	synj1	99	87.939	Amphilophus_citrinellus
ENSPREG00000012412	synj1	100	89.596	ENSAOCG00000009835	synj1	100	88.166	Amphiprion_ocellaris
ENSPREG00000012412	synj1	100	88.200	ENSAPEG00000021010	synj1	99	84.303	Amphiprion_percula
ENSPREG00000012412	synj1	100	87.509	ENSATEG00000002306	synj1	99	83.374	Anabas_testudineus
ENSPREG00000012412	synj1	91	68.864	ENSAPLG00000011832	SYNJ1	68	75.938	Anas_platyrhynchos
ENSPREG00000012412	synj1	91	71.065	ENSACAG00000003006	-	84	77.545	Anolis_carolinensis
ENSPREG00000012412	synj1	96	68.826	ENSANAG00000027325	SYNJ1	99	68.802	Aotus_nancymaae
ENSPREG00000012412	synj1	100	90.090	ENSACLG00000002255	synj1	100	89.565	Astatotilapia_calliptera
ENSPREG00000012412	synj1	99	82.264	ENSAMXG00000008208	synj1	84	83.591	Astyanax_mexicanus
ENSPREG00000012412	synj1	98	69.317	ENSBTAG00000003063	SYNJ1	99	67.141	Bos_taurus
ENSPREG00000012412	synj1	97	68.683	ENSCJAG00000009187	SYNJ1	99	67.370	Callithrix_jacchus
ENSPREG00000012412	synj1	96	67.727	ENSCAFG00000009041	SYNJ1	99	69.108	Canis_familiaris
ENSPREG00000012412	synj1	96	68.221	ENSCAFG00020025776	SYNJ1	84	75.934	Canis_lupus_dingo
ENSPREG00000012412	synj1	99	69.283	ENSCHIG00000005095	SYNJ1	84	68.374	Capra_hircus
ENSPREG00000012412	synj1	98	68.033	ENSTSYG00000014541	SYNJ1	99	66.866	Carlito_syrichta
ENSPREG00000012412	synj1	92	59.855	ENSCAPG00000014483	SYNJ1	75	66.635	Cavia_aperea
ENSPREG00000012412	synj1	96	69.344	ENSCPOG00000012182	SYNJ1	100	66.569	Cavia_porcellus
ENSPREG00000012412	synj1	97	68.244	ENSCCAG00000020825	SYNJ1	99	67.219	Cebus_capucinus
ENSPREG00000012412	synj1	95	69.850	ENSCATG00000033891	SYNJ1	99	69.833	Cercocebus_atys
ENSPREG00000012412	synj1	97	66.742	ENSCLAG00000009796	SYNJ1	100	82.302	Chinchilla_lanigera
ENSPREG00000012412	synj1	97	67.793	ENSCSAG00000009654	SYNJ1	83	76.251	Chlorocebus_sabaeus
ENSPREG00000012412	synj1	74	72.491	ENSCHOG00000012390	SYNJ1	54	72.897	Choloepus_hoffmanni
ENSPREG00000012412	synj1	90	73.169	ENSCPBG00000006402	SYNJ1	96	69.416	Chrysemys_picta_bellii
ENSPREG00000012412	synj1	95	68.947	ENSCANG00000031359	SYNJ1	84	76.251	Colobus_angolensis_palliatus
ENSPREG00000012412	synj1	98	69.114	ENSCGRG00001010861	Synj1	100	66.225	Cricetulus_griseus_chok1gshd
ENSPREG00000012412	synj1	100	66.594	ENSCGRG00000015749	Synj1	100	82.158	Cricetulus_griseus_crigri
ENSPREG00000012412	synj1	95	88.624	ENSCSEG00000019614	synj1	98	90.143	Cynoglossus_semilaevis
ENSPREG00000012412	synj1	100	92.291	ENSCVAG00000019250	synj1	100	92.068	Cyprinodon_variegatus
ENSPREG00000012412	synj1	100	81.879	ENSDARG00000025011	synj1	100	83.396	Danio_rerio
ENSPREG00000012412	synj1	94	66.207	ENSDNOG00000010732	SYNJ1	70	72.983	Dasypus_novemcinctus
ENSPREG00000012412	synj1	53	80.654	ENSDORG00000014735	-	100	82.014	Dipodomys_ordii
ENSPREG00000012412	synj1	83	77.778	ENSETEG00000018674	SYNJ1	59	77.778	Echinops_telfairi
ENSPREG00000012412	synj1	99	69.259	ENSEASG00005006287	SYNJ1	98	77.789	Equus_asinus_asinus
ENSPREG00000012412	synj1	99	69.219	ENSECAG00000004829	SYNJ1	99	69.383	Equus_caballus
ENSPREG00000012412	synj1	91	71.028	ENSEEUG00000005150	SYNJ1	62	71.028	Erinaceus_europaeus
ENSPREG00000012412	synj1	100	76.383	ENSELUG00000009731	synj1	99	74.688	Esox_lucius
ENSPREG00000012412	synj1	98	68.787	ENSFCAG00000012498	SYNJ1	100	66.345	Felis_catus
ENSPREG00000012412	synj1	74	59.507	ENSFALG00000004680	SYNJ1	61	69.725	Ficedula_albicollis
ENSPREG00000012412	synj1	96	67.879	ENSFDAG00000016818	SYNJ1	100	82.302	Fukomys_damarensis
ENSPREG00000012412	synj1	100	90.639	ENSFHEG00000017689	synj1	99	87.462	Fundulus_heteroclitus
ENSPREG00000012412	synj1	79	85.233	ENSGMOG00000014852	synj1	83	85.113	Gadus_morhua
ENSPREG00000012412	synj1	96	68.466	ENSGALG00000034317	SYNJ1	83	68.155	Gallus_gallus
ENSPREG00000012412	synj1	100	94.626	ENSGAFG00000019466	synj1	100	95.182	Gambusia_affinis
ENSPREG00000012412	synj1	99	82.436	ENSGACG00000020575	synj1	99	84.314	Gasterosteus_aculeatus
ENSPREG00000012412	synj1	96	70.370	ENSGAGG00000022523	SYNJ1	82	76.627	Gopherus_agassizii
ENSPREG00000012412	synj1	96	68.745	ENSGGOG00000015945	SYNJ1	99	69.909	Gorilla_gorilla
ENSPREG00000012412	synj1	100	90.165	ENSHBUG00000007774	synj1	100	89.640	Haplochromis_burtoni
ENSPREG00000012412	synj1	100	68.390	ENSHGLG00000006420	SYNJ1	100	82.014	Heterocephalus_glaber_female
ENSPREG00000012412	synj1	99	68.370	ENSHGLG00100012591	SYNJ1	100	82.014	Heterocephalus_glaber_male
ENSPREG00000012412	synj1	95	93.186	ENSHCOG00000012774	synj1	96	93.788	Hippocampus_comes
ENSPREG00000012412	synj1	98	82.992	ENSIPUG00000010691	SYNJ1	84	82.111	Ictalurus_punctatus
ENSPREG00000012412	synj1	98	67.110	ENSSTOG00000015806	SYNJ1	83	76.208	Ictidomys_tridecemlineatus
ENSPREG00000012412	synj1	98	61.880	ENSJJAG00000020168	Synj1	83	61.459	Jaculus_jaculus
ENSPREG00000012412	synj1	100	80.159	ENSKMAG00000004221	synj1	93	88.198	Kryptolebias_marmoratus
ENSPREG00000012412	synj1	100	84.981	ENSLBEG00000015081	synj1	99	83.802	Labrus_bergylta
ENSPREG00000012412	synj1	99	67.539	ENSLACG00000005928	SYNJ1	70	75.790	Latimeria_chalumnae
ENSPREG00000012412	synj1	97	73.080	ENSLOCG00000009230	synj1	91	73.242	Lepisosteus_oculatus
ENSPREG00000012412	synj1	97	66.767	ENSLAFG00000011806	SYNJ1	69	75.843	Loxodonta_africana
ENSPREG00000012412	synj1	97	66.464	ENSMFAG00000018883	SYNJ1	84	75.023	Macaca_fascicularis
ENSPREG00000012412	synj1	99	67.009	ENSMMUG00000004624	SYNJ1	83	76.225	Macaca_mulatta
ENSPREG00000012412	synj1	99	67.730	ENSMNEG00000040077	SYNJ1	79	76.251	Macaca_nemestrina
ENSPREG00000012412	synj1	99	67.582	ENSMLEG00000037029	SYNJ1	100	67.302	Mandrillus_leucophaeus
ENSPREG00000012412	synj1	100	87.932	ENSMAMG00000013404	synj1	99	84.029	Mastacembelus_armatus
ENSPREG00000012412	synj1	100	88.972	ENSMZEG00005024358	synj1	100	89.251	Maylandia_zebra
ENSPREG00000012412	synj1	93	67.555	ENSMGAG00000014522	SYNJ1	84	65.675	Meleagris_gallopavo
ENSPREG00000012412	synj1	100	66.667	ENSMAUG00000009743	Synj1	100	82.014	Mesocricetus_auratus
ENSPREG00000012412	synj1	96	70.198	ENSMICG00000034953	SYNJ1	99	70.481	Microcebus_murinus
ENSPREG00000012412	synj1	99	80.602	ENSMMOG00000010203	synj1	99	84.158	Mola_mola
ENSPREG00000012412	synj1	88	68.391	ENSMODG00000021073	SYNJ1	82	72.202	Monodelphis_domestica
ENSPREG00000012412	synj1	100	87.961	ENSMALG00000014015	synj1	83	87.473	Monopterus_albus
ENSPREG00000012412	synj1	98	67.457	MGP_CAROLIEiJ_G0020951	Synj1	100	82.302	Mus_caroli
ENSPREG00000012412	synj1	98	67.680	ENSMUSG00000022973	Synj1	100	82.158	Mus_musculus
ENSPREG00000012412	synj1	98	67.235	MGP_PahariEiJ_G0016656	Synj1	100	82.158	Mus_pahari
ENSPREG00000012412	synj1	98	67.680	MGP_SPRETEiJ_G0021857	Synj1	100	82.302	Mus_spretus
ENSPREG00000012412	synj1	99	65.945	ENSMPUG00000001153	SYNJ1	70	75.656	Mustela_putorius_furo
ENSPREG00000012412	synj1	51	80.355	ENSMLUG00000026584	-	100	80.655	Myotis_lucifugus
ENSPREG00000012412	synj1	59	63.041	ENSMLUG00000005764	-	55	71.235	Myotis_lucifugus
ENSPREG00000012412	synj1	98	66.716	ENSNGAG00000000453	Synj1	100	82.158	Nannospalax_galili
ENSPREG00000012412	synj1	100	83.271	ENSNBRG00000011936	synj1	99	81.140	Neolamprologus_brichardi
ENSPREG00000012412	synj1	80	66.566	ENSNLEG00000003734	SYNJ1	98	63.183	Nomascus_leucogenys
ENSPREG00000012412	synj1	82	61.006	ENSMEUG00000004158	-	65	63.751	Notamacropus_eugenii
ENSPREG00000012412	synj1	84	77.737	ENSOPRG00000013602	SYNJ1	75	77.737	Ochotona_princeps
ENSPREG00000012412	synj1	53	80.939	ENSODEG00000002409	-	100	82.158	Octodon_degus
ENSPREG00000012412	synj1	99	84.098	ENSONIG00000004667	synj1	95	82.214	Oreochromis_niloticus
ENSPREG00000012412	synj1	93	65.581	ENSOANG00000006929	SYNJ1	69	74.766	Ornithorhynchus_anatinus
ENSPREG00000012412	synj1	97	66.793	ENSOCUG00000001420	SYNJ1	84	64.454	Oryctolagus_cuniculus
ENSPREG00000012412	synj1	100	88.864	ENSORLG00000004320	synj1	100	88.563	Oryzias_latipes
ENSPREG00000012412	synj1	99	85.208	ENSORLG00020011994	synj1	98	84.943	Oryzias_latipes_hni
ENSPREG00000012412	synj1	99	82.237	ENSORLG00015018077	synj1	96	82.454	Oryzias_latipes_hsok
ENSPREG00000012412	synj1	100	85.854	ENSOMEG00000014322	synj1	99	85.629	Oryzias_melastigma
ENSPREG00000012412	synj1	94	66.002	ENSOGAG00000006010	SYNJ1	68	72.868	Otolemur_garnettii
ENSPREG00000012412	synj1	96	67.217	ENSOARG00000013414	SYNJ1	67	75.916	Ovis_aries
ENSPREG00000012412	synj1	99	67.788	ENSPPAG00000026784	SYNJ1	100	67.336	Pan_paniscus
ENSPREG00000012412	synj1	98	68.924	ENSPPRG00000023469	SYNJ1	100	66.345	Panthera_pardus
ENSPREG00000012412	synj1	98	68.999	ENSPTIG00000007930	SYNJ1	100	66.419	Panthera_tigris_altaica
ENSPREG00000012412	synj1	99	67.788	ENSPTRG00000023787	SYNJ1	99	69.985	Pan_troglodytes
ENSPREG00000012412	synj1	94	71.090	ENSPTRG00000048135	-	99	69.985	Pan_troglodytes
ENSPREG00000012412	synj1	99	67.656	ENSPANG00000022531	SYNJ1	100	67.375	Papio_anubis
ENSPREG00000012412	synj1	86	82.251	ENSPKIG00000022603	synj1	95	82.027	Paramormyrops_kingsleyae
ENSPREG00000012412	synj1	95	89.799	ENSPMGG00000016831	synj1	97	88.935	Periophthalmus_magnuspinnatus
ENSPREG00000012412	synj1	100	67.152	ENSPEMG00000018767	Synj1	100	82.446	Peromyscus_maniculatus_bairdii
ENSPREG00000012412	synj1	99	51.422	ENSPMAG00000002887	synj1	85	56.300	Petromyzon_marinus
ENSPREG00000012412	synj1	95	68.360	ENSPCIG00000016372	SYNJ1	83	75.137	Phascolarctos_cinereus
ENSPREG00000012412	synj1	100	96.111	ENSPFOG00000016886	synj1	100	96.787	Poecilia_formosa
ENSPREG00000012412	synj1	100	96.326	ENSPLAG00000017559	synj1	100	96.326	Poecilia_latipinna
ENSPREG00000012412	synj1	100	96.265	ENSPMEG00000007643	synj1	100	96.265	Poecilia_mexicana
ENSPREG00000012412	synj1	89	71.174	ENSPPYG00000011365	SYNJ1	78	76.069	Pongo_abelii
ENSPREG00000012412	synj1	78	81.429	ENSPCAG00000009906	SYNJ1	58	81.429	Procavia_capensis
ENSPREG00000012412	synj1	88	76.179	ENSPCOG00000024841	SYNJ1	94	76.179	Propithecus_coquereli
ENSPREG00000012412	synj1	89	66.667	ENSPVAG00000000892	SYNJ1	83	63.449	Pteropus_vampyrus
ENSPREG00000012412	synj1	100	87.330	ENSPNYG00000022989	synj1	100	88.500	Pundamilia_nyererei
ENSPREG00000012412	synj1	83	88.556	ENSPNAG00000021119	synj1	91	88.556	Pygocentrus_nattereri
ENSPREG00000012412	synj1	96	70.031	ENSRNOG00000002051	Synj1	100	67.164	Rattus_norvegicus
ENSPREG00000012412	synj1	99	67.303	ENSRBIG00000034477	SYNJ1	100	67.302	Rhinopithecus_bieti
ENSPREG00000012412	synj1	99	67.377	ENSRROG00000039256	SYNJ1	100	67.088	Rhinopithecus_roxellana
ENSPREG00000012412	synj1	96	68.293	ENSSBOG00000021001	SYNJ1	99	67.973	Saimiri_boliviensis_boliviensis
ENSPREG00000012412	synj1	94	67.547	ENSSHAG00000008538	SYNJ1	70	75.434	Sarcophilus_harrisii
ENSPREG00000012412	synj1	100	81.947	ENSSFOG00015006095	synj1	86	81.898	Scleropages_formosus
ENSPREG00000012412	synj1	99	85.460	ENSSMAG00000018066	synj1	98	85.457	Scophthalmus_maximus
ENSPREG00000012412	synj1	100	84.704	ENSSDUG00000013058	synj1	99	85.009	Seriola_dumerili
ENSPREG00000012412	synj1	100	88.537	ENSSLDG00000021406	synj1	100	88.973	Seriola_lalandi_dorsalis
ENSPREG00000012412	synj1	95	70.087	ENSSPUG00000012552	SYNJ1	84	66.815	Sphenodon_punctatus
ENSPREG00000012412	synj1	100	87.575	ENSSPAG00000017029	synj1	99	87.259	Stegastes_partitus
ENSPREG00000012412	synj1	94	87.362	ENSSPAG00000006812	SYNJ1	99	83.916	Stegastes_partitus
ENSPREG00000012412	synj1	99	67.209	ENSSSCG00000012035	SYNJ1	100	66.495	Sus_scrofa
ENSPREG00000012412	synj1	97	68.550	ENSTGUG00000013445	SYNJ1	82	66.642	Taeniopygia_guttata
ENSPREG00000012412	synj1	100	83.170	ENSTRUG00000006907	synj1	97	84.434	Takifugu_rubripes
ENSPREG00000012412	synj1	100	78.223	ENSTNIG00000009940	synj1	99	79.197	Tetraodon_nigroviridis
ENSPREG00000012412	synj1	81	83.544	ENSTBEG00000016298	SYNJ1	61	83.544	Tupaia_belangeri
ENSPREG00000012412	synj1	99	62.146	ENSTTRG00000002222	SYNJ1	71	68.966	Tursiops_truncatus
ENSPREG00000012412	synj1	96	68.765	ENSUAMG00000018606	SYNJ1	99	78.980	Ursus_americanus
ENSPREG00000012412	synj1	94	76.000	ENSUMAG00000018419	SYNJ1	99	78.980	Ursus_maritimus
ENSPREG00000012412	synj1	79	81.429	ENSVPAG00000001241	SYNJ1	59	81.429	Vicugna_pacos
ENSPREG00000012412	synj1	96	67.671	ENSVVUG00000023125	SYNJ1	83	76.026	Vulpes_vulpes
ENSPREG00000012412	synj1	95	66.113	ENSXETG00000009899	synj1	85	64.668	Xenopus_tropicalis
ENSPREG00000012412	synj1	99	93.960	ENSXCOG00000011896	synj1	99	96.554	Xiphophorus_couchianus
ENSPREG00000012412	synj1	100	97.806	ENSXMAG00000017524	synj1	100	97.806	Xiphophorus_maculatus