EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000012940 (Gene tree)
Gene ID: 103476240
Gene Symbol: nop16
Alias: zgc:92910
Full Name: NOP16 nucleolar protein
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 10868 bases
Position: chrLG14:21485626-21496493
Accession: 103476240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000019109	Nop16	PF09420.10	3.7e-19	1	2
ENSPREP00000019109	Nop16	PF09420.10	3.7e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000019316	-	534	XM_008428434	ENSPREP00000019109	177 (aa)	XP_008426656	UPI0004A4CEAF
ENSPRET00000019324	-	1240	-	ENSPREP00000019118	175 (aa)	-	-

Gene Model

Click here to download ENSPREG00000012940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000012940's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000012940	nop16	99	74.857	ENSAPOG00000010682	-	99	74.857	Acanthochromis_polyacanthus
ENSPREG00000012940	nop16	95	52.941	ENSAMEG00000006988	-	96	52.941	Ailuropoda_melanoleuca
ENSPREG00000012940	nop16	100	73.446	ENSACIG00000019263	nop16	100	73.446	Amphilophus_citrinellus
ENSPREG00000012940	nop16	99	76.000	ENSAOCG00000005504	nop16	99	76.000	Amphiprion_ocellaris
ENSPREG00000012940	nop16	99	76.000	ENSAPEG00000006605	nop16	99	76.000	Amphiprion_percula
ENSPREG00000012940	nop16	100	75.706	ENSATEG00000014089	nop16	100	75.706	Anabas_testudineus
ENSPREG00000012940	nop16	100	57.865	ENSACAG00000006333	-	99	57.865	Anolis_carolinensis
ENSPREG00000012940	nop16	95	51.176	ENSANAG00000015743	-	95	51.176	Aotus_nancymaae
ENSPREG00000012940	nop16	95	45.882	ENSANAG00000027410	-	95	45.882	Aotus_nancymaae
ENSPREG00000012940	nop16	100	72.316	ENSACLG00000025227	nop16	100	72.316	Astatotilapia_calliptera
ENSPREG00000012940	nop16	94	51.807	ENSAMXG00000006843	nop16	95	51.807	Astyanax_mexicanus
ENSPREG00000012940	nop16	95	54.118	ENSBTAG00000010734	NOP16	96	54.118	Bos_taurus
ENSPREG00000012940	nop16	95	51.765	ENSCAFG00000016694	NOP16	96	51.765	Canis_familiaris
ENSPREG00000012940	nop16	95	51.765	ENSCAFG00020011505	-	90	51.765	Canis_lupus_dingo
ENSPREG00000012940	nop16	95	54.118	ENSCHIG00000022082	-	96	54.118	Capra_hircus
ENSPREG00000012940	nop16	95	51.765	ENSTSYG00000030409	-	96	51.765	Carlito_syrichta
ENSPREG00000012940	nop16	98	44.828	ENSTSYG00000032690	-	98	44.828	Carlito_syrichta
ENSPREG00000012940	nop16	97	52.907	ENSCPOG00000026072	-	96	52.941	Cavia_porcellus
ENSPREG00000012940	nop16	90	49.068	ENSCCAG00000026775	-	94	49.068	Cebus_capucinus
ENSPREG00000012940	nop16	95	52.353	ENSCLAG00000015405	-	96	52.353	Chinchilla_lanigera
ENSPREG00000012940	nop16	95	52.941	ENSCSAG00000009400	-	96	52.941	Chlorocebus_sabaeus
ENSPREG00000012940	nop16	95	54.286	ENSCPBG00000022647	-	99	53.552	Chrysemys_picta_bellii
ENSPREG00000012940	nop16	95	38.150	ENSCING00000006179	-	93	38.150	Ciona_intestinalis
ENSPREG00000012940	nop16	95	39.306	ENSCSAVG00000000269	-	93	39.306	Ciona_savignyi
ENSPREG00000012940	nop16	95	52.353	ENSCGRG00001004259	Nop16	96	52.353	Cricetulus_griseus_chok1gshd
ENSPREG00000012940	nop16	95	52.353	ENSCGRG00000010975	Nop16	96	52.353	Cricetulus_griseus_crigri
ENSPREG00000012940	nop16	97	65.318	ENSCSEG00000020523	nop16	98	65.318	Cynoglossus_semilaevis
ENSPREG00000012940	nop16	100	84.181	ENSCVAG00000020140	nop16	100	84.181	Cyprinodon_variegatus
ENSPREG00000012940	nop16	97	52.874	ENSDARG00000044402	nop16	98	52.601	Danio_rerio
ENSPREG00000012940	nop16	95	52.663	ENSDNOG00000042890	-	95	52.663	Dasypus_novemcinctus
ENSPREG00000012940	nop16	97	54.023	ENSDORG00000008872	Nop16	96	54.023	Dipodomys_ordii
ENSPREG00000012940	nop16	93	45.349	ENSEBUG00000011196	nop16	95	45.349	Eptatretus_burgeri
ENSPREG00000012940	nop16	95	53.529	ENSEASG00005011988	-	96	53.529	Equus_asinus_asinus
ENSPREG00000012940	nop16	95	53.529	ENSECAG00000021354	NOP16	96	53.529	Equus_caballus
ENSPREG00000012940	nop16	95	61.404	ENSELUG00000000401	nop16	95	61.404	Esox_lucius
ENSPREG00000012940	nop16	95	53.529	ENSFCAG00000025473	-	96	53.529	Felis_catus
ENSPREG00000012940	nop16	99	51.685	ENSFALG00000008553	-	99	51.685	Ficedula_albicollis
ENSPREG00000012940	nop16	95	50.588	ENSFDAG00000000193	-	96	50.588	Fukomys_damarensis
ENSPREG00000012940	nop16	100	86.441	ENSFHEG00000016452	nop16	100	86.441	Fundulus_heteroclitus
ENSPREG00000012940	nop16	99	53.073	ENSGALG00000003355	-	99	53.073	Gallus_gallus
ENSPREG00000012940	nop16	89	88.535	ENSGAFG00000011616	nop16	80	93.103	Gambusia_affinis
ENSPREG00000012940	nop16	97	66.860	ENSGACG00000020819	-	100	66.860	Gasterosteus_aculeatus
ENSPREG00000012940	nop16	97	68.605	ENSGACG00000002618	-	100	68.605	Gasterosteus_aculeatus
ENSPREG00000012940	nop16	95	61.988	ENSGACG00000020810	nop16	100	61.988	Gasterosteus_aculeatus
ENSPREG00000012940	nop16	97	66.286	ENSGACG00000003122	-	100	70.085	Gasterosteus_aculeatus
ENSPREG00000012940	nop16	100	72.881	ENSHBUG00000013527	nop16	100	72.881	Haplochromis_burtoni
ENSPREG00000012940	nop16	97	51.744	ENSHGLG00000013437	NOP16	96	51.765	Heterocephalus_glaber_female
ENSPREG00000012940	nop16	97	51.744	ENSHGLG00100011375	NOP16	96	51.765	Heterocephalus_glaber_male
ENSPREG00000012940	nop16	97	68.605	ENSHCOG00000019999	nop16	98	68.605	Hippocampus_comes
ENSPREG00000012940	nop16	93	58.788	ENSIPUG00000006682	nop16	94	58.788	Ictalurus_punctatus
ENSPREG00000012940	nop16	95	52.907	ENSSTOG00000004869	-	96	52.907	Ictidomys_tridecemlineatus
ENSPREG00000012940	nop16	97	52.326	ENSJJAG00000017655	Nop16	97	51.744	Jaculus_jaculus
ENSPREG00000012940	nop16	100	75.706	ENSKMAG00000006164	nop16	100	75.706	Kryptolebias_marmoratus
ENSPREG00000012940	nop16	100	72.316	ENSLBEG00000018355	nop16	82	72.316	Labrus_bergylta
ENSPREG00000012940	nop16	55	69.072	ENSLBEG00000013819	-	67	69.072	Labrus_bergylta
ENSPREG00000012940	nop16	95	60.000	ENSLACG00000014884	nop16	96	60.000	Latimeria_chalumnae
ENSPREG00000012940	nop16	96	61.047	ENSLOCG00000012348	nop16	95	61.047	Lepisosteus_oculatus
ENSPREG00000012940	nop16	95	52.663	ENSLAFG00000017886	-	95	52.663	Loxodonta_africana
ENSPREG00000012940	nop16	99	71.023	ENSMAMG00000021868	nop16	99	71.023	Mastacembelus_armatus
ENSPREG00000012940	nop16	100	72.316	ENSMZEG00005012112	nop16	100	72.316	Maylandia_zebra
ENSPREG00000012940	nop16	51	63.736	ENSMGAG00000004726	-	88	63.736	Meleagris_gallopavo
ENSPREG00000012940	nop16	89	49.686	ENSMAUG00000015569	-	94	49.686	Mesocricetus_auratus
ENSPREG00000012940	nop16	51	61.111	ENSMAUG00000009852	-	84	61.111	Mesocricetus_auratus
ENSPREG00000012940	nop16	95	53.529	ENSMOCG00000020788	Nop16	96	53.529	Microtus_ochrogaster
ENSPREG00000012940	nop16	96	71.765	ENSMMOG00000016054	nop16	99	71.765	Mola_mola
ENSPREG00000012940	nop16	95	56.725	ENSMODG00000005214	-	96	56.725	Monodelphis_domestica
ENSPREG00000012940	nop16	100	78.531	ENSMALG00000021263	nop16	100	78.531	Monopterus_albus
ENSPREG00000012940	nop16	97	51.744	MGP_CAROLIEiJ_G0018538	Nop16	97	51.163	Mus_caroli
ENSPREG00000012940	nop16	97	52.326	ENSMUSG00000025869	Nop16	97	51.744	Mus_musculus
ENSPREG00000012940	nop16	95	52.941	MGP_PahariEiJ_G0019603	Nop16	96	52.941	Mus_pahari
ENSPREG00000012940	nop16	97	51.744	MGP_SPRETEiJ_G0019418	Nop16	97	51.163	Mus_spretus
ENSPREG00000012940	nop16	95	52.353	ENSMPUG00000012552	-	96	52.353	Mustela_putorius_furo
ENSPREG00000012940	nop16	95	51.765	ENSMPUG00000016964	-	95	51.765	Mustela_putorius_furo
ENSPREG00000012940	nop16	95	53.216	ENSMLUG00000003504	-	95	53.216	Myotis_lucifugus
ENSPREG00000012940	nop16	97	52.326	ENSNGAG00000018045	Nop16	96	52.353	Nannospalax_galili
ENSPREG00000012940	nop16	97	73.837	ENSNBRG00000015181	nop16	98	73.837	Neolamprologus_brichardi
ENSPREG00000012940	nop16	95	52.353	ENSODEG00000009586	-	96	52.353	Octodon_degus
ENSPREG00000012940	nop16	100	72.881	ENSONIG00000016417	nop16	100	72.881	Oreochromis_niloticus
ENSPREG00000012940	nop16	95	52.941	ENSOCUG00000013171	-	96	52.941	Oryctolagus_cuniculus
ENSPREG00000012940	nop16	100	68.362	ENSORLG00000026611	nop16	100	68.362	Oryzias_latipes
ENSPREG00000012940	nop16	99	70.286	ENSOMEG00000023001	nop16	99	70.286	Oryzias_melastigma
ENSPREG00000012940	nop16	95	53.529	ENSOGAG00000000824	-	96	53.529	Otolemur_garnettii
ENSPREG00000012940	nop16	95	54.118	ENSOARG00000002165	-	96	54.118	Ovis_aries
ENSPREG00000012940	nop16	95	52.353	ENSPPAG00000035473	-	96	52.353	Pan_paniscus
ENSPREG00000012940	nop16	95	53.529	ENSPPRG00000016600	-	96	53.529	Panthera_pardus
ENSPREG00000012940	nop16	95	53.529	ENSPTIG00000011708	-	96	53.529	Panthera_tigris_altaica
ENSPREG00000012940	nop16	95	52.353	ENSPTRG00000017560	NOP16	96	52.353	Pan_troglodytes
ENSPREG00000012940	nop16	99	57.955	ENSPKIG00000009587	nop16	99	57.955	Paramormyrops_kingsleyae
ENSPREG00000012940	nop16	79	58.219	ENSPSIG00000013546	-	99	58.219	Pelodiscus_sinensis
ENSPREG00000012940	nop16	95	76.023	ENSPMGG00000003443	nop16	99	76.023	Periophthalmus_magnuspinnatus
ENSPREG00000012940	nop16	95	52.353	ENSPEMG00000020268	Nop16	96	52.353	Peromyscus_maniculatus_bairdii
ENSPREG00000012940	nop16	95	53.488	ENSPCIG00000009782	-	96	53.488	Phascolarctos_cinereus
ENSPREG00000012940	nop16	100	97.175	ENSPFOG00000010549	nop16	100	97.175	Poecilia_formosa
ENSPREG00000012940	nop16	81	90.278	ENSPLAG00000007124	nop16	74	90.278	Poecilia_latipinna
ENSPREG00000012940	nop16	100	97.740	ENSPMEG00000008611	nop16	100	97.740	Poecilia_mexicana
ENSPREG00000012940	nop16	95	52.353	ENSPPYG00000016070	-	96	52.353	Pongo_abelii
ENSPREG00000012940	nop16	100	72.316	ENSPNYG00000013529	nop16	100	72.316	Pundamilia_nyererei
ENSPREG00000012940	nop16	93	56.364	ENSPNAG00000016233	nop16	95	56.364	Pygocentrus_nattereri
ENSPREG00000012940	nop16	95	52.353	ENSRNOG00000017284	Nop16	96	52.353	Rattus_norvegicus
ENSPREG00000012940	nop16	95	54.971	ENSSHAG00000001724	-	96	54.971	Sarcophilus_harrisii
ENSPREG00000012940	nop16	89	58.228	ENSSFOG00015010537	nop16	77	57.647	Scleropages_formosus
ENSPREG00000012940	nop16	100	77.401	ENSSDUG00000022349	nop16	100	77.401	Seriola_dumerili
ENSPREG00000012940	nop16	100	77.401	ENSSLDG00000025171	nop16	100	77.401	Seriola_lalandi_dorsalis
ENSPREG00000012940	nop16	73	43.846	ENSSARG00000006699	-	61	43.846	Sorex_araneus
ENSPREG00000012940	nop16	99	58.427	ENSSPUG00000006508	-	98	58.192	Sphenodon_punctatus
ENSPREG00000012940	nop16	100	76.836	ENSSPAG00000011772	nop16	100	76.836	Stegastes_partitus
ENSPREG00000012940	nop16	95	53.529	ENSSSCG00000029577	-	96	53.529	Sus_scrofa
ENSPREG00000012940	nop16	99	53.073	ENSTGUG00000000543	-	99	53.073	Taeniopygia_guttata
ENSPREG00000012940	nop16	99	68.750	ENSTRUG00000020255	nop16	99	68.750	Takifugu_rubripes
ENSPREG00000012940	nop16	97	70.349	ENSTNIG00000007616	nop16	97	70.349	Tetraodon_nigroviridis
ENSPREG00000012940	nop16	95	52.941	ENSUAMG00000005139	-	96	52.941	Ursus_americanus
ENSPREG00000012940	nop16	95	51.765	ENSVVUG00000001697	-	90	51.765	Vulpes_vulpes
ENSPREG00000012940	nop16	95	52.381	ENSXETG00000022342	nop16	98	52.381	Xenopus_tropicalis
ENSPREG00000012940	nop16	97	94.152	ENSXCOG00000018829	nop16	98	94.152	Xiphophorus_couchianus
ENSPREG00000012940	nop16	100	93.785	ENSXMAG00000029113	nop16	100	93.785	Xiphophorus_maculatus