EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000012484 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 3397 bases
Position: chrKK215436.1:13727-17123
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000018420	RVT_1	PF00078.27	3.9e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000018621	-	3363	-	ENSPREP00000018420	1121 (aa)	-	-

Gene Model

Click here to download ENSPREG00000012484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000012484's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000012484	-	94	48.792	ENSPREG00000005456	-	92	48.792
ENSPREG00000012484	-	93	49.053	ENSPREG00000005756	-	96	49.053

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000012484	-	93	39.159	ENSACIG00000007038	-	93	39.249	Amphilophus_citrinellus
ENSPREG00000012484	-	76	41.014	ENSACIG00000013116	-	85	41.014	Amphilophus_citrinellus
ENSPREG00000012484	-	93	35.721	ENSACIG00000012161	-	93	35.620	Amphilophus_citrinellus
ENSPREG00000012484	-	76	41.088	ENSACIG00000009025	-	97	40.719	Amphilophus_citrinellus
ENSPREG00000012484	-	83	39.571	ENSACIG00000010787	-	92	39.571	Amphilophus_citrinellus
ENSPREG00000012484	-	72	39.435	ENSAMXG00000042811	-	70	39.435	Astyanax_mexicanus
ENSPREG00000012484	-	82	37.633	ENSCPBG00000003842	-	70	37.396	Chrysemys_picta_bellii
ENSPREG00000012484	-	91	39.296	ENSCVAG00000004138	-	98	39.296	Cyprinodon_variegatus
ENSPREG00000012484	-	72	35.354	ENSELUG00000004618	-	75	31.959	Esox_lucius
ENSPREG00000012484	-	72	36.430	ENSELUG00000004597	-	84	36.386	Esox_lucius
ENSPREG00000012484	-	91	37.714	ENSFHEG00000002865	-	91	37.524	Fundulus_heteroclitus
ENSPREG00000012484	-	94	38.603	ENSFHEG00000022106	-	99	38.655	Fundulus_heteroclitus
ENSPREG00000012484	-	90	39.058	ENSFHEG00000002853	-	91	39.092	Fundulus_heteroclitus
ENSPREG00000012484	-	85	39.979	ENSFHEG00000007211	-	99	37.951	Fundulus_heteroclitus
ENSPREG00000012484	-	52	40.614	ENSGMOG00000005227	-	99	40.444	Gadus_morhua
ENSPREG00000012484	-	90	33.268	ENSHCOG00000007389	-	94	33.268	Hippocampus_comes
ENSPREG00000012484	-	82	37.500	ENSHCOG00000000471	-	76	37.607	Hippocampus_comes
ENSPREG00000012484	-	60	49.254	ENSHCOG00000007436	-	75	49.254	Hippocampus_comes
ENSPREG00000012484	-	90	33.553	ENSHCOG00000007397	-	93	33.616	Hippocampus_comes
ENSPREG00000012484	-	66	38.347	ENSLBEG00000006732	-	90	37.400	Labrus_bergylta
ENSPREG00000012484	-	66	39.195	ENSLBEG00000004576	-	90	39.195	Labrus_bergylta
ENSPREG00000012484	-	71	39.753	ENSLBEG00000003745	-	91	39.506	Labrus_bergylta
ENSPREG00000012484	-	52	33.162	ENSLACG00000009240	-	100	33.162	Latimeria_chalumnae
ENSPREG00000012484	-	68	33.291	ENSLACG00000006357	-	97	33.291	Latimeria_chalumnae
ENSPREG00000012484	-	89	31.336	ENSLOCG00000011928	-	99	31.336	Lepisosteus_oculatus
ENSPREG00000012484	-	89	32.358	ENSLOCG00000017064	-	97	32.358	Lepisosteus_oculatus
ENSPREG00000012484	-	90	39.546	ENSMAMG00000019985	-	90	39.449	Mastacembelus_armatus
ENSPREG00000012484	-	93	39.758	ENSONIG00000020875	-	92	39.758	Oreochromis_niloticus
ENSPREG00000012484	-	90	35.322	ENSOMEG00000015368	-	99	35.511	Oryzias_melastigma
ENSPREG00000012484	-	76	41.531	ENSPMGG00000001593	-	89	41.531	Periophthalmus_magnuspinnatus
ENSPREG00000012484	-	83	38.591	ENSPMGG00000017392	-	99	38.591	Periophthalmus_magnuspinnatus
ENSPREG00000012484	-	91	68.756	ENSPLAG00000011810	-	96	68.756	Poecilia_latipinna
ENSPREG00000012484	-	92	68.732	ENSPLAG00000022994	-	98	68.732	Poecilia_latipinna
ENSPREG00000012484	-	74	72.859	ENSPLAG00000023379	-	99	72.859	Poecilia_latipinna
ENSPREG00000012484	-	89	66.500	ENSPLAG00000011817	-	99	66.500	Poecilia_latipinna
ENSPREG00000012484	-	94	67.204	ENSPMEG00000008574	-	99	67.204	Poecilia_mexicana
ENSPREG00000012484	-	93	66.635	ENSPMEG00000003431	-	99	66.826	Poecilia_mexicana
ENSPREG00000012484	-	90	34.787	ENSPNAG00000016635	-	90	34.787	Pygocentrus_nattereri
ENSPREG00000012484	-	80	40.220	ENSPNAG00000007038	-	79	39.762	Pygocentrus_nattereri
ENSPREG00000012484	-	77	35.197	ENSPNAG00000017596	-	91	35.197	Pygocentrus_nattereri
ENSPREG00000012484	-	87	35.932	ENSPNAG00000014625	-	90	36.286	Pygocentrus_nattereri
ENSPREG00000012484	-	80	37.664	ENSPNAG00000021754	-	78	37.589	Pygocentrus_nattereri
ENSPREG00000012484	-	81	39.588	ENSPNAG00000003539	-	76	39.588	Pygocentrus_nattereri
ENSPREG00000012484	-	81	39.851	ENSXCOG00000013093	-	79	39.851	Xiphophorus_couchianus
ENSPREG00000012484	-	74	70.929	ENSXCOG00000008881	-	94	70.929	Xiphophorus_couchianus
ENSPREG00000012484	-	91	64.447	ENSXMAG00000028672	-	92	64.447	Xiphophorus_maculatus