EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000012496 (Gene tree)
Gene ID: 103463535
Gene Symbol: safb
Alias: -
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 14655 bases
Position: chrLG4:26031266-26045920
Accession: 103463535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000018447	RRM_1	PF00076.22	7.8e-12	1	1
ENSPREP00000018447	SAP	PF02037.27	3.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000018648	-	5800	XM_008406925	ENSPREP00000018447	767 (aa)	XP_008405147	UPI0004A4562C

Gene Model

Click here to download ENSPREG00000012496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000012496's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000012496	safb	95	41.176	ENSG00000160633	SAFB	76	62.500	Homo_sapiens
ENSPREG00000012496	safb	100	67.450	ENSAPOG00000022508	safb	100	66.863	Acanthochromis_polyacanthus
ENSPREG00000012496	safb	100	66.049	ENSACIG00000006247	safb	100	66.707	Amphilophus_citrinellus
ENSPREG00000012496	safb	100	65.018	ENSAOCG00000006308	safb	100	65.968	Amphiprion_ocellaris
ENSPREG00000012496	safb	100	67.488	ENSAPEG00000023342	safb	100	67.020	Amphiprion_percula
ENSPREG00000012496	safb	100	66.121	ENSATEG00000004998	safb	100	65.457	Anabas_testudineus
ENSPREG00000012496	safb	93	38.031	ENSAPLG00000005780	-	97	42.308	Anas_platyrhynchos
ENSPREG00000012496	safb	62	56.840	ENSACAG00000016893	-	68	53.275	Anolis_carolinensis
ENSPREG00000012496	safb	95	41.266	ENSANAG00000028821	SAFB	94	38.983	Aotus_nancymaae
ENSPREG00000012496	safb	100	68.957	ENSACLG00000001926	safb	100	69.202	Astatotilapia_calliptera
ENSPREG00000012496	safb	97	54.706	ENSAMXG00000018154	safb	99	55.906	Astyanax_mexicanus
ENSPREG00000012496	safb	52	53.462	ENSCJAG00000017081	SAFB	93	45.312	Callithrix_jacchus
ENSPREG00000012496	safb	98	40.642	ENSCHIG00000007262	SAFB	95	38.462	Capra_hircus
ENSPREG00000012496	safb	54	43.114	ENSTSYG00000001851	-	88	40.619	Carlito_syrichta
ENSPREG00000012496	safb	51	52.174	ENSCPOG00000026322	SAFB	71	45.735	Cavia_porcellus
ENSPREG00000012496	safb	95	41.149	ENSCCAG00000020193	SAFB	93	39.541	Cebus_capucinus
ENSPREG00000012496	safb	95	41.114	ENSCATG00000029994	SAFB	93	39.541	Cercocebus_atys
ENSPREG00000012496	safb	56	49.141	ENSCLAG00000007734	SAFB	76	47.150	Chinchilla_lanigera
ENSPREG00000012496	safb	90	41.706	ENSCPBG00000010928	-	92	42.731	Chrysemys_picta_bellii
ENSPREG00000012496	safb	90	41.110	ENSCPBG00000010936	-	69	50.971	Chrysemys_picta_bellii
ENSPREG00000012496	safb	94	40.452	ENSCANG00000019754	-	93	37.853	Colobus_angolensis_palliatus
ENSPREG00000012496	safb	98	38.693	ENSCANG00000004774	-	89	40.351	Colobus_angolensis_palliatus
ENSPREG00000012496	safb	65	44.526	ENSCGRG00001002254	Safb	91	42.857	Cricetulus_griseus_chok1gshd
ENSPREG00000012496	safb	99	63.763	ENSCSEG00000019870	safb	100	63.291	Cynoglossus_semilaevis
ENSPREG00000012496	safb	100	82.490	ENSCVAG00000002226	safb	100	82.490	Cyprinodon_variegatus
ENSPREG00000012496	safb	97	55.374	ENSDARG00000020467	safb	99	53.182	Danio_rerio
ENSPREG00000012496	safb	66	38.547	ENSDNOG00000015746	SAFB	82	38.242	Dasypus_novemcinctus
ENSPREG00000012496	safb	51	54.724	ENSDORG00000016200	Safb	71	42.379	Dipodomys_ordii
ENSPREG00000012496	safb	65	40.367	ENSEASG00005023019	SAFB	97	37.307	Equus_asinus_asinus
ENSPREG00000012496	safb	99	56.946	ENSELUG00000022327	safb	99	56.164	Esox_lucius
ENSPREG00000012496	safb	67	39.315	ENSFCAG00000011835	SAFB	72	45.098	Felis_catus
ENSPREG00000012496	safb	65	40.970	ENSFALG00000013882	-	87	43.449	Ficedula_albicollis
ENSPREG00000012496	safb	100	85.825	ENSFHEG00000004219	safb	100	85.825	Fundulus_heteroclitus
ENSPREG00000012496	safb	100	57.783	ENSGMOG00000014280	safb	100	58.548	Gadus_morhua
ENSPREG00000012496	safb	67	40.800	ENSGALG00000013365	-	96	43.459	Gallus_gallus
ENSPREG00000012496	safb	57	50.464	ENSGALG00000001948	-	83	49.462	Gallus_gallus
ENSPREG00000012496	safb	100	94.110	ENSGAFG00000016162	safb	100	93.982	Gambusia_affinis
ENSPREG00000012496	safb	100	62.286	ENSGACG00000011385	safb	100	62.514	Gasterosteus_aculeatus
ENSPREG00000012496	safb	69	49.508	ENSGAGG00000017702	-	87	51.049	Gopherus_agassizii
ENSPREG00000012496	safb	95	45.847	ENSGAGG00000008424	-	65	52.429	Gopherus_agassizii
ENSPREG00000012496	safb	95	41.294	ENSGGOG00000015109	SAFB	93	39.376	Gorilla_gorilla
ENSPREG00000012496	safb	100	65.062	ENSHBUG00000009218	safb	100	64.444	Haplochromis_burtoni
ENSPREG00000012496	safb	52	47.766	ENSHGLG00000015883	SAFB	73	42.882	Heterocephalus_glaber_female
ENSPREG00000012496	safb	79	47.445	ENSHGLG00100004228	SAFB	67	41.781	Heterocephalus_glaber_male
ENSPREG00000012496	safb	93	59.103	ENSHCOG00000001705	safb	99	59.692	Hippocampus_comes
ENSPREG00000012496	safb	99	56.353	ENSIPUG00000024869	safb2	100	56.805	Ictalurus_punctatus
ENSPREG00000012496	safb	100	71.807	ENSKMAG00000022308	safb	100	71.377	Kryptolebias_marmoratus
ENSPREG00000012496	safb	100	65.509	ENSLBEG00000006015	safb	100	65.394	Labrus_bergylta
ENSPREG00000012496	safb	65	41.379	ENSLACG00000018090	SAFB	97	45.363	Latimeria_chalumnae
ENSPREG00000012496	safb	98	54.128	ENSLOCG00000003613	safb	99	55.659	Lepisosteus_oculatus
ENSPREG00000012496	safb	95	40.265	ENSLAFG00000003840	SAFB	75	43.502	Loxodonta_africana
ENSPREG00000012496	safb	95	41.114	ENSMFAG00000003885	SAFB	93	39.541	Macaca_fascicularis
ENSPREG00000012496	safb	95	41.190	ENSMMUG00000017970	SAFB	94	39.274	Macaca_mulatta
ENSPREG00000012496	safb	95	40.215	ENSMNEG00000035637	SAFB	93	38.936	Macaca_nemestrina
ENSPREG00000012496	safb	61	38.593	ENSMLEG00000038637	SAFB	94	36.789	Mandrillus_leucophaeus
ENSPREG00000012496	safb	100	65.771	ENSMAMG00000003357	safb	91	64.561	Mastacembelus_armatus
ENSPREG00000012496	safb	100	69.080	ENSMZEG00005009120	safb	100	69.325	Maylandia_zebra
ENSPREG00000012496	safb	97	38.216	ENSMGAG00000001101	-	67	48.936	Meleagris_gallopavo
ENSPREG00000012496	safb	57	50.774	ENSMGAG00000001051	-	82	51.866	Meleagris_gallopavo
ENSPREG00000012496	safb	66	40.820	ENSMICG00000008739	-	93	40.479	Microcebus_murinus
ENSPREG00000012496	safb	50	45.476	ENSMICG00000046795	-	70	60.870	Microcebus_murinus
ENSPREG00000012496	safb	94	41.077	ENSMODG00000001236	SAFB	76	42.997	Monodelphis_domestica
ENSPREG00000012496	safb	100	65.820	ENSMALG00000020330	safb	100	65.087	Monopterus_albus
ENSPREG00000012496	safb	93	41.260	ENSNLEG00000013551	SAFB	97	39.320	Nomascus_leucogenys
ENSPREG00000012496	safb	50	53.279	ENSODEG00000014838	SAFB	71	44.737	Octodon_degus
ENSPREG00000012496	safb	100	66.472	ENSONIG00000002318	safb	100	66.472	Oreochromis_niloticus
ENSPREG00000012496	safb	58	42.936	ENSOCUG00000014628	SAFB	63	42.193	Oryctolagus_cuniculus
ENSPREG00000012496	safb	98	66.502	ENSORLG00000016989	safb	100	65.542	Oryzias_latipes
ENSPREG00000012496	safb	98	63.038	ENSORLG00020000404	safb	100	62.794	Oryzias_latipes_hni
ENSPREG00000012496	safb	98	66.379	ENSORLG00015010733	safb	100	65.745	Oryzias_latipes_hsok
ENSPREG00000012496	safb	100	67.108	ENSOMEG00000009066	safb	100	66.466	Oryzias_melastigma
ENSPREG00000012496	safb	65	39.255	ENSOGAG00000027769	SAFB	92	39.229	Otolemur_garnettii
ENSPREG00000012496	safb	95	41.294	ENSPPAG00000035129	SAFB	93	39.256	Pan_paniscus
ENSPREG00000012496	safb	67	39.315	ENSPPRG00000017197	SAFB	72	45.098	Panthera_pardus
ENSPREG00000012496	safb	95	41.294	ENSPTRG00000010335	SAFB	93	39.256	Pan_troglodytes
ENSPREG00000012496	safb	95	41.274	ENSPANG00000007770	SAFB	93	39.541	Papio_anubis
ENSPREG00000012496	safb	99	54.556	ENSPKIG00000009902	safb	99	54.730	Paramormyrops_kingsleyae
ENSPREG00000012496	safb	98	42.887	ENSPSIG00000009367	-	94	43.077	Pelodiscus_sinensis
ENSPREG00000012496	safb	98	42.737	ENSPSIG00000011679	-	96	43.488	Pelodiscus_sinensis
ENSPREG00000012496	safb	100	96.349	ENSPFOG00000007745	safb	100	96.349	Poecilia_formosa
ENSPREG00000012496	safb	100	95.057	ENSPLAG00000001614	safb	100	95.057	Poecilia_latipinna
ENSPREG00000012496	safb	100	96.219	ENSPMEG00000021023	safb	100	96.219	Poecilia_mexicana
ENSPREG00000012496	safb	65	35.761	ENSPCAG00000006475	SAFB	65	41.522	Procavia_capensis
ENSPREG00000012496	safb	95	37.984	ENSPCOG00000014090	SAFB	93	37.426	Propithecus_coquereli
ENSPREG00000012496	safb	74	46.875	ENSPVAG00000004913	SAFB	69	42.520	Pteropus_vampyrus
ENSPREG00000012496	safb	99	54.802	ENSPNAG00000021838	safb	99	57.579	Pygocentrus_nattereri
ENSPREG00000012496	safb	95	40.473	ENSRBIG00000042509	SAFB	61	61.194	Rhinopithecus_bieti
ENSPREG00000012496	safb	95	40.995	ENSRROG00000029278	SAFB	93	39.420	Rhinopithecus_roxellana
ENSPREG00000012496	safb	95	41.149	ENSSBOG00000026291	SAFB	93	39.541	Saimiri_boliviensis_boliviensis
ENSPREG00000012496	safb	99	55.756	ENSSFOG00015008156	safb	99	56.122	Scleropages_formosus
ENSPREG00000012496	safb	100	65.734	ENSSMAG00000009316	safb	100	66.161	Scophthalmus_maximus
ENSPREG00000012496	safb	100	67.078	ENSSDUG00000009652	safb	100	68.311	Seriola_dumerili
ENSPREG00000012496	safb	100	66.824	ENSSLDG00000001670	safb	100	65.885	Seriola_lalandi_dorsalis
ENSPREG00000012496	safb	54	40.241	ENSSPUG00000009747	-	89	37.738	Sphenodon_punctatus
ENSPREG00000012496	safb	98	65.428	ENSSPAG00000015682	safb	99	65.342	Stegastes_partitus
ENSPREG00000012496	safb	65	38.206	ENSSSCG00000013522	SAFB	88	37.680	Sus_scrofa
ENSPREG00000012496	safb	100	67.182	ENSTRUG00000003567	safb	100	65.636	Takifugu_rubripes
ENSPREG00000012496	safb	90	57.196	ENSTNIG00000015470	safb	100	56.821	Tetraodon_nigroviridis
ENSPREG00000012496	safb	66	72.222	ENSTTRG00000013588	SAFB	62	72.222	Tursiops_truncatus
ENSPREG00000012496	safb	60	54.032	ENSUMAG00000009734	SAFB	55	62.121	Ursus_maritimus
ENSPREG00000012496	safb	65	40.847	ENSXETG00000008755	safb	55	64.000	Xenopus_tropicalis
ENSPREG00000012496	safb	100	94.654	ENSXMAG00000003458	safb	100	94.654	Xiphophorus_maculatus