EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000012779 (Gene tree)
Gene ID: -
Gene Symbol: fam83fa
Alias: -
Full Name: protein FAM83F-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 9370 bases
Position: chrLG8:27703649-27713018
Accession: 103469446
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000018906	FAM83	PF07894.12	9.7e-85	1	2
ENSPREP00000018906	FAM83	PF07894.12	9.7e-85	2	2
ENSPREP00000018883	FAM83	PF07894.12	7e-59	1	1
ENSPREP00000018912	FAM83	PF07894.12	1.2e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000019110	-	1404	XM_017306149	ENSPREP00000018906	467 (aa)	XP_017161638	-
ENSPRET00000019088	-	1002	-	ENSPREP00000018883	333 (aa)	-	-
ENSPRET00000019116	-	1260	-	ENSPREP00000018912	419 (aa)	-	-

Gene Model

Click here to download ENSPREG00000012779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000012779's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000012779	fam83fa	55	38.462	ENSPREG00000021538	-	57	37.052
ENSPREG00000012779	fam83fa	57	35.468	ENSPREG00000022272	fam83d	51	33.935
ENSPREG00000012779	fam83fa	76	35.427	ENSPREG00000016191	-	70	35.930
ENSPREG00000012779	fam83fa	79	56.506	ENSPREG00000000170	fam83fb	74	50.532

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000012779	fam83fa	97	63.876	ENSAPOG00000002100	fam83fa	98	60.153	Acanthochromis_polyacanthus
ENSPREG00000012779	fam83fa	98	44.976	ENSAPOG00000013954	fam83fb	96	45.087	Acanthochromis_polyacanthus
ENSPREG00000012779	fam83fa	58	34.828	ENSAPOG00000018052	fam83e	67	34.828	Acanthochromis_polyacanthus
ENSPREG00000012779	fam83fa	62	52.133	ENSAPOG00000018240	-	87	46.484	Acanthochromis_polyacanthus
ENSPREG00000012779	fam83fa	96	64.096	ENSACIG00000013934	fam83fa	98	61.464	Amphilophus_citrinellus
ENSPREG00000012779	fam83fa	84	54.296	ENSACIG00000018205	fam83fb	82	56.391	Amphilophus_citrinellus
ENSPREG00000012779	fam83fa	97	63.397	ENSAOCG00000001182	fam83fa	98	59.962	Amphiprion_ocellaris
ENSPREG00000012779	fam83fa	95	46.192	ENSAOCG00000011974	fam83fb	96	44.788	Amphiprion_ocellaris
ENSPREG00000012779	fam83fa	96	64.337	ENSAPEG00000020202	fam83fa	97	60.501	Amphiprion_percula
ENSPREG00000012779	fam83fa	95	46.437	ENSAPEG00000008303	fam83fb	96	45.367	Amphiprion_percula
ENSPREG00000012779	fam83fa	59	60.101	ENSATEG00000002522	fam83fb	62	57.191	Anabas_testudineus
ENSPREG00000012779	fam83fa	97	60.476	ENSATEG00000020738	fam83fa	98	58.700	Anabas_testudineus
ENSPREG00000012779	fam83fa	95	45.721	ENSACLG00000008136	fam83fb	96	44.380	Astatotilapia_calliptera
ENSPREG00000012779	fam83fa	56	38.503	ENSACLG00000015221	fam83e	60	36.237	Astatotilapia_calliptera
ENSPREG00000012779	fam83fa	96	65.155	ENSACLG00000021073	fam83fa	98	61.977	Astatotilapia_calliptera
ENSPREG00000012779	fam83fa	65	34.663	ENSAMXG00000003691	fam83e	51	34.663	Astyanax_mexicanus
ENSPREG00000012779	fam83fa	79	62.030	ENSAMXG00000013516	fam83fa	63	54.688	Astyanax_mexicanus
ENSPREG00000012779	fam83fa	85	52.778	ENSAMXG00000032119	fam83fb	87	41.571	Astyanax_mexicanus
ENSPREG00000012779	fam83fa	78	59.245	ENSCSEG00000001431	fam83fb	81	50.119	Cynoglossus_semilaevis
ENSPREG00000012779	fam83fa	58	34.828	ENSCSEG00000021696	-	70	34.828	Cynoglossus_semilaevis
ENSPREG00000012779	fam83fa	96	61.758	ENSCSEG00000020530	fam83fa	99	61.758	Cynoglossus_semilaevis
ENSPREG00000012779	fam83fa	78	56.015	ENSCVAG00000011517	fam83fb	97	43.208	Cyprinodon_variegatus
ENSPREG00000012779	fam83fa	97	68.900	ENSCVAG00000002014	fam83fa	98	64.751	Cyprinodon_variegatus
ENSPREG00000012779	fam83fa	78	54.340	ENSDARG00000104188	fam83fb	81	47.268	Danio_rerio
ENSPREG00000012779	fam83fa	97	47.826	ENSDARG00000038012	fam83fa	97	47.826	Danio_rerio
ENSPREG00000012779	fam83fa	92	59.688	ENSELUG00000018573	fam83fa	97	49.040	Esox_lucius
ENSPREG00000012779	fam83fa	96	48.317	ENSELUG00000020195	fam83fb	97	47.992	Esox_lucius
ENSPREG00000012779	fam83fa	75	59.608	ENSFHEG00000008722	fam83fb	98	46.914	Fundulus_heteroclitus
ENSPREG00000012779	fam83fa	97	67.233	ENSFHEG00000015048	fam83fa	98	64.729	Fundulus_heteroclitus
ENSPREG00000012779	fam83fa	95	46.059	ENSGAFG00000011468	fam83fb	96	44.078	Gambusia_affinis
ENSPREG00000012779	fam83fa	97	84.390	ENSGAFG00000016700	fam83fa	98	80.350	Gambusia_affinis
ENSPREG00000012779	fam83fa	96	65.155	ENSHBUG00000017286	fam83fa	98	61.787	Haplochromis_burtoni
ENSPREG00000012779	fam83fa	56	38.503	ENSHBUG00000003284	fam83e	56	36.237	Haplochromis_burtoni
ENSPREG00000012779	fam83fa	95	45.874	ENSHBUG00000009368	fam83fb	96	44.487	Haplochromis_burtoni
ENSPREG00000012779	fam83fa	62	33.750	ENSHCOG00000020513	fam83e	78	33.750	Hippocampus_comes
ENSPREG00000012779	fam83fa	95	45.792	ENSHCOG00000009657	fam83fb	96	45.117	Hippocampus_comes
ENSPREG00000012779	fam83fa	75	58.268	ENSIPUG00000017393	fam83fb	95	41.633	Ictalurus_punctatus
ENSPREG00000012779	fam83fa	95	50.000	ENSIPUG00000013473	fam83fa	85	48.846	Ictalurus_punctatus
ENSPREG00000012779	fam83fa	86	53.041	ENSKMAG00000011443	fam83fb	92	46.764	Kryptolebias_marmoratus
ENSPREG00000012779	fam83fa	100	61.717	ENSKMAG00000007053	fam83fa	96	58.505	Kryptolebias_marmoratus
ENSPREG00000012779	fam83fa	98	46.957	ENSLBEG00000011997	fam83fb	98	44.318	Labrus_bergylta
ENSPREG00000012779	fam83fa	95	63.184	ENSLBEG00000005198	fam83fa	97	60.895	Labrus_bergylta
ENSPREG00000012779	fam83fa	97	46.212	ENSLOCG00000011357	fam83fb	97	46.212	Lepisosteus_oculatus
ENSPREG00000012779	fam83fa	61	31.646	ENSMAMG00000015460	fam83e	50	31.646	Mastacembelus_armatus
ENSPREG00000012779	fam83fa	97	61.261	ENSMAMG00000020194	fam83fa	97	59.195	Mastacembelus_armatus
ENSPREG00000012779	fam83fa	94	46.798	ENSMAMG00000004682	fam83fb	96	45.331	Mastacembelus_armatus
ENSPREG00000012779	fam83fa	95	45.721	ENSMZEG00005019183	fam83fb	96	44.380	Maylandia_zebra
ENSPREG00000012779	fam83fa	96	65.155	ENSMZEG00005023302	fam83fa	98	61.977	Maylandia_zebra
ENSPREG00000012779	fam83fa	56	38.503	ENSMZEG00005014446	fam83e	68	36.237	Maylandia_zebra
ENSPREG00000012779	fam83fa	58	32.872	ENSMMOG00000010801	fam83e	59	32.872	Mola_mola
ENSPREG00000012779	fam83fa	97	63.312	ENSMMOG00000021541	fam83fa	99	61.071	Mola_mola
ENSPREG00000012779	fam83fa	86	51.712	ENSMMOG00000011136	fam83fb	94	52.443	Mola_mola
ENSPREG00000012779	fam83fa	96	41.379	ENSMALG00000015816	fam83fb	99	42.176	Monopterus_albus
ENSPREG00000012779	fam83fa	96	59.856	ENSMALG00000019513	fam83fa	100	58.574	Monopterus_albus
ENSPREG00000012779	fam83fa	58	33.681	ENSMALG00000003488	fam83e	69	33.681	Monopterus_albus
ENSPREG00000012779	fam83fa	81	71.429	ENSNBRG00000011270	fam83fa	88	70.175	Neolamprologus_brichardi
ENSPREG00000012779	fam83fa	78	56.180	ENSNBRG00000011999	fam83fb	79	55.472	Neolamprologus_brichardi
ENSPREG00000012779	fam83fa	56	38.503	ENSNBRG00000020386	fam83e	71	35.889	Neolamprologus_brichardi
ENSPREG00000012779	fam83fa	96	65.394	ENSONIG00000009702	fam83fa	98	62.167	Oreochromis_niloticus
ENSPREG00000012779	fam83fa	78	55.431	ENSONIG00000016936	fam83fb	100	55.263	Oreochromis_niloticus
ENSPREG00000012779	fam83fa	96	63.070	ENSORLG00000001401	fam83fa	97	60.269	Oryzias_latipes
ENSPREG00000012779	fam83fa	97	43.373	ENSORLG00000010844	fam83fb	98	41.491	Oryzias_latipes
ENSPREG00000012779	fam83fa	97	43.614	ENSORLG00020007895	fam83fb	98	41.683	Oryzias_latipes_hni
ENSPREG00000012779	fam83fa	96	62.590	ENSORLG00020013985	fam83fa	97	59.885	Oryzias_latipes_hni
ENSPREG00000012779	fam83fa	96	62.019	ENSORLG00015007009	fam83fa	97	59.693	Oryzias_latipes_hsok
ENSPREG00000012779	fam83fa	58	34.021	ENSORLG00015016008	fam83e	69	34.021	Oryzias_latipes_hsok
ENSPREG00000012779	fam83fa	97	43.373	ENSORLG00015007142	fam83fb	98	41.683	Oryzias_latipes_hsok
ENSPREG00000012779	fam83fa	96	61.631	ENSOMEG00000017221	fam83fa	97	60.305	Oryzias_melastigma
ENSPREG00000012779	fam83fa	98	44.471	ENSOMEG00000015967	fam83fb	98	42.226	Oryzias_melastigma
ENSPREG00000012779	fam83fa	96	50.000	ENSPKIG00000003519	fam83fa	97	49.609	Paramormyrops_kingsleyae
ENSPREG00000012779	fam83fa	97	44.048	ENSPKIG00000013672	fam83fb	97	42.692	Paramormyrops_kingsleyae
ENSPREG00000012779	fam83fa	65	33.616	ENSPKIG00000013011	-	59	37.572	Paramormyrops_kingsleyae
ENSPREG00000012779	fam83fa	58	35.842	ENSPMGG00000023523	fam83e	66	35.842	Periophthalmus_magnuspinnatus
ENSPREG00000012779	fam83fa	81	64.260	ENSPMGG00000011794	fam83fa	96	48.142	Periophthalmus_magnuspinnatus
ENSPREG00000012779	fam83fa	78	56.604	ENSPFOG00000014672	fam83fb	90	56.015	Poecilia_formosa
ENSPREG00000012779	fam83fa	97	85.854	ENSPFOG00000007236	fam83fa	98	81.323	Poecilia_formosa
ENSPREG00000012779	fam83fa	97	86.098	ENSPLAG00000010997	fam83fa	98	81.518	Poecilia_latipinna
ENSPREG00000012779	fam83fa	78	56.604	ENSPLAG00000002530	-	73	50.938	Poecilia_latipinna
ENSPREG00000012779	fam83fa	78	56.604	ENSPMEG00000020267	fam83fb	73	51.206	Poecilia_mexicana
ENSPREG00000012779	fam83fa	97	85.854	ENSPMEG00000018863	fam83fa	98	81.323	Poecilia_mexicana
ENSPREG00000012779	fam83fa	56	37.968	ENSPNYG00000017820	fam83e	59	35.889	Pundamilia_nyererei
ENSPREG00000012779	fam83fa	97	64.455	ENSPNYG00000011832	fam83fa	98	61.787	Pundamilia_nyererei
ENSPREG00000012779	fam83fa	95	45.854	ENSPNYG00000015309	fam83fb	98	44.487	Pundamilia_nyererei
ENSPREG00000012779	fam83fa	79	63.433	ENSPNAG00000026031	fam83fa	64	53.898	Pygocentrus_nattereri
ENSPREG00000012779	fam83fa	82	54.710	ENSPNAG00000024206	fam83fb	96	42.540	Pygocentrus_nattereri
ENSPREG00000012779	fam83fa	74	53.360	ENSSFOG00015023820	fam83fb	96	41.494	Scleropages_formosus
ENSPREG00000012779	fam83fa	95	51.946	ENSSFOG00015010079	fam83f	94	56.296	Scleropages_formosus
ENSPREG00000012779	fam83fa	97	46.523	ENSSMAG00000021148	fam83fb	98	45.229	Scophthalmus_maximus
ENSPREG00000012779	fam83fa	61	33.444	ENSSMAG00000015122	fam83e	76	33.444	Scophthalmus_maximus
ENSPREG00000012779	fam83fa	96	60.526	ENSSMAG00000013899	fam83fa	97	59.423	Scophthalmus_maximus
ENSPREG00000012779	fam83fa	97	62.470	ENSSDUG00000023214	fam83fa	98	60.762	Seriola_dumerili
ENSPREG00000012779	fam83fa	97	46.190	ENSSDUG00000012069	fam83fb	98	44.030	Seriola_dumerili
ENSPREG00000012779	fam83fa	97	45.107	ENSSLDG00000020926	fam83fb	98	42.964	Seriola_lalandi_dorsalis
ENSPREG00000012779	fam83fa	97	61.995	ENSSLDG00000006950	fam83fa	98	60.381	Seriola_lalandi_dorsalis
ENSPREG00000012779	fam83fa	85	55.903	ENSSPAG00000004922	fam83fb	83	49.652	Stegastes_partitus
ENSPREG00000012779	fam83fa	97	64.354	ENSSPAG00000004902	fam83fa	98	61.111	Stegastes_partitus
ENSPREG00000012779	fam83fa	80	53.846	ENSTRUG00000012517	fam83fb	88	42.537	Takifugu_rubripes
ENSPREG00000012779	fam83fa	97	60.570	ENSTRUG00000024905	fam83fa	98	59.238	Takifugu_rubripes
ENSPREG00000012779	fam83fa	80	49.259	ENSTNIG00000018819	fam83fb	90	52.825	Tetraodon_nigroviridis
ENSPREG00000012779	fam83fa	81	62.500	ENSTNIG00000011260	fam83fa	100	59.355	Tetraodon_nigroviridis
ENSPREG00000012779	fam83fa	58	30.796	ENSXCOG00000013498	fam83e	64	30.796	Xiphophorus_couchianus
ENSPREG00000012779	fam83fa	95	46.040	ENSXCOG00000015914	fam83fb	98	44.510	Xiphophorus_couchianus
ENSPREG00000012779	fam83fa	97	83.415	ENSXMAG00000024063	fam83fa	98	79.767	Xiphophorus_maculatus
ENSPREG00000012779	fam83fa	95	45.679	ENSXMAG00000010041	fam83fb	98	43.470	Xiphophorus_maculatus