EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPREG00000012886 (Gene tree)
Gene ID
103469051
Gene Symbol
rbfox3b
Alias
rbfox3l|si:ch73-322f21.1
Full Name
RNA binding protein fox-1 homolog 3
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Plus strand
Length
467973 bases
Position
chrLG8:19717016-20184988
Accession
103469051
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000019039Fox-1_CPF12414.85.2e-4311
ENSPREP00000019047Fox-1_CPF12414.85.2e-4311
ENSPREP00000019105Fox-1_CPF12414.87.4e-4311
ENSPREP00000019080Fox-1_CPF12414.88.7e-4311
ENSPREP00000019157Fox-1_CPF12414.83.2e-2811
ENSPREP00000019157RRM_1PF00076.221.5e-1811
ENSPREP00000019105RRM_1PF00076.221.5e-1811
ENSPREP00000019039RRM_1PF00076.221.6e-1811
ENSPREP00000019047RRM_1PF00076.221.6e-1811
ENSPREP00000019080RRM_1PF00076.221.6e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000019245-1372-ENSPREP00000019039371 (aa)--
ENSPRET00000019363-4540-ENSPREP00000019157344 (aa)--
ENSPRET00000019253-1370XM_008416518ENSPREP00000019047371 (aa)XP_008414740-
ENSPRET00000019311-4599-ENSPREP00000019105348 (aa)--
ENSPRET00000019286-1110XM_008416527ENSPREP00000019080369 (aa)XP_008414749-
Gene Model
Click here to download ENSPREG00000012886's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000012886's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPREG00000012886rbfox3b5663.063ENSPREG00000012955rbfox29564.000
ENSPREG00000012886rbfox3b8257.426ENSPREG00000007940rbfox1l9751.743
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000012886rbfox3b8680.333ENSG00000167281RBFOX310083.175Homo_sapiens
ENSPREG00000012886rbfox3b10098.922ENSAPOG00000021630rbfox3b10099.454Acanthochromis_polyacanthus
ENSPREG00000012886rbfox3b10070.430ENSAPOG00000015658-9270.430Acanthochromis_polyacanthus
ENSPREG00000012886rbfox3b9376.812ENSAMEG00000014170RBFOX38977.493Ailuropoda_melanoleuca
ENSPREG00000012886rbfox3b8969.909ENSACIG00000003768-9070.642Amphilophus_citrinellus
ENSPREG00000012886rbfox3b9095.208ENSACIG00000010817rbfox3b10094.937Amphilophus_citrinellus
ENSPREG00000012886rbfox3b9999.457ENSAOCG00000012358rbfox3b10099.457Amphiprion_ocellaris
ENSPREG00000012886rbfox3b10080.054ENSAOCG00000010786-9880.593Amphiprion_ocellaris
ENSPREG00000012886rbfox3b9574.576ENSAPEG00000015891-8974.515Amphiprion_percula
ENSPREG00000012886rbfox3b10090.244ENSAPEG00000019081rbfox3b10090.244Amphiprion_percula
ENSPREG00000012886rbfox3b8679.070ENSATEG00000023101-9779.310Anabas_testudineus
ENSPREG00000012886rbfox3b9089.504ENSATEG00000019945rbfox3b9989.565Anabas_testudineus
ENSPREG00000012886rbfox3b9780.780ENSACAG00000016093RBFOX39982.451Anolis_carolinensis
ENSPREG00000012886rbfox3b8680.000ENSANAG00000023457RBFOX310082.857Aotus_nancymaae
ENSPREG00000012886rbfox3b9982.065ENSACLG00000025552-10082.609Astatotilapia_calliptera
ENSPREG00000012886rbfox3b10098.118ENSACLG00000020011rbfox3b10098.408Astatotilapia_calliptera
ENSPREG00000012886rbfox3b9686.158ENSAMXG00000042841rbfox3b10086.158Astyanax_mexicanus
ENSPREG00000012886rbfox3b10083.684ENSAMXG00000037246rbfox3a10085.753Astyanax_mexicanus
ENSPREG00000012886rbfox3b7382.353ENSBTAG00000006280RBFOX310064.088Bos_taurus
ENSPREG00000012886rbfox3b8675.251ENSCJAG00000009563RBFOX310071.547Callithrix_jacchus
ENSPREG00000012886rbfox3b6984.647ENSCAFG00000005547RBFOX38587.448Canis_familiaris
ENSPREG00000012886rbfox3b8668.300ENSCAFG00020008126RBFOX39771.781Canis_lupus_dingo
ENSPREG00000012886rbfox3b8668.300ENSCHIG00000009124RBFOX39771.781Capra_hircus
ENSPREG00000012886rbfox3b8668.391ENSTSYG00000029617RBFOX310071.901Carlito_syrichta
ENSPREG00000012886rbfox3b8669.714ENSCPOG00000021703RBFOX310071.507Cavia_porcellus
ENSPREG00000012886rbfox3b8680.000ENSCCAG00000028450RBFOX310082.857Cebus_capucinus
ENSPREG00000012886rbfox3b8680.333ENSCATG00000018349RBFOX310083.175Cercocebus_atys
ENSPREG00000012886rbfox3b8670.115ENSCLAG00000006449RBFOX310071.901Chinchilla_lanigera
ENSPREG00000012886rbfox3b8680.333ENSCSAG00000002355RBFOX310083.175Chlorocebus_sabaeus
ENSPREG00000012886rbfox3b9384.259ENSCPBG00000010904RBFOX310084.345Chrysemys_picta_bellii
ENSPREG00000012886rbfox3b8680.333ENSCANG00000043120RBFOX310083.175Colobus_angolensis_palliatus
ENSPREG00000012886rbfox3b8668.195ENSCGRG00001019476Rbfox310071.703Cricetulus_griseus_chok1gshd
ENSPREG00000012886rbfox3b8668.195ENSCGRG00000003268Rbfox310071.703Cricetulus_griseus_crigri
ENSPREG00000012886rbfox3b9978.049ENSCSEG00000020606RBFOX310078.049Cynoglossus_semilaevis
ENSPREG00000012886rbfox3b9980.000ENSCSEG00000015567RBFOX39880.811Cynoglossus_semilaevis
ENSPREG00000012886rbfox3b9999.457ENSCVAG00000006882rbfox3b10099.457Cyprinodon_variegatus
ENSPREG00000012886rbfox3b9078.662ENSDARG00000074310rbfox3b9779.911Danio_rerio
ENSPREG00000012886rbfox3b9984.367ENSDARG00000010083rbfox3a10086.523Danio_rerio
ENSPREG00000012886rbfox3b6969.097ENSDNOG00000039391RBFOX39660.108Dasypus_novemcinctus
ENSPREG00000012886rbfox3b8663.478ENSDORG00000005352Rbfox310063.056Dipodomys_ordii
ENSPREG00000012886rbfox3b8854.890ENSEBUG00000013559RBFOX38854.206Eptatretus_burgeri
ENSPREG00000012886rbfox3b9468.222ENSEBUG00000002129RBFOX39668.513Eptatretus_burgeri
ENSPREG00000012886rbfox3b8680.464ENSEASG00005005059RBFOX310082.650Equus_asinus_asinus
ENSPREG00000012886rbfox3b8680.132ENSECAG00000023811RBFOX310082.334Equus_caballus
ENSPREG00000012886rbfox3b7676.410ENSEEUG00000013974RBFOX37286.885Erinaceus_europaeus
ENSPREG00000012886rbfox3b10094.340ENSELUG00000017963rbfox3b10094.565Esox_lucius
ENSPREG00000012886rbfox3b5663.452ENSELUG00000009807-6455.111Esox_lucius
ENSPREG00000012886rbfox3b9780.000ENSFCAG00000002555RBFOX310082.222Felis_catus
ENSPREG00000012886rbfox3b9368.715ENSFALG00000012288RBFOX39068.665Ficedula_albicollis
ENSPREG00000012886rbfox3b8664.286ENSFDAG00000007489RBFOX310066.301Fukomys_damarensis
ENSPREG00000012886rbfox3b9089.776ENSFHEG00000008550rbfox3b10089.776Fundulus_heteroclitus
ENSPREG00000012886rbfox3b9067.590ENSGMOG00000019304-9768.132Gadus_morhua
ENSPREG00000012886rbfox3b9782.730ENSGALG00000032889RBFOX39984.637Gallus_gallus
ENSPREG00000012886rbfox3b9992.663ENSGAFG00000005025rbfox3b10092.663Gambusia_affinis
ENSPREG00000012886rbfox3b8669.628ENSGACG00000002138-9771.390Gasterosteus_aculeatus
ENSPREG00000012886rbfox3b9883.889ENSGAGG00000020025RBFOX310084.345Gopherus_agassizii
ENSPREG00000012886rbfox3b8680.333ENSGGOG00000012546RBFOX310083.175Gorilla_gorilla
ENSPREG00000012886rbfox3b10098.383ENSHBUG00000018099rbfox3b10098.913Haplochromis_burtoni
ENSPREG00000012886rbfox3b9580.838ENSHBUG00000023098-9681.548Haplochromis_burtoni
ENSPREG00000012886rbfox3b8669.034ENSHGLG00000008679RBFOX310070.572Heterocephalus_glaber_female
ENSPREG00000012886rbfox3b8665.909ENSHGLG00100014739RBFOX39767.297Heterocephalus_glaber_male
ENSPREG00000012886rbfox3b9879.452ENSHCOG00000007444RBFOX39379.348Hippocampus_comes
ENSPREG00000012886rbfox3b9074.441ENSHCOG00000001863RBFOX39375.079Hippocampus_comes
ENSPREG00000012886rbfox3b9073.333ENSIPUG00000021966rbfox3b9885.283Ictalurus_punctatus
ENSPREG00000012886rbfox3b10081.842ENSIPUG00000012010rbfox3a10084.636Ictalurus_punctatus
ENSPREG00000012886rbfox3b8663.934ENSSTOG00000026817RBFOX310066.875Ictidomys_tridecemlineatus
ENSPREG00000012886rbfox3b8667.435ENSJJAG00000014167Rbfox310072.099Jaculus_jaculus
ENSPREG00000012886rbfox3b9999.457ENSKMAG00000006726rbfox3b10099.457Kryptolebias_marmoratus
ENSPREG00000012886rbfox3b10098.916ENSLBEG00000004030rbfox3b10099.454Labrus_bergylta
ENSPREG00000012886rbfox3b9986.141ENSLBEG00000022508-10085.054Labrus_bergylta
ENSPREG00000012886rbfox3b5361.290ENSLACG00000000021-9561.290Latimeria_chalumnae
ENSPREG00000012886rbfox3b9371.831ENSLACG00000018409-9174.022Latimeria_chalumnae
ENSPREG00000012886rbfox3b9388.957ENSLOCG00000012267rbfox3a9891.104Lepisosteus_oculatus
ENSPREG00000012886rbfox3b9374.157ENSLAFG00000016623RBFOX39771.507Loxodonta_africana
ENSPREG00000012886rbfox3b8668.300ENSMFAG00000002247RBFOX310071.823Macaca_fascicularis
ENSPREG00000012886rbfox3b8680.333ENSMMUG00000023028RBFOX310083.175Macaca_mulatta
ENSPREG00000012886rbfox3b8680.000ENSMNEG00000041147RBFOX310082.857Macaca_nemestrina
ENSPREG00000012886rbfox3b8680.333ENSMLEG00000025686RBFOX310083.175Mandrillus_leucophaeus
ENSPREG00000012886rbfox3b9087.859ENSMAMG00000019810rbfox3b10087.342Mastacembelus_armatus
ENSPREG00000012886rbfox3b9380.428ENSMAMG00000020600-9479.635Mastacembelus_armatus
ENSPREG00000012886rbfox3b8662.952ENSMZEG00005003055-8162.611Maylandia_zebra
ENSPREG00000012886rbfox3b10098.383ENSMZEG00005000781rbfox3b10098.907Maylandia_zebra
ENSPREG00000012886rbfox3b6581.081ENSMGAG00000005600RBFOX38381.818Meleagris_gallopavo
ENSPREG00000012886rbfox3b8669.540ENSMAUG00000013543Rbfox310071.350Mesocricetus_auratus
ENSPREG00000012886rbfox3b9381.790ENSMICG00000014898RBFOX310082.166Microcebus_murinus
ENSPREG00000012886rbfox3b8667.241ENSMOCG00000015373Rbfox310070.799Microtus_ochrogaster
ENSPREG00000012886rbfox3b9997.297ENSMMOG00000020193rbfox3b10097.297Mola_mola
ENSPREG00000012886rbfox3b9780.780ENSMODG00000002089RBFOX39982.730Monodelphis_domestica
ENSPREG00000012886rbfox3b9997.826ENSMALG00000020407rbfox3b10097.826Monopterus_albus
ENSPREG00000012886rbfox3b10083.288ENSMALG00000018270-10083.424Monopterus_albus
ENSPREG00000012886rbfox3b8678.738MGP_CAROLIEiJ_G0017487Rbfox39689.209Mus_caroli
ENSPREG00000012886rbfox3b8680.731ENSMUSG00000025576Rbfox39689.209Mus_musculus
ENSPREG00000012886rbfox3b8679.470MGP_PahariEiJ_G0018614Rbfox39689.928Mus_pahari
ENSPREG00000012886rbfox3b8679.070MGP_SPRETEiJ_G0018331Rbfox39689.209Mus_spretus
ENSPREG00000012886rbfox3b9372.527ENSMPUG00000012319RBFOX39673.514Mustela_putorius_furo
ENSPREG00000012886rbfox3b8668.391ENSNGAG00000018006Rbfox310072.176Nannospalax_galili
ENSPREG00000012886rbfox3b9997.826ENSNBRG00000010102rbfox3b10097.826Neolamprologus_brichardi
ENSPREG00000012886rbfox3b9575.301ENSNBRG00000022885-9275.000Neolamprologus_brichardi
ENSPREG00000012886rbfox3b9056.369ENSNLEG00000000153-9656.825Nomascus_leucogenys
ENSPREG00000012886rbfox3b8385.106ENSMEUG00000004218-10054.294Notamacropus_eugenii
ENSPREG00000012886rbfox3b7277.202ENSOPRG00000016279-7181.667Ochotona_princeps
ENSPREG00000012886rbfox3b8682.060ENSODEG00000009433RBFOX310082.595Octodon_degus
ENSPREG00000012886rbfox3b9999.728ENSONIG00000009549rbfox3b10099.728Oreochromis_niloticus
ENSPREG00000012886rbfox3b9581.325ENSONIG00000007282-9980.588Oreochromis_niloticus
ENSPREG00000012886rbfox3b6962.544ENSOCUG00000014217RBFOX37762.989Oryctolagus_cuniculus
ENSPREG00000012886rbfox3b10098.113ENSORLG00000000905rbfox3b7997.820Oryzias_latipes
ENSPREG00000012886rbfox3b10098.113ENSORLG00020018030rbfox3b9997.820Oryzias_latipes_hni
ENSPREG00000012886rbfox3b9998.913ENSORLG00015009200rbfox3b10098.913Oryzias_latipes_hsok
ENSPREG00000012886rbfox3b8493.313ENSOMEG00000014677rbfox3b8693.313Oryzias_melastigma
ENSPREG00000012886rbfox3b9479.091ENSOGAG00000029595RBFOX38881.212Otolemur_garnettii
ENSPREG00000012886rbfox3b9260.172ENSOARG00000002908RBFOX38960.745Ovis_aries
ENSPREG00000012886rbfox3b7382.353ENSPPAG00000025383RBFOX39982.292Pan_paniscus
ENSPREG00000012886rbfox3b8667.449ENSPPRG00000007819RBFOX310071.910Panthera_pardus
ENSPREG00000012886rbfox3b8680.333ENSPTRG00000009727RBFOX310083.175Pan_troglodytes
ENSPREG00000012886rbfox3b8680.333ENSPANG00000019837RBFOX310083.175Papio_anubis
ENSPREG00000012886rbfox3b9471.212ENSPKIG00000022633-9768.871Paramormyrops_kingsleyae
ENSPREG00000012886rbfox3b10088.064ENSPKIG00000010299rbfox3a9988.473Paramormyrops_kingsleyae
ENSPREG00000012886rbfox3b8792.284ENSPMGG00000008000rbfox3b10091.975Periophthalmus_magnuspinnatus
ENSPREG00000012886rbfox3b8667.816ENSPEMG00000010500Rbfox310071.350Peromyscus_maniculatus_bairdii
ENSPREG00000012886rbfox3b5074.737ENSPMAG00000008689rbfox3b9476.166Petromyzon_marinus
ENSPREG00000012886rbfox3b9771.921ENSPCIG00000005766RBFOX310073.885Phascolarctos_cinereus
ENSPREG00000012886rbfox3b10098.922ENSPFOG00000018294rbfox3b9798.922Poecilia_formosa
ENSPREG00000012886rbfox3b6994.167ENSPLAG00000000481rbfox3b7593.416Poecilia_latipinna
ENSPREG00000012886rbfox3b9089.457ENSPMEG00000022997rbfox3b10089.457Poecilia_mexicana
ENSPREG00000012886rbfox3b8176.241ENSPPYG00000008704RBFOX38876.000Pongo_abelii
ENSPREG00000012886rbfox3b8665.130ENSPCAG00000001401RBFOX310064.641Procavia_capensis
ENSPREG00000012886rbfox3b9068.785ENSPCOG00000012689RBFOX310070.994Propithecus_coquereli
ENSPREG00000012886rbfox3b8659.195ENSPVAG00000015243RBFOX310063.361Pteropus_vampyrus
ENSPREG00000012886rbfox3b10086.757ENSPNYG00000010414rbfox3b10086.757Pundamilia_nyererei
ENSPREG00000012886rbfox3b10076.965ENSPNYG00000009079-9777.089Pundamilia_nyererei
ENSPREG00000012886rbfox3b10083.467ENSPNAG00000002889rbfox3a10086.207Pygocentrus_nattereri
ENSPREG00000012886rbfox3b9070.607ENSPNAG00000018173rbfox3b9170.794Pygocentrus_nattereri
ENSPREG00000012886rbfox3b8679.470ENSRNOG00000003386Rbfox310082.019Rattus_norvegicus
ENSPREG00000012886rbfox3b9780.278ENSRBIG00000040449RBFOX39982.222Rhinopithecus_bieti
ENSPREG00000012886rbfox3b8680.333ENSRROG00000000766RBFOX310083.175Rhinopithecus_roxellana
ENSPREG00000012886rbfox3b8680.000ENSSBOG00000031591RBFOX310082.857Saimiri_boliviensis_boliviensis
ENSPREG00000012886rbfox3b9375.140ENSSHAG00000016076RBFOX310073.885Sarcophilus_harrisii
ENSPREG00000012886rbfox3b10086.472ENSSFOG00015023260rbfox3a10088.770Scleropages_formosus
ENSPREG00000012886rbfox3b9773.259ENSSFOG00015004716RBFOX39972.452Scleropages_formosus
ENSPREG00000012886rbfox3b9995.573ENSSMAG00000012618rbfox3b8795.573Scophthalmus_maximus
ENSPREG00000012886rbfox3b9982.065ENSSMAG00000019052-10083.175Scophthalmus_maximus
ENSPREG00000012886rbfox3b10077.089ENSSDUG00000015801-9976.819Seriola_dumerili
ENSPREG00000012886rbfox3b9089.776ENSSDUG00000023183rbfox3b10089.776Seriola_dumerili
ENSPREG00000012886rbfox3b10080.323ENSSLDG00000016098-9980.054Seriola_lalandi_dorsalis
ENSPREG00000012886rbfox3b9999.728ENSSLDG00000000149rbfox3b10099.728Seriola_lalandi_dorsalis
ENSPREG00000012886rbfox3b9774.722ENSSPUG00000011733RBFOX39984.444Sphenodon_punctatus
ENSPREG00000012886rbfox3b7877.289ENSSPAG00000004898-8577.778Stegastes_partitus
ENSPREG00000012886rbfox3b10090.786ENSSPAG00000017571rbfox3b10090.786Stegastes_partitus
ENSPREG00000012886rbfox3b7880.882ENSSSCG00000039498RBFOX39770.807Sus_scrofa
ENSPREG00000012886rbfox3b9588.824ENSTRUG00000004894rbfox3b9588.235Takifugu_rubripes
ENSPREG00000012886rbfox3b9588.089ENSTNIG00000011278rbfox3b9187.363Tetraodon_nigroviridis
ENSPREG00000012886rbfox3b7346.309ENSTBEG00000004296-7277.778Tupaia_belangeri
ENSPREG00000012886rbfox3b8662.536ENSTTRG00000003676RBFOX310066.298Tursiops_truncatus
ENSPREG00000012886rbfox3b8680.333ENSUAMG00000004668RBFOX310083.175Ursus_americanus
ENSPREG00000012886rbfox3b9780.609ENSVVUG00000017864RBFOX310082.857Vulpes_vulpes
ENSPREG00000012886rbfox3b9466.857ENSXETG00000020236rbfox38866.667Xenopus_tropicalis
ENSPREG00000012886rbfox3b9798.066ENSXCOG00000018262rbfox3b10098.066Xiphophorus_couchianus
ENSPREG00000012886rbfox3b10099.191ENSXMAG00000012939rbfox3b10099.728Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us