EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000012615 (Gene tree)
Gene ID: 103457046
Gene Symbol: crnkl1
Alias: zgc:55327
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 86613 bases
Position: chrLG21:527100-613712
Accession: 103457046
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000018668	Suf	PF05843.14	2.8e-11	1	1
ENSPREP00000018656	Suf	PF05843.14	3.9e-11	1	1
ENSPREP00000018684	Suf	PF05843.14	2e-10	1	1
ENSPREP00000018668	HAT	PF02184.16	3.4e-36	1	2
ENSPREP00000018668	HAT	PF02184.16	3.4e-36	2	2
ENSPREP00000018618	HAT	PF02184.16	7.4e-36	1	2
ENSPREP00000018618	HAT	PF02184.16	7.4e-36	2	2
ENSPREP00000018656	HAT	PF02184.16	8.7e-36	1	2
ENSPREP00000018656	HAT	PF02184.16	8.7e-36	2	2
ENSPREP00000018631	HAT	PF02184.16	9e-36	1	2
ENSPREP00000018631	HAT	PF02184.16	9e-36	2	2
ENSPREP00000018684	HAT	PF02184.16	6.9e-32	1	2
ENSPREP00000018684	HAT	PF02184.16	6.9e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000018888	-	5969	-	ENSPREP00000018684	665 (aa)	-	-
ENSPRET00000018820	-	6538	XM_008396950	ENSPREP00000018618	745 (aa)	XP_008395172	UPI0004A2B88B
ENSPRET00000018871	-	6068	-	ENSPREP00000018668	698 (aa)	-	-
ENSPRET00000018833	-	2796	-	ENSPREP00000018631	749 (aa)	-	-
ENSPRET00000018859	-	6128	XM_017302294	ENSPREP00000018656	718 (aa)	XP_017157783	UPI0007EAB998

Gene Model

Click here to download ENSPREG00000012615's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000012615's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000012615	crnkl1	92	84.211	ENSG00000101343	CRNKL1	97	85.886	Homo_sapiens
ENSPREG00000012615	crnkl1	96	91.292	ENSAPOG00000009705	crnkl1	98	95.035	Acanthochromis_polyacanthus
ENSPREG00000012615	crnkl1	91	84.831	ENSAMEG00000000270	CRNKL1	80	86.787	Ailuropoda_melanoleuca
ENSPREG00000012615	crnkl1	97	86.813	ENSACIG00000015267	crnkl1	89	92.354	Amphilophus_citrinellus
ENSPREG00000012615	crnkl1	96	91.152	ENSAOCG00000021964	crnkl1	96	95.213	Amphiprion_ocellaris
ENSPREG00000012615	crnkl1	96	91.292	ENSAPEG00000015041	crnkl1	89	94.903	Amphiprion_percula
ENSPREG00000012615	crnkl1	96	87.744	ENSATEG00000001068	crnkl1	88	92.377	Anabas_testudineus
ENSPREG00000012615	crnkl1	90	84.054	ENSAPLG00000013105	CRNKL1	97	84.258	Anas_platyrhynchos
ENSPREG00000012615	crnkl1	92	85.044	ENSACAG00000005284	CRNKL1	97	86.657	Anolis_carolinensis
ENSPREG00000012615	crnkl1	85	86.032	ENSANAG00000024889	CRNKL1	99	86.032	Aotus_nancymaae
ENSPREG00000012615	crnkl1	96	88.340	ENSACLG00000010813	crnkl1	94	94.504	Astatotilapia_calliptera
ENSPREG00000012615	crnkl1	89	91.429	ENSAMXG00000018334	crnkl1	90	91.304	Astyanax_mexicanus
ENSPREG00000012615	crnkl1	92	84.615	ENSBTAG00000008472	CRNKL1	96	86.787	Bos_taurus
ENSPREG00000012615	crnkl1	92	57.659	WBGene00019762	M03F8.3	86	66.547	Caenorhabditis_elegans
ENSPREG00000012615	crnkl1	92	84.357	ENSCJAG00000005393	CRNKL1	97	86.036	Callithrix_jacchus
ENSPREG00000012615	crnkl1	91	85.081	ENSCAFG00000005333	CRNKL1	91	86.787	Canis_familiaris
ENSPREG00000012615	crnkl1	92	85.191	ENSCAFG00020027488	CRNKL1	97	86.787	Canis_lupus_dingo
ENSPREG00000012615	crnkl1	92	83.745	ENSCHIG00000013171	CRNKL1	96	85.886	Capra_hircus
ENSPREG00000012615	crnkl1	92	84.211	ENSTSYG00000004197	CRNKL1	97	85.886	Carlito_syrichta
ENSPREG00000012615	crnkl1	86	82.553	ENSCAPG00000010501	CRNKL1	96	84.641	Cavia_aperea
ENSPREG00000012615	crnkl1	92	83.918	ENSCPOG00000004418	CRNKL1	97	85.736	Cavia_porcellus
ENSPREG00000012615	crnkl1	92	84.211	ENSCCAG00000027037	CRNKL1	97	85.886	Cebus_capucinus
ENSPREG00000012615	crnkl1	92	84.064	ENSCATG00000034247	CRNKL1	97	85.736	Cercocebus_atys
ENSPREG00000012615	crnkl1	92	84.211	ENSCLAG00000013859	CRNKL1	97	86.036	Chinchilla_lanigera
ENSPREG00000012615	crnkl1	92	84.064	ENSCSAG00000011434	CRNKL1	97	85.736	Chlorocebus_sabaeus
ENSPREG00000012615	crnkl1	91	84.094	ENSCHOG00000006371	CRNKL1	81	86.036	Choloepus_hoffmanni
ENSPREG00000012615	crnkl1	90	86.647	ENSCPBG00000023501	CRNKL1	97	87.106	Chrysemys_picta_bellii
ENSPREG00000012615	crnkl1	89	68.524	ENSCING00000002709	-	97	68.524	Ciona_intestinalis
ENSPREG00000012615	crnkl1	92	84.064	ENSCANG00000038789	CRNKL1	97	85.736	Colobus_angolensis_palliatus
ENSPREG00000012615	crnkl1	92	83.988	ENSCGRG00001001115	-	97	86.036	Cricetulus_griseus_chok1gshd
ENSPREG00000012615	crnkl1	92	83.988	ENSCGRG00001000687	-	97	86.036	Cricetulus_griseus_chok1gshd
ENSPREG00000012615	crnkl1	92	83.988	ENSCGRG00000007854	Crnkl1	97	86.036	Cricetulus_griseus_crigri
ENSPREG00000012615	crnkl1	100	84.921	ENSCSEG00000005594	crnkl1	98	93.413	Cynoglossus_semilaevis
ENSPREG00000012615	crnkl1	90	96.407	ENSCVAG00000015172	crnkl1	100	90.508	Cyprinodon_variegatus
ENSPREG00000012615	crnkl1	96	87.047	ENSDARG00000007901	crnkl1	89	90.855	Danio_rerio
ENSPREG00000012615	crnkl1	92	84.773	ENSDNOG00000016226	CRNKL1	92	86.486	Dasypus_novemcinctus
ENSPREG00000012615	crnkl1	89	78.561	ENSDORG00000030174	-	99	80.817	Dipodomys_ordii
ENSPREG00000012615	crnkl1	89	79.248	ENSDORG00000023724	-	98	79.248	Dipodomys_ordii
ENSPREG00000012615	crnkl1	92	82.899	ENSDORG00000000394	-	97	84.673	Dipodomys_ordii
ENSPREG00000012615	crnkl1	88	69.532	FBgn0000377	crn	94	69.532	Drosophila_melanogaster
ENSPREG00000012615	crnkl1	91	82.383	ENSETEG00000003711	CRNKL1	81	82.383	Echinops_telfairi
ENSPREG00000012615	crnkl1	90	62.680	ENSEBUG00000013461	crnkl1	94	57.186	Eptatretus_burgeri
ENSPREG00000012615	crnkl1	92	85.191	ENSEASG00005002072	CRNKL1	97	86.787	Equus_asinus_asinus
ENSPREG00000012615	crnkl1	92	85.191	ENSECAG00000022215	CRNKL1	97	86.787	Equus_caballus
ENSPREG00000012615	crnkl1	91	81.885	ENSEEUG00000000413	CRNKL1	90	83.784	Erinaceus_europaeus
ENSPREG00000012615	crnkl1	90	89.505	ENSELUG00000015424	crnkl1	94	89.505	Esox_lucius
ENSPREG00000012615	crnkl1	92	84.942	ENSFCAG00000000714	CRNKL1	97	86.787	Felis_catus
ENSPREG00000012615	crnkl1	88	85.693	ENSFALG00000004611	CRNKL1	97	86.064	Ficedula_albicollis
ENSPREG00000012615	crnkl1	92	84.627	ENSFDAG00000000604	CRNKL1	97	86.336	Fukomys_damarensis
ENSPREG00000012615	crnkl1	100	87.143	ENSFHEG00000013163	crnkl1	96	90.175	Fundulus_heteroclitus
ENSPREG00000012615	crnkl1	90	90.269	ENSGMOG00000007609	crnkl1	92	90.269	Gadus_morhua
ENSPREG00000012615	crnkl1	92	84.964	ENSGALG00000008429	CRNKL1	97	86.657	Gallus_gallus
ENSPREG00000012615	crnkl1	100	95.867	ENSGAFG00000014249	crnkl1	97	95.867	Gambusia_affinis
ENSPREG00000012615	crnkl1	96	87.414	ENSGACG00000011852	crnkl1	89	91.916	Gasterosteus_aculeatus
ENSPREG00000012615	crnkl1	86	85.093	ENSGAGG00000021233	CRNKL1	97	85.557	Gopherus_agassizii
ENSPREG00000012615	crnkl1	92	84.211	ENSGGOG00000014176	CRNKL1	97	85.886	Gorilla_gorilla
ENSPREG00000012615	crnkl1	100	86.013	ENSHBUG00000005246	crnkl1	94	94.681	Haplochromis_burtoni
ENSPREG00000012615	crnkl1	91	85.481	ENSHGLG00000010856	CRNKL1	97	86.336	Heterocephalus_glaber_female
ENSPREG00000012615	crnkl1	91	85.481	ENSHGLG00100011521	CRNKL1	97	86.336	Heterocephalus_glaber_male
ENSPREG00000012615	crnkl1	90	89.655	ENSHCOG00000006420	crnkl1	100	90.747	Hippocampus_comes
ENSPREG00000012615	crnkl1	85	70.126	ENSIPUG00000000315	-	99	71.339	Ictalurus_punctatus
ENSPREG00000012615	crnkl1	91	75.369	ENSIPUG00000006836	-	97	76.241	Ictalurus_punctatus
ENSPREG00000012615	crnkl1	87	88.906	ENSIPUG00000006751	crnkl1	90	88.786	Ictalurus_punctatus
ENSPREG00000012615	crnkl1	92	84.649	ENSSTOG00000014747	CRNKL1	97	86.486	Ictidomys_tridecemlineatus
ENSPREG00000012615	crnkl1	92	82.429	ENSJJAG00000016926	Crnkl1	97	84.164	Jaculus_jaculus
ENSPREG00000012615	crnkl1	97	89.627	ENSKMAG00000003620	crnkl1	98	94.469	Kryptolebias_marmoratus
ENSPREG00000012615	crnkl1	89	85.323	ENSLBEG00000003543	crnkl1	89	85.323	Labrus_bergylta
ENSPREG00000012615	crnkl1	92	86.237	ENSLACG00000001129	CRNKL1	98	87.406	Latimeria_chalumnae
ENSPREG00000012615	crnkl1	89	90.376	ENSLOCG00000016889	crnkl1	93	90.255	Lepisosteus_oculatus
ENSPREG00000012615	crnkl1	92	83.942	ENSLAFG00000004512	CRNKL1	97	86.507	Loxodonta_africana
ENSPREG00000012615	crnkl1	92	84.064	ENSMFAG00000039893	CRNKL1	97	85.736	Macaca_fascicularis
ENSPREG00000012615	crnkl1	92	84.064	ENSMMUG00000007709	CRNKL1	97	85.736	Macaca_mulatta
ENSPREG00000012615	crnkl1	92	84.064	ENSMNEG00000037490	CRNKL1	97	85.736	Macaca_nemestrina
ENSPREG00000012615	crnkl1	92	84.064	ENSMLEG00000034885	CRNKL1	97	85.736	Mandrillus_leucophaeus
ENSPREG00000012615	crnkl1	94	90.612	ENSMAMG00000008757	crnkl1	92	94.504	Mastacembelus_armatus
ENSPREG00000012615	crnkl1	100	86.991	ENSMZEG00005022345	crnkl1	95	94.504	Maylandia_zebra
ENSPREG00000012615	crnkl1	92	84.548	ENSMGAG00000003452	CRNKL1	92	86.228	Meleagris_gallopavo
ENSPREG00000012615	crnkl1	92	83.988	ENSMAUG00000020764	Crnkl1	97	86.036	Mesocricetus_auratus
ENSPREG00000012615	crnkl1	92	84.064	ENSMICG00000006048	CRNKL1	97	85.886	Microcebus_murinus
ENSPREG00000012615	crnkl1	89	61.747	ENSMOCG00000004179	-	95	62.615	Microtus_ochrogaster
ENSPREG00000012615	crnkl1	92	76.252	ENSMOCG00000000681	-	96	78.024	Microtus_ochrogaster
ENSPREG00000012615	crnkl1	85	90.823	ENSMMOG00000017601	crnkl1	97	90.823	Mola_mola
ENSPREG00000012615	crnkl1	92	81.818	ENSMODG00000005961	-	96	83.704	Monodelphis_domestica
ENSPREG00000012615	crnkl1	92	78.947	ENSMODG00000010857	-	97	80.480	Monodelphis_domestica
ENSPREG00000012615	crnkl1	94	64.970	ENSMALG00000011211	crnkl1	88	73.731	Monopterus_albus
ENSPREG00000012615	crnkl1	92	84.425	MGP_CAROLIEiJ_G0024394	Crnkl1	97	86.336	Mus_caroli
ENSPREG00000012615	crnkl1	92	84.279	ENSMUSG00000001767	Crnkl1	97	86.336	Mus_musculus
ENSPREG00000012615	crnkl1	92	83.406	MGP_PahariEiJ_G0025838	Crnkl1	97	85.435	Mus_pahari
ENSPREG00000012615	crnkl1	92	84.279	MGP_SPRETEiJ_G0025312	Crnkl1	97	86.336	Mus_spretus
ENSPREG00000012615	crnkl1	92	84.942	ENSMPUG00000001226	CRNKL1	97	86.787	Mustela_putorius_furo
ENSPREG00000012615	crnkl1	91	84.412	ENSMLUG00000016513	CRNKL1	86	86.357	Myotis_lucifugus
ENSPREG00000012615	crnkl1	92	82.209	ENSNGAG00000023097	Crnkl1	97	83.947	Nannospalax_galili
ENSPREG00000012615	crnkl1	96	88.477	ENSNBRG00000007867	crnkl1	94	94.681	Neolamprologus_brichardi
ENSPREG00000012615	crnkl1	92	81.287	ENSNLEG00000009862	CRNKL1	97	82.883	Nomascus_leucogenys
ENSPREG00000012615	crnkl1	92	80.088	ENSMEUG00000002361	-	97	81.259	Notamacropus_eugenii
ENSPREG00000012615	crnkl1	90	84.454	ENSMEUG00000012167	-	97	86.482	Notamacropus_eugenii
ENSPREG00000012615	crnkl1	79	59.109	ENSOPRG00000009242	-	61	59.109	Ochotona_princeps
ENSPREG00000012615	crnkl1	92	84.064	ENSODEG00000012175	CRNKL1	97	85.886	Octodon_degus
ENSPREG00000012615	crnkl1	97	88.324	ENSONIG00000018728	crnkl1	95	94.858	Oreochromis_niloticus
ENSPREG00000012615	crnkl1	91	83.824	ENSOCUG00000015484	CRNKL1	80	86.228	Oryctolagus_cuniculus
ENSPREG00000012615	crnkl1	96	87.083	ENSORLG00000017240	crnkl1	94	87.240	Oryzias_latipes
ENSPREG00000012615	crnkl1	96	87.083	ENSORLG00020001742	crnkl1	89	91.604	Oryzias_latipes_hni
ENSPREG00000012615	crnkl1	96	87.500	ENSORLG00015019564	crnkl1	89	91.754	Oryzias_latipes_hsok
ENSPREG00000012615	crnkl1	96	87.778	ENSOMEG00000019895	crnkl1	89	92.354	Oryzias_melastigma
ENSPREG00000012615	crnkl1	92	84.211	ENSOGAG00000011544	CRNKL1	97	86.036	Otolemur_garnettii
ENSPREG00000012615	crnkl1	92	84.649	ENSOARG00000002150	CRNKL1	87	86.937	Ovis_aries
ENSPREG00000012615	crnkl1	91	83.063	ENSPPAG00000027847	CRNKL1	81	84.835	Pan_paniscus
ENSPREG00000012615	crnkl1	92	84.942	ENSPPRG00000001955	CRNKL1	97	86.787	Panthera_pardus
ENSPREG00000012615	crnkl1	92	84.942	ENSPTIG00000007393	CRNKL1	97	86.787	Panthera_tigris_altaica
ENSPREG00000012615	crnkl1	92	84.211	ENSPTRG00000030609	CRNKL1	97	85.886	Pan_troglodytes
ENSPREG00000012615	crnkl1	92	84.064	ENSPANG00000017420	CRNKL1	97	85.736	Papio_anubis
ENSPREG00000012615	crnkl1	89	85.886	ENSPKIG00000017093	crnkl1	87	85.672	Paramormyrops_kingsleyae
ENSPREG00000012615	crnkl1	90	84.948	ENSPSIG00000012705	CRNKL1	97	85.392	Pelodiscus_sinensis
ENSPREG00000012615	crnkl1	91	85.628	ENSPMGG00000006263	crnkl1	96	89.146	Periophthalmus_magnuspinnatus
ENSPREG00000012615	crnkl1	92	84.279	ENSPEMG00000000073	-	96	86.336	Peromyscus_maniculatus_bairdii
ENSPREG00000012615	crnkl1	90	82.963	ENSPMAG00000002250	crnkl1	97	83.533	Petromyzon_marinus
ENSPREG00000012615	crnkl1	92	83.918	ENSPCIG00000025825	CRNKL1	97	82.229	Phascolarctos_cinereus
ENSPREG00000012615	crnkl1	100	97.718	ENSPFOG00000005102	crnkl1	100	97.718	Poecilia_formosa
ENSPREG00000012615	crnkl1	99	97.568	ENSPLAG00000007288	crnkl1	96	97.568	Poecilia_latipinna
ENSPREG00000012615	crnkl1	100	97.838	ENSPMEG00000008865	crnkl1	99	97.838	Poecilia_mexicana
ENSPREG00000012615	crnkl1	91	83.947	ENSPPYG00000010747	CRNKL1	79	85.736	Pongo_abelii
ENSPREG00000012615	crnkl1	91	79.676	ENSPCAG00000003296	CRNKL1	83	81.532	Procavia_capensis
ENSPREG00000012615	crnkl1	91	82.916	ENSPCOG00000017608	CRNKL1	81	84.835	Propithecus_coquereli
ENSPREG00000012615	crnkl1	91	84.683	ENSPVAG00000006207	CRNKL1	81	86.637	Pteropus_vampyrus
ENSPREG00000012615	crnkl1	96	88.203	ENSPNYG00000001977	crnkl1	94	94.326	Pundamilia_nyererei
ENSPREG00000012615	crnkl1	95	87.819	ENSPNAG00000001507	crnkl1	92	91.637	Pygocentrus_nattereri
ENSPREG00000012615	crnkl1	92	84.134	ENSRNOG00000040045	Crnkl1	97	86.186	Rattus_norvegicus
ENSPREG00000012615	crnkl1	92	84.279	ENSRNOG00000010587	Crnkl1	97	86.336	Rattus_norvegicus
ENSPREG00000012615	crnkl1	92	84.064	ENSRBIG00000031770	CRNKL1	97	85.736	Rhinopithecus_bieti
ENSPREG00000012615	crnkl1	92	84.064	ENSRROG00000040450	CRNKL1	97	85.736	Rhinopithecus_roxellana
ENSPREG00000012615	crnkl1	87	36.614	YLR117C	CLF1	99	36.614	Saccharomyces_cerevisiae
ENSPREG00000012615	crnkl1	92	84.357	ENSSBOG00000029672	CRNKL1	97	86.036	Saimiri_boliviensis_boliviensis
ENSPREG00000012615	crnkl1	88	68.939	ENSSHAG00000011199	CRNKL1	99	69.102	Sarcophilus_harrisii
ENSPREG00000012615	crnkl1	89	89.894	ENSSFOG00015000946	crnkl1	87	89.655	Scleropages_formosus
ENSPREG00000012615	crnkl1	98	87.364	ENSSMAG00000007933	crnkl1	87	93.572	Scophthalmus_maximus
ENSPREG00000012615	crnkl1	97	81.944	ENSSDUG00000012625	crnkl1	86	86.697	Seriola_dumerili
ENSPREG00000012615	crnkl1	97	89.271	ENSSLDG00000021413	crnkl1	96	90.719	Seriola_lalandi_dorsalis
ENSPREG00000012615	crnkl1	92	84.064	ENSSARG00000006443	CRNKL1	80	85.886	Sorex_araneus
ENSPREG00000012615	crnkl1	92	85.066	ENSSPUG00000005254	CRNKL1	97	86.807	Sphenodon_punctatus
ENSPREG00000012615	crnkl1	96	90.871	ENSSPAG00000016150	crnkl1	100	91.154	Stegastes_partitus
ENSPREG00000012615	crnkl1	91	85.926	ENSSSCG00000038587	CRNKL1	96	86.787	Sus_scrofa
ENSPREG00000012615	crnkl1	92	84.548	ENSTGUG00000007645	CRNKL1	96	86.377	Taeniopygia_guttata
ENSPREG00000012615	crnkl1	90	86.830	ENSTRUG00000015417	crnkl1	88	87.211	Takifugu_rubripes
ENSPREG00000012615	crnkl1	90	89.371	ENSTNIG00000010710	crnkl1	99	90.603	Tetraodon_nigroviridis
ENSPREG00000012615	crnkl1	84	84.320	ENSTBEG00000001304	CRNKL1	82	84.444	Tupaia_belangeri
ENSPREG00000012615	crnkl1	84	82.080	ENSTTRG00000000484	CRNKL1	81	82.222	Tursiops_truncatus
ENSPREG00000012615	crnkl1	92	84.942	ENSUAMG00000018586	CRNKL1	97	86.787	Ursus_americanus
ENSPREG00000012615	crnkl1	92	84.942	ENSUMAG00000024957	CRNKL1	97	86.787	Ursus_maritimus
ENSPREG00000012615	crnkl1	91	84.831	ENSVVUG00000012559	CRNKL1	78	89.247	Vulpes_vulpes
ENSPREG00000012615	crnkl1	92	84.884	ENSXETG00000009698	crnkl1	97	86.826	Xenopus_tropicalis
ENSPREG00000012615	crnkl1	100	96.000	ENSXCOG00000000824	crnkl1	100	96.000	Xiphophorus_couchianus
ENSPREG00000012615	crnkl1	100	96.796	ENSXMAG00000006896	crnkl1	100	96.796	Xiphophorus_maculatus