EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000013017 (Gene tree)
Gene ID: -
Gene Symbol: snrpc
Alias: U1C|chunp6909|zgc:109792
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 4477 bases
Position: chrLG5:11826047-11830523
Accession: ZDB-GENE-020419-26
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000019263	zf-U1	PF06220.12	5.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000019469	-	543	-	ENSPREP00000019263	180 (aa)	-	-

Gene Model

Click here to download ENSPREG00000013017's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000013017's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000013017	snrpc	79	84.247	ENSAPOG00000013907	snrpc	99	84.247	Acanthochromis_polyacanthus
ENSPREG00000013017	snrpc	79	84.247	ENSAOCG00000021151	snrpc	99	84.247	Amphiprion_ocellaris
ENSPREG00000013017	snrpc	79	84.247	ENSAPEG00000023221	snrpc	99	84.247	Amphiprion_percula
ENSPREG00000013017	snrpc	79	84.247	ENSATEG00000025133	snrpc	99	84.247	Anabas_testudineus
ENSPREG00000013017	snrpc	79	57.962	ENSANAG00000021026	-	99	50.641	Aotus_nancymaae
ENSPREG00000013017	snrpc	79	48.408	ENSANAG00000021444	-	58	48.352	Aotus_nancymaae
ENSPREG00000013017	snrpc	79	58.491	ENSANAG00000007843	-	99	61.635	Aotus_nancymaae
ENSPREG00000013017	snrpc	79	56.875	ENSANAG00000019157	-	99	59.119	Aotus_nancymaae
ENSPREG00000013017	snrpc	79	54.375	ENSANAG00000019726	-	91	59.494	Aotus_nancymaae
ENSPREG00000013017	snrpc	68	81.600	ENSACLG00000000843	snrpc	99	79.592	Astatotilapia_calliptera
ENSPREG00000013017	snrpc	79	77.551	ENSAMXG00000032641	snrpc	99	75.342	Astyanax_mexicanus
ENSPREG00000013017	snrpc	79	57.233	ENSCJAG00000043055	-	58	62.766	Callithrix_jacchus
ENSPREG00000013017	snrpc	79	65.517	ENSTSYG00000025721	-	56	66.250	Carlito_syrichta
ENSPREG00000013017	snrpc	79	54.110	ENSCCAG00000028293	-	98	52.448	Cebus_capucinus
ENSPREG00000013017	snrpc	79	56.329	ENSCCAG00000022751	-	55	59.341	Cebus_capucinus
ENSPREG00000013017	snrpc	81	81.879	ENSCSEG00000016845	snrpc	99	81.208	Cynoglossus_semilaevis
ENSPREG00000013017	snrpc	79	85.517	ENSCVAG00000014297	snrpc	99	84.354	Cyprinodon_variegatus
ENSPREG00000013017	snrpc	79	62.264	ENSDARG00000009871	snrpc	99	68.553	Danio_rerio
ENSPREG00000013017	snrpc	55	58.586	ENSETEG00000008268	-	60	62.766	Echinops_telfairi
ENSPREG00000013017	snrpc	92	45.029	ENSEBUG00000011445	snrpc	56	41.346	Eptatretus_burgeri
ENSPREG00000013017	snrpc	79	67.500	ENSELUG00000020489	snrpc	99	52.532	Esox_lucius
ENSPREG00000013017	snrpc	79	60.256	ENSELUG00000000815	SNRPC	59	64.894	Esox_lucius
ENSPREG00000013017	snrpc	79	86.207	ENSGAFG00000016115	snrpc	99	85.034	Gambusia_affinis
ENSPREG00000013017	snrpc	79	84.932	ENSGACG00000004899	snrpc	100	83.893	Gasterosteus_aculeatus
ENSPREG00000013017	snrpc	68	81.600	ENSHBUG00000011637	snrpc	99	79.592	Haplochromis_burtoni
ENSPREG00000013017	snrpc	62	51.200	ENSHGLG00000005871	-	66	57.447	Heterocephalus_glaber_female
ENSPREG00000013017	snrpc	79	56.604	ENSHGLG00100017764	-	99	59.119	Heterocephalus_glaber_male
ENSPREG00000013017	snrpc	79	54.167	ENSIPUG00000024851	snrpc	99	67.296	Ictalurus_punctatus
ENSPREG00000013017	snrpc	79	84.247	ENSKMAG00000016356	snrpc	99	84.247	Kryptolebias_marmoratus
ENSPREG00000013017	snrpc	81	82.468	ENSLBEG00000023881	snrpc	99	77.551	Labrus_bergylta
ENSPREG00000013017	snrpc	79	57.233	ENSMMUG00000039415	-	99	60.377	Macaca_mulatta
ENSPREG00000013017	snrpc	78	50.318	ENSMLEG00000039724	-	81	45.752	Mandrillus_leucophaeus
ENSPREG00000013017	snrpc	79	84.247	ENSMAMG00000003857	snrpc	99	84.247	Mastacembelus_armatus
ENSPREG00000013017	snrpc	68	81.600	ENSMZEG00005002199	snrpc	99	79.592	Maylandia_zebra
ENSPREG00000013017	snrpc	79	80.420	ENSMMOG00000013149	snrpc	100	86.713	Mola_mola
ENSPREG00000013017	snrpc	79	82.192	ENSMALG00000001197	snrpc	99	71.918	Monopterus_albus
ENSPREG00000013017	snrpc	68	81.600	ENSONIG00000014757	snrpc	99	79.592	Oreochromis_niloticus
ENSPREG00000013017	snrpc	58	74.766	ENSORLG00000007308	snrpc	96	82.143	Oryzias_latipes
ENSPREG00000013017	snrpc	77	45.238	ENSOGAG00000028405	-	66	53.922	Otolemur_garnettii
ENSPREG00000013017	snrpc	79	57.143	ENSPPRG00000010967	-	58	53.933	Panthera_pardus
ENSPREG00000013017	snrpc	79	52.778	ENSPTIG00000011880	-	54	55.696	Panthera_tigris_altaica
ENSPREG00000013017	snrpc	79	53.939	ENSPKIG00000001671	SNRPC	58	62.366	Paramormyrops_kingsleyae
ENSPREG00000013017	snrpc	81	86.207	ENSPMGG00000022162	snrpc	100	77.241	Periophthalmus_magnuspinnatus
ENSPREG00000013017	snrpc	79	60.256	ENSPEMG00000002763	-	59	67.416	Peromyscus_maniculatus_bairdii
ENSPREG00000013017	snrpc	79	86.207	ENSPFOG00000015174	snrpc	99	85.034	Poecilia_formosa
ENSPREG00000013017	snrpc	79	86.207	ENSPLAG00000012311	snrpc	99	85.034	Poecilia_latipinna
ENSPREG00000013017	snrpc	79	86.207	ENSPMEG00000010274	snrpc	99	85.034	Poecilia_mexicana
ENSPREG00000013017	snrpc	67	65.289	ENSPNYG00000004900	snrpc	100	65.734	Pundamilia_nyererei
ENSPREG00000013017	snrpc	79	75.484	ENSPNAG00000012799	snrpc	99	73.377	Pygocentrus_nattereri
ENSPREG00000013017	snrpc	74	57.857	ENSSBOG00000032361	-	82	59.200	Saimiri_boliviensis_boliviensis
ENSPREG00000013017	snrpc	79	63.636	ENSSBOG00000032882	-	50	66.234	Saimiri_boliviensis_boliviensis
ENSPREG00000013017	snrpc	78	56.494	ENSSBOG00000023189	-	90	52.597	Saimiri_boliviensis_boliviensis
ENSPREG00000013017	snrpc	79	84.247	ENSSMAG00000008029	snrpc	99	84.247	Scophthalmus_maximus
ENSPREG00000013017	snrpc	79	84.247	ENSSDUG00000018895	snrpc	84	82.237	Seriola_dumerili
ENSPREG00000013017	snrpc	79	84.247	ENSSLDG00000005034	snrpc	99	84.247	Seriola_lalandi_dorsalis
ENSPREG00000013017	snrpc	79	84.247	ENSSPAG00000000914	snrpc	99	84.247	Stegastes_partitus
ENSPREG00000013017	snrpc	79	72.414	ENSTRUG00000021651	snrpc	99	72.603	Takifugu_rubripes
ENSPREG00000013017	snrpc	79	71.069	ENSTNIG00000018307	snrpc	99	70.440	Tetraodon_nigroviridis
ENSPREG00000013017	snrpc	71	59.859	ENSTBEG00000016759	-	79	54.930	Tupaia_belangeri
ENSPREG00000013017	snrpc	78	65.584	ENSVVUG00000010467	-	95	56.571	Vulpes_vulpes
ENSPREG00000013017	snrpc	79	67.606	ENSXCOG00000015871	-	100	73.239	Xiphophorus_couchianus
ENSPREG00000013017	snrpc	79	86.207	ENSXMAG00000017935	snrpc	99	85.034	Xiphophorus_maculatus