EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPREG00000013036 (Gene tree)
Gene ID
103469439
Gene Symbol
-
Alias
-
Full Name
splicing factor U2AF 65 kDa subunit-like
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Minus strand
Length
13618 bases
Position
chrLG8:27866792-27880409
Accession
103469439
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000019318RRM_1PF00076.224.9e-3513
ENSPREP00000019318RRM_1PF00076.224.9e-3523
ENSPREP00000019318RRM_1PF00076.224.9e-3533
ENSPREP00000019277RRM_1PF00076.223.3e-0711
ENSPREP00000019357RRM_1PF00076.221.6e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000019524-3776XM_008417118ENSPREP00000019318508 (aa)XP_008415340UPI0004A40AC1
ENSPRET00000019483-5342-ENSPREP00000019277245 (aa)--
ENSPRET00000019563-3394-ENSPREP00000019357146 (aa)--
Gene Model
Click here to download ENSPREG00000013036's gene model file
Pathways
Pathway IDPathway NameSource
pret03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000013036's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPREG00000013036-10075.000ENSPREG00000008739u2af2a9974.414
ENSPREG00000013036-6837.255ENSPREG00000005440puf60b5637.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000013036-10075.676ENSG00000063244U2AF29983.007Homo_sapiens
ENSPREG00000013036-10075.000ENSAPOG00000023155u2af2a9977.640Acanthochromis_polyacanthus
ENSPREG00000013036-10096.575ENSAPOG00000002208-10096.567Acanthochromis_polyacanthus
ENSPREG00000013036-7179.006ENSAMEG00000003864U2AF28779.832Ailuropoda_melanoleuca
ENSPREG00000013036-10095.890ENSACIG00000014173-9694.170Amphilophus_citrinellus
ENSPREG00000013036-10074.324ENSACIG00000005749u2af2a9280.303Amphilophus_citrinellus
ENSPREG00000013036-10075.000ENSAOCG00000015571u2af2a10074.414Amphiprion_ocellaris
ENSPREG00000013036-10097.260ENSAOCG00000003595-10096.996Amphiprion_ocellaris
ENSPREG00000013036-10075.000ENSAPEG00000009376u2af2a9380.556Amphiprion_percula
ENSPREG00000013036-10095.205ENSAPEG00000020062-9495.652Amphiprion_percula
ENSPREG00000013036-10075.000ENSATEG00000022332u2af2a9973.774Anabas_testudineus
ENSPREG00000013036-10096.575ENSATEG00000020577-9996.667Anabas_testudineus
ENSPREG00000013036-10074.172ENSACAG00000015489U2AF29974.153Anolis_carolinensis
ENSPREG00000013036-9269.972ENSANAG00000028042U2AF29973.003Aotus_nancymaae
ENSPREG00000013036-10074.324ENSACLG00000022181u2af2a9974.200Astatotilapia_calliptera
ENSPREG00000013036-10096.575ENSACLG00000020793-10096.781Astatotilapia_calliptera
ENSPREG00000013036-10073.826ENSAMXG00000039454u2af2b9972.068Astyanax_mexicanus
ENSPREG00000013036-10072.848ENSAMXG00000033347u2af2a9970.921Astyanax_mexicanus
ENSPREG00000013036-10075.676ENSBTAG00000002830U2AF29974.895Bos_taurus
ENSPREG00000013036-10055.479WBGene00006697uaf-110055.479Caenorhabditis_elegans
ENSPREG00000013036-10074.342ENSCJAG00000017128U2AF29974.473Callithrix_jacchus
ENSPREG00000013036-10075.676ENSCAFG00000002551U2AF29974.894Canis_familiaris
ENSPREG00000013036-10074.342ENSCAFG00020015445U2AF28380.905Canis_lupus_dingo
ENSPREG00000013036-10075.658ENSCHIG00000023595U2AF28768.329Capra_hircus
ENSPREG00000013036-10074.342ENSTSYG00000007432U2AF29974.473Carlito_syrichta
ENSPREG00000013036-10075.658ENSCAPG00000008466U2AF28880.645Cavia_aperea
ENSPREG00000013036-10075.658ENSCPOG00000001582U2AF29974.895Cavia_porcellus
ENSPREG00000013036-10074.342ENSCCAG00000023336U2AF29974.473Cebus_capucinus
ENSPREG00000013036-10075.676ENSCATG00000004637U2AF29974.894Cercocebus_atys
ENSPREG00000013036-10075.676ENSCLAG00000000596U2AF29974.894Chinchilla_lanigera
ENSPREG00000013036-10075.676ENSCSAG00000001722U2AF29974.894Chlorocebus_sabaeus
ENSPREG00000013036-10075.676ENSCPBG00000004485U2AF29983.007Chrysemys_picta_bellii
ENSPREG00000013036-10061.905ENSCING00000003455-8369.000Ciona_intestinalis
ENSPREG00000013036-10061.905ENSCSAVG00000006813-8767.500Ciona_savignyi
ENSPREG00000013036-8371.729ENSCANG00000031002-9674.299Colobus_angolensis_palliatus
ENSPREG00000013036-10069.536ENSCANG00000043845-9970.551Colobus_angolensis_palliatus
ENSPREG00000013036-10075.676ENSCGRG00001003185-9974.473Cricetulus_griseus_chok1gshd
ENSPREG00000013036-10070.270ENSCGRG00001007486-9969.231Cricetulus_griseus_chok1gshd
ENSPREG00000013036-7173.585ENSCGRG00000004524-7979.098Cricetulus_griseus_crigri
ENSPREG00000013036-10070.270ENSCGRG00000018587-9969.231Cricetulus_griseus_crigri
ENSPREG00000013036-7093.137ENSCSEG00000006604-10093.137Cynoglossus_semilaevis
ENSPREG00000013036-10091.096ENSCSEG00000020504-9489.700Cynoglossus_semilaevis
ENSPREG00000013036-10074.324ENSCSEG00000018709u2af2a8275.000Cynoglossus_semilaevis
ENSPREG00000013036-10096.575ENSCVAG00000023307-10096.781Cyprinodon_variegatus
ENSPREG00000013036-10075.000ENSCVAG00000001259u2af2a9974.414Cyprinodon_variegatus
ENSPREG00000013036-10071.141ENSDARG00000012505u2af2a9972.766Danio_rerio
ENSPREG00000013036-10073.154ENSDARG00000011740u2af2b9973.053Danio_rerio
ENSPREG00000013036-8371.729ENSDNOG00000047039U2AF29674.299Dasypus_novemcinctus
ENSPREG00000013036-10074.342ENSDORG00000003250U2af29974.473Dipodomys_ordii
ENSPREG00000013036-9756.028FBgn0034834LS28553.924Drosophila_melanogaster
ENSPREG00000013036-10071.918FBgn0005411U2af5010072.011Drosophila_melanogaster
ENSPREG00000013036-10067.114ENSEBUG00000006012-10067.114Eptatretus_burgeri
ENSPREG00000013036-10069.799ENSEBUG00000010917U2AF28873.500Eptatretus_burgeri
ENSPREG00000013036-10067.114ENSEBUG00000001732U2AF28764.051Eptatretus_burgeri
ENSPREG00000013036-10074.342ENSEASG00005020708U2AF27880.856Equus_asinus_asinus
ENSPREG00000013036-10075.676ENSECAG00000010110U2AF29973.987Equus_caballus
ENSPREG00000013036-10090.411ENSELUG00000018459-10090.987Esox_lucius
ENSPREG00000013036-10073.154ENSELUG00000022291u2af2b9971.097Esox_lucius
ENSPREG00000013036-10074.497ENSELUG00000015850u2af2a9972.594Esox_lucius
ENSPREG00000013036-10074.342ENSFCAG00000011504U2AF29974.473Felis_catus
ENSPREG00000013036-10075.658ENSFDAG00000011264U2AF28580.645Fukomys_damarensis
ENSPREG00000013036-10075.000ENSFHEG00000016025u2af2a9973.504Fundulus_heteroclitus
ENSPREG00000013036-10097.945ENSFHEG00000015338-10097.945Fundulus_heteroclitus
ENSPREG00000013036-10074.497ENSGMOG00000004535u2af2a9972.669Gadus_morhua
ENSPREG00000013036-9574.286ENSGALG00000052748U2AF26573.970Gallus_gallus
ENSPREG00000013036-10097.945ENSGAFG00000005628-10096.996Gambusia_affinis
ENSPREG00000013036-10075.000ENSGAFG00000013626u2af2a8874.414Gambusia_affinis
ENSPREG00000013036-10075.000ENSGACG00000010632U2AF29973.774Gasterosteus_aculeatus
ENSPREG00000013036-10089.933ENSGACG00000014500-10084.742Gasterosteus_aculeatus
ENSPREG00000013036-10075.676ENSGAGG00000011849U2AF29983.007Gopherus_agassizii
ENSPREG00000013036-10075.676ENSGGOG00000036399-9673.438Gorilla_gorilla
ENSPREG00000013036-10096.575ENSHBUG00000017424-10096.781Haplochromis_burtoni
ENSPREG00000013036-10074.324ENSHBUG00000013935u2af2a9974.200Haplochromis_burtoni
ENSPREG00000013036-10074.342ENSHGLG00000005889U2AF29974.473Heterocephalus_glaber_female
ENSPREG00000013036-10074.342ENSHGLG00100004757U2AF28880.149Heterocephalus_glaber_male
ENSPREG00000013036-10079.054ENSHCOG00000007327-10079.054Hippocampus_comes
ENSPREG00000013036-10075.000ENSHCOG00000019367u2af2a9973.109Hippocampus_comes
ENSPREG00000013036-10071.141ENSIPUG00000007717u2af2a9971.064Ictalurus_punctatus
ENSPREG00000013036-10088.356ENSIPUG00000009844-10085.837Ictalurus_punctatus
ENSPREG00000013036-10075.168ENSIPUG00000009077u2af29972.495Ictalurus_punctatus
ENSPREG00000013036-10074.342ENSSTOG00000019595U2AF29974.473Ictidomys_tridecemlineatus
ENSPREG00000013036-10074.342ENSJJAG00000017705U2af29974.473Jaculus_jaculus
ENSPREG00000013036-10075.000ENSKMAG00000005960u2af2a9973.774Kryptolebias_marmoratus
ENSPREG00000013036-10096.575ENSKMAG00000006095-10096.575Kryptolebias_marmoratus
ENSPREG00000013036-10095.205ENSLBEG00000005001-9692.825Labrus_bergylta
ENSPREG00000013036-10075.676ENSLBEG00000016162u2af2a9974.414Labrus_bergylta
ENSPREG00000013036-10095.205ENSLBEG00000010685-10095.205Labrus_bergylta
ENSPREG00000013036-10076.351ENSLACG00000001648U2AF29981.967Latimeria_chalumnae
ENSPREG00000013036-10091.781ENSLOCG00000010843-10090.343Lepisosteus_oculatus
ENSPREG00000013036-5481.884ENSLOCG00000008050u2af2b8180.634Lepisosteus_oculatus
ENSPREG00000013036-10070.270ENSLAFG00000028496-8374.745Loxodonta_africana
ENSPREG00000013036-10075.676ENSLAFG00000018056-9974.894Loxodonta_africana
ENSPREG00000013036-10074.342ENSMFAG00000038383U2AF29974.473Macaca_fascicularis
ENSPREG00000013036-10073.684ENSMMUG00000004810U2AF29974.262Macaca_mulatta
ENSPREG00000013036-10075.676ENSMNEG00000042096U2AF29974.894Macaca_nemestrina
ENSPREG00000013036-10075.676ENSMLEG00000032219U2AF27880.702Mandrillus_leucophaeus
ENSPREG00000013036-10096.575ENSMAMG00000020158-10094.635Mastacembelus_armatus
ENSPREG00000013036-10075.000ENSMAMG00000019817u2af2a9973.263Mastacembelus_armatus
ENSPREG00000013036-10074.324ENSMZEG00005016563u2af2a9974.200Maylandia_zebra
ENSPREG00000013036-10096.575ENSMZEG00005023318-10096.781Maylandia_zebra
ENSPREG00000013036-10074.342ENSMAUG00000008180U2af28680.149Mesocricetus_auratus
ENSPREG00000013036-10075.676ENSMICG00000027681U2AF29974.894Microcebus_murinus
ENSPREG00000013036-10074.342ENSMOCG00000013214-9974.473Microtus_ochrogaster
ENSPREG00000013036-10072.973ENSMOCG00000001018-9980.065Microtus_ochrogaster
ENSPREG00000013036-10070.946ENSMOCG00000007227-8475.255Microtus_ochrogaster
ENSPREG00000013036-10075.000ENSMMOG00000016600u2af2a9180.556Mola_mola
ENSPREG00000013036-10088.356ENSMMOG00000000531-8787.192Mola_mola
ENSPREG00000013036-10097.945ENSMALG00000019795-10097.945Monopterus_albus
ENSPREG00000013036-10075.676ENSMALG00000009985u2af2a9973.830Monopterus_albus
ENSPREG00000013036-10075.676MGP_CAROLIEiJ_G0029150U2af29974.894Mus_caroli
ENSPREG00000013036-10075.676ENSMUSG00000030435U2af29983.007Mus_musculus
ENSPREG00000013036-10075.676MGP_PahariEiJ_G0021017U2af29974.894Mus_pahari
ENSPREG00000013036-10075.676MGP_SPRETEiJ_G0030203U2af29974.894Mus_spretus
ENSPREG00000013036-10075.676ENSMPUG00000007135U2AF29974.894Mustela_putorius_furo
ENSPREG00000013036-10074.342ENSMLUG00000011051-9978.333Myotis_lucifugus
ENSPREG00000013036-10074.342ENSNGAG00000020369U2af29974.473Nannospalax_galili
ENSPREG00000013036-10074.324ENSNBRG00000002568u2af2a9974.200Neolamprologus_brichardi
ENSPREG00000013036-10096.575ENSNBRG00000011100-9994.771Neolamprologus_brichardi
ENSPREG00000013036-10075.676ENSNLEG00000010562U2AF29983.007Nomascus_leucogenys
ENSPREG00000013036-10072.973ENSMEUG00000002346U2AF28669.821Notamacropus_eugenii
ENSPREG00000013036-9764.336ENSODEG00000009254-9159.850Octodon_degus
ENSPREG00000013036-10074.342ENSODEG00000012729-9969.409Octodon_degus
ENSPREG00000013036-10074.324ENSONIG00000012793u2af2a9972.881Oreochromis_niloticus
ENSPREG00000013036-10096.575ENSONIG00000009682-10096.781Oreochromis_niloticus
ENSPREG00000013036-10075.676ENSORLG00000011545u2af2a9973.561Oryzias_latipes
ENSPREG00000013036-10075.676ENSORLG00020006941u2af2a9973.561Oryzias_latipes_hni
ENSPREG00000013036-10075.676ENSORLG00015012843u2af2a9973.561Oryzias_latipes_hsok
ENSPREG00000013036-10075.676ENSOMEG00000011386u2af2a9974.840Oryzias_melastigma
ENSPREG00000013036-10074.342ENSOGAG00000007206-9974.473Otolemur_garnettii
ENSPREG00000013036-9061.481ENSOGAG00000034729-6566.316Otolemur_garnettii
ENSPREG00000013036-9268.815ENSOARG00000001091U2AF29969.053Ovis_aries
ENSPREG00000013036-10074.342ENSPPAG00000039782U2AF29974.473Pan_paniscus
ENSPREG00000013036-10074.342ENSPPRG00000013843U2AF29974.473Panthera_pardus
ENSPREG00000013036-9169.017ENSPTIG00000005489U2AF28775.743Panthera_tigris_altaica
ENSPREG00000013036-10075.676ENSPTRG00000011523U2AF29983.007Pan_troglodytes
ENSPREG00000013036-10075.676ENSPANG00000008459U2AF29974.894Papio_anubis
ENSPREG00000013036-10074.497ENSPKIG00000024346u2af2b9279.699Paramormyrops_kingsleyae
ENSPREG00000013036-10092.466ENSPKIG00000014878-10089.485Paramormyrops_kingsleyae
ENSPREG00000013036-10061.635ENSPSIG00000008014U2AF28760.880Pelodiscus_sinensis
ENSPREG00000013036-10074.324ENSPMGG00000022980u2af2a9073.645Periophthalmus_magnuspinnatus
ENSPREG00000013036-10075.676ENSPEMG00000007378U2af29983.007Peromyscus_maniculatus_bairdii
ENSPREG00000013036-10077.027ENSPMAG00000004097u2af2a8878.465Petromyzon_marinus
ENSPREG00000013036-10075.658ENSPCIG00000018013U2AF29974.895Phascolarctos_cinereus
ENSPREG00000013036-10099.315ENSPFOG00000006433-10097.639Poecilia_formosa
ENSPREG00000013036-10075.000ENSPFOG00000010799u2af2a10074.414Poecilia_formosa
ENSPREG00000013036-10098.630ENSPLAG00000003275-9897.556Poecilia_latipinna
ENSPREG00000013036-10075.000ENSPLAG00000014365u2af2a9974.414Poecilia_latipinna
ENSPREG00000013036-10075.000ENSPMEG00000002969u2af2a9974.414Poecilia_mexicana
ENSPREG00000013036-10099.315ENSPMEG00000003734-9897.111Poecilia_mexicana
ENSPREG00000013036-7471.053ENSPPYG00000010429-7781.752Pongo_abelii
ENSPREG00000013036-9258.526ENSPCAG00000014399-9960.842Procavia_capensis
ENSPREG00000013036-10069.595ENSPCAG00000003709-9671.939Procavia_capensis
ENSPREG00000013036-10074.342ENSPCOG00000025870U2AF29974.473Propithecus_coquereli
ENSPREG00000013036-10073.684ENSPVAG00000004540U2AF29974.262Pteropus_vampyrus
ENSPREG00000013036-10074.324ENSPNYG00000001438u2af2a9974.200Pundamilia_nyererei
ENSPREG00000013036-10096.575ENSPNYG00000011605-10096.781Pundamilia_nyererei
ENSPREG00000013036-10073.154ENSPNAG00000017620u2af2a9972.766Pygocentrus_nattereri
ENSPREG00000013036-10075.168ENSPNAG00000027289u2af2b9972.281Pygocentrus_nattereri
ENSPREG00000013036-10093.836ENSPNAG00000007182-10093.133Pygocentrus_nattereri
ENSPREG00000013036-10075.676ENSRNOG00000015914U2af29974.894Rattus_norvegicus
ENSPREG00000013036-10074.342ENSRBIG00000041018U2AF29974.262Rhinopithecus_bieti
ENSPREG00000013036-7275.969ENSRROG00000031103-8780.278Rhinopithecus_roxellana
ENSPREG00000013036-10074.324ENSRROG00000031238-9970.638Rhinopithecus_roxellana
ENSPREG00000013036-10075.676ENSSBOG00000023891U2AF29974.894Saimiri_boliviensis_boliviensis
ENSPREG00000013036-10075.168ENSSFOG00015019182u2af2b8981.061Scleropages_formosus
ENSPREG00000013036-10092.466ENSSFOG00015003884-10090.129Scleropages_formosus
ENSPREG00000013036-10095.890ENSSMAG00000013779-10095.279Scophthalmus_maximus
ENSPREG00000013036-10075.000ENSSMAG00000012582u2af2a9973.504Scophthalmus_maximus
ENSPREG00000013036-10097.260ENSSDUG00000021434-9494.794Seriola_dumerili
ENSPREG00000013036-10075.000ENSSDUG00000009457u2af2a10074.414Seriola_dumerili
ENSPREG00000013036-10075.000ENSSLDG00000022742u2af2a9974.414Seriola_lalandi_dorsalis
ENSPREG00000013036-10097.260ENSSLDG00000016151-9994.794Seriola_lalandi_dorsalis
ENSPREG00000013036-10075.676ENSSPUG00000010229U2AF29972.746Sphenodon_punctatus
ENSPREG00000013036-10097.260ENSSPAG00000005241-10096.781Stegastes_partitus
ENSPREG00000013036-10075.000ENSSPAG00000022519u2af2a9974.414Stegastes_partitus
ENSPREG00000013036-10075.676ENSSSCG00000034815U2AF29974.894Sus_scrofa
ENSPREG00000013036-10092.466ENSTRUG00000006885-10092.466Takifugu_rubripes
ENSPREG00000013036-10069.595ENSTRUG00000005514u2af2a8878.535Takifugu_rubripes
ENSPREG00000013036-10091.096ENSTNIG00000011257-10088.034Tetraodon_nigroviridis
ENSPREG00000013036-10074.324ENSTNIG00000008106U2AF29974.145Tetraodon_nigroviridis
ENSPREG00000013036-7177.135ENSTBEG00000009104U2AF29877.933Tupaia_belangeri
ENSPREG00000013036-10074.342ENSTTRG00000000987U2AF29974.473Tursiops_truncatus
ENSPREG00000013036-10074.342ENSUAMG00000019883U2AF28780.856Ursus_americanus
ENSPREG00000013036-10075.676ENSUMAG00000024586U2AF29983.007Ursus_maritimus
ENSPREG00000013036-10075.676ENSVVUG00000006956U2AF26080.451Vulpes_vulpes
ENSPREG00000013036-10076.351ENSXETG00000019128u2af29972.803Xenopus_tropicalis
ENSPREG00000013036-10075.000ENSXCOG00000019406u2af2a9080.556Xiphophorus_couchianus
ENSPREG00000013036-10075.000ENSXMAG00000011979u2af2a9974.414Xiphophorus_maculatus
ENSPREG00000013036-10097.945ENSXMAG00000000768-10097.546Xiphophorus_maculatus

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