EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000013090 (Gene tree)
Gene ID: 103469056
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 9949 bases
Position: chrLG8:20349595-20359543
Accession: 103469056
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000019359	tRNA_int_end_N2	PF12928.7	9.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000019566	-	3974	XM_008416542	ENSPREP00000019359	494 (aa)	XP_008414764	UPI0004A49232

Gene Model

Click here to download ENSPREG00000013090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000013090's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000013090	tsen54	99	45.763	ENSG00000182173	TSEN54	100	65.278	Homo_sapiens
ENSPREG00000013090	tsen54	100	71.709	ENSAPOG00000009659	tsen54	100	70.244	Acanthochromis_polyacanthus
ENSPREG00000013090	tsen54	95	46.457	ENSAMEG00000009414	TSEN54	96	46.078	Ailuropoda_melanoleuca
ENSPREG00000013090	tsen54	100	71.120	ENSAOCG00000000152	tsen54	98	71.120	Amphiprion_ocellaris
ENSPREG00000013090	tsen54	100	71.120	ENSAPEG00000018931	tsen54	98	71.120	Amphiprion_percula
ENSPREG00000013090	tsen54	100	66.792	ENSATEG00000019860	tsen54	100	67.358	Anabas_testudineus
ENSPREG00000013090	tsen54	85	46.374	ENSAPLG00000009419	TSEN54	99	46.154	Anas_platyrhynchos
ENSPREG00000013090	tsen54	99	46.654	ENSACAG00000006714	TSEN54	99	46.845	Anolis_carolinensis
ENSPREG00000013090	tsen54	96	46.602	ENSANAG00000024061	TSEN54	98	46.476	Aotus_nancymaae
ENSPREG00000013090	tsen54	100	68.906	ENSACLG00000019800	tsen54	100	68.906	Astatotilapia_calliptera
ENSPREG00000013090	tsen54	97	57.863	ENSAMXG00000006546	tsen54	97	58.266	Astyanax_mexicanus
ENSPREG00000013090	tsen54	98	47.529	ENSBTAG00000000824	TSEN54	99	47.148	Bos_taurus
ENSPREG00000013090	tsen54	96	45.631	ENSCJAG00000014278	TSEN54	98	45.905	Callithrix_jacchus
ENSPREG00000013090	tsen54	99	46.314	ENSCAFG00000004798	TSEN54	99	46.516	Canis_familiaris
ENSPREG00000013090	tsen54	99	46.314	ENSCAFG00020000312	TSEN54	99	46.516	Canis_lupus_dingo
ENSPREG00000013090	tsen54	98	46.743	ENSCHIG00000019908	TSEN54	99	47.674	Capra_hircus
ENSPREG00000013090	tsen54	85	44.737	ENSTSYG00000037439	TSEN54	99	45.690	Carlito_syrichta
ENSPREG00000013090	tsen54	96	46.214	ENSCCAG00000036624	TSEN54	98	46.095	Cebus_capucinus
ENSPREG00000013090	tsen54	96	46.408	ENSCATG00000042877	TSEN54	98	46.110	Cercocebus_atys
ENSPREG00000013090	tsen54	96	48.062	ENSCLAG00000002924	TSEN54	98	46.958	Chinchilla_lanigera
ENSPREG00000013090	tsen54	99	45.574	ENSCSAG00000004809	TSEN54	99	46.328	Chlorocebus_sabaeus
ENSPREG00000013090	tsen54	97	48.062	ENSCPBG00000028071	TSEN54	98	47.481	Chrysemys_picta_bellii
ENSPREG00000013090	tsen54	99	45.198	ENSCANG00000028053	TSEN54	99	45.403	Colobus_angolensis_palliatus
ENSPREG00000013090	tsen54	99	46.442	ENSCGRG00001020029	Tsen54	99	46.067	Cricetulus_griseus_chok1gshd
ENSPREG00000013090	tsen54	83	45.133	ENSCGRG00000016289	Tsen54	99	44.690	Cricetulus_griseus_crigri
ENSPREG00000013090	tsen54	80	56.039	ENSCSEG00000020586	tsen54	99	56.039	Cynoglossus_semilaevis
ENSPREG00000013090	tsen54	80	58.313	ENSDARG00000036844	tsen54	100	58.911	Danio_rerio
ENSPREG00000013090	tsen54	99	44.860	ENSDNOG00000018452	TSEN54	99	45.660	Dasypus_novemcinctus
ENSPREG00000013090	tsen54	99	46.578	ENSDORG00000004073	Tsen54	99	46.476	Dipodomys_ordii
ENSPREG00000013090	tsen54	95	32.950	ENSEBUG00000005203	TSEN54	94	32.950	Eptatretus_burgeri
ENSPREG00000013090	tsen54	98	47.719	ENSEASG00005000579	TSEN54	98	47.338	Equus_asinus_asinus
ENSPREG00000013090	tsen54	98	47.148	ENSECAG00000004924	TSEN54	98	46.768	Equus_caballus
ENSPREG00000013090	tsen54	85	44.105	ENSEEUG00000008467	TSEN54	99	44.783	Erinaceus_europaeus
ENSPREG00000013090	tsen54	99	57.353	ENSELUG00000017703	tsen54	92	57.537	Esox_lucius
ENSPREG00000013090	tsen54	98	46.578	ENSFCAG00000023712	TSEN54	99	47.148	Felis_catus
ENSPREG00000013090	tsen54	93	48.057	ENSFALG00000001119	TSEN54	92	47.444	Ficedula_albicollis
ENSPREG00000013090	tsen54	85	47.253	ENSFDAG00000019090	TSEN54	99	47.253	Fukomys_damarensis
ENSPREG00000013090	tsen54	100	80.952	ENSFHEG00000005470	tsen54	100	80.952	Fundulus_heteroclitus
ENSPREG00000013090	tsen54	83	61.749	ENSGMOG00000013146	tsen54	97	61.749	Gadus_morhua
ENSPREG00000013090	tsen54	96	43.725	ENSGALG00000047163	TSEN54	99	43.529	Gallus_gallus
ENSPREG00000013090	tsen54	100	91.532	ENSGAFG00000005111	tsen54	100	91.532	Gambusia_affinis
ENSPREG00000013090	tsen54	96	64.959	ENSGACG00000014987	tsen54	100	64.754	Gasterosteus_aculeatus
ENSPREG00000013090	tsen54	99	47.575	ENSGAGG00000006825	TSEN54	98	47.818	Gopherus_agassizii
ENSPREG00000013090	tsen54	95	46.275	ENSGGOG00000009417	TSEN54	99	47.059	Gorilla_gorilla
ENSPREG00000013090	tsen54	90	67.941	ENSHBUG00000018296	tsen54	92	67.941	Haplochromis_burtoni
ENSPREG00000013090	tsen54	99	47.092	ENSHGLG00000007979	TSEN54	99	46.717	Heterocephalus_glaber_female
ENSPREG00000013090	tsen54	99	46.154	ENSHGLG00100005497	TSEN54	99	45.779	Heterocephalus_glaber_male
ENSPREG00000013090	tsen54	80	65.441	ENSHCOG00000007481	tsen54	100	65.931	Hippocampus_comes
ENSPREG00000013090	tsen54	99	52.390	ENSIPUG00000000590	tsen54	99	52.390	Ictalurus_punctatus
ENSPREG00000013090	tsen54	96	46.214	ENSSTOG00000012883	TSEN54	97	46.214	Ictidomys_tridecemlineatus
ENSPREG00000013090	tsen54	99	46.542	ENSJJAG00000007365	Tsen54	99	46.355	Jaculus_jaculus
ENSPREG00000013090	tsen54	100	70.455	ENSKMAG00000006944	tsen54	100	70.265	Kryptolebias_marmoratus
ENSPREG00000013090	tsen54	100	65.577	ENSLBEG00000004199	tsen54	100	65.577	Labrus_bergylta
ENSPREG00000013090	tsen54	96	42.636	ENSLACG00000009497	TSEN54	99	42.636	Latimeria_chalumnae
ENSPREG00000013090	tsen54	97	55.556	ENSLOCG00000011191	tsen54	97	55.361	Lepisosteus_oculatus
ENSPREG00000013090	tsen54	92	45.380	ENSLAFG00000011655	TSEN54	92	46.598	Loxodonta_africana
ENSPREG00000013090	tsen54	99	45.574	ENSMFAG00000000712	TSEN54	99	46.328	Macaca_fascicularis
ENSPREG00000013090	tsen54	99	45.574	ENSMNEG00000029199	TSEN54	99	46.328	Macaca_nemestrina
ENSPREG00000013090	tsen54	85	44.639	ENSMLEG00000044168	TSEN54	88	45.514	Mandrillus_leucophaeus
ENSPREG00000013090	tsen54	100	69.412	ENSMAMG00000019773	tsen54	100	70.000	Mastacembelus_armatus
ENSPREG00000013090	tsen54	100	68.714	ENSMZEG00005000884	tsen54	100	68.714	Maylandia_zebra
ENSPREG00000013090	tsen54	92	43.320	ENSMGAG00000009556	TSEN54	92	44.242	Meleagris_gallopavo
ENSPREG00000013090	tsen54	99	47.556	ENSMAUG00000016838	Tsen54	99	47.180	Mesocricetus_auratus
ENSPREG00000013090	tsen54	99	48.362	ENSMICG00000044012	TSEN54	99	48.362	Microcebus_murinus
ENSPREG00000013090	tsen54	99	47.529	ENSMOCG00000021585	Tsen54	99	46.958	Microtus_ochrogaster
ENSPREG00000013090	tsen54	96	63.711	ENSMMOG00000020189	tsen54	99	64.948	Mola_mola
ENSPREG00000013090	tsen54	96	45.298	ENSMODG00000007438	TSEN54	97	44.821	Monodelphis_domestica
ENSPREG00000013090	tsen54	99	68.714	ENSMALG00000020573	tsen54	99	68.846	Monopterus_albus
ENSPREG00000013090	tsen54	99	45.574	MGP_CAROLIEiJ_G0017417	Tsen54	99	45.198	Mus_caroli
ENSPREG00000013090	tsen54	99	45.966	ENSMUSG00000020781	Tsen54	99	45.591	Mus_musculus
ENSPREG00000013090	tsen54	99	45.951	MGP_PahariEiJ_G0018547	Tsen54	99	45.574	Mus_pahari
ENSPREG00000013090	tsen54	99	45.966	MGP_SPRETEiJ_G0018262	Tsen54	99	45.591	Mus_spretus
ENSPREG00000013090	tsen54	99	43.925	ENSMPUG00000013870	TSEN54	99	44.981	Mustela_putorius_furo
ENSPREG00000013090	tsen54	98	46.850	ENSMLUG00000015298	TSEN54	98	47.047	Myotis_lucifugus
ENSPREG00000013090	tsen54	99	45.660	ENSNGAG00000015673	Tsen54	99	45.094	Nannospalax_galili
ENSPREG00000013090	tsen54	88	40.987	ENSMEUG00000011908	TSEN54	99	40.987	Notamacropus_eugenii
ENSPREG00000013090	tsen54	99	43.217	ENSOPRG00000012513	TSEN54	99	43.023	Ochotona_princeps
ENSPREG00000013090	tsen54	100	68.199	ENSONIG00000009543	tsen54	100	68.199	Oreochromis_niloticus
ENSPREG00000013090	tsen54	98	43.643	ENSOCUG00000009875	TSEN54	98	44.007	Oryctolagus_cuniculus
ENSPREG00000013090	tsen54	100	66.333	ENSORLG00000000852	tsen54	100	66.197	Oryzias_latipes
ENSPREG00000013090	tsen54	100	66.533	ENSORLG00020018221	tsen54	100	66.398	Oryzias_latipes_hni
ENSPREG00000013090	tsen54	98	67.280	ENSORLG00015009413	tsen54	99	67.146	Oryzias_latipes_hsok
ENSPREG00000013090	tsen54	100	67.807	ENSOMEG00000014402	tsen54	97	67.807	Oryzias_melastigma
ENSPREG00000013090	tsen54	99	45.541	ENSOGAG00000001442	TSEN54	99	45.161	Otolemur_garnettii
ENSPREG00000013090	tsen54	85	43.860	ENSOARG00000010361	TSEN54	99	44.737	Ovis_aries
ENSPREG00000013090	tsen54	94	46.108	ENSPPAG00000043519	TSEN54	99	47.222	Pan_paniscus
ENSPREG00000013090	tsen54	98	46.768	ENSPPRG00000009162	TSEN54	99	47.338	Panthera_pardus
ENSPREG00000013090	tsen54	85	45.333	ENSPTIG00000019312	TSEN54	96	45.575	Panthera_tigris_altaica
ENSPREG00000013090	tsen54	99	45.574	ENSPTRG00000009646	TSEN54	99	46.328	Pan_troglodytes
ENSPREG00000013090	tsen54	98	46.535	ENSPANG00000020133	TSEN54	98	46.931	Papio_anubis
ENSPREG00000013090	tsen54	99	54.182	ENSPKIG00000023018	tsen54	99	54.762	Paramormyrops_kingsleyae
ENSPREG00000013090	tsen54	80	44.626	ENSPSIG00000012807	TSEN54	100	44.393	Pelodiscus_sinensis
ENSPREG00000013090	tsen54	93	50.106	ENSPMGG00000019578	tsen54	100	49.894	Periophthalmus_magnuspinnatus
ENSPREG00000013090	tsen54	99	45.779	ENSPEMG00000014857	Tsen54	99	45.591	Peromyscus_maniculatus_bairdii
ENSPREG00000013090	tsen54	100	94.000	ENSPFOG00000022740	tsen54	100	94.000	Poecilia_formosa
ENSPREG00000013090	tsen54	100	95.363	ENSPLAG00000014847	tsen54	100	95.363	Poecilia_latipinna
ENSPREG00000013090	tsen54	100	95.161	ENSPMEG00000022876	tsen54	100	95.161	Poecilia_mexicana
ENSPREG00000013090	tsen54	90	48.148	ENSPPYG00000008629	TSEN54	99	48.052	Pongo_abelii
ENSPREG00000013090	tsen54	92	41.201	ENSPCAG00000002093	TSEN54	96	41.408	Procavia_capensis
ENSPREG00000013090	tsen54	98	45.714	ENSPCOG00000027880	TSEN54	99	46.286	Propithecus_coquereli
ENSPREG00000013090	tsen54	99	45.981	ENSPVAG00000008446	TSEN54	99	46.516	Pteropus_vampyrus
ENSPREG00000013090	tsen54	93	68.016	ENSPNYG00000010217	tsen54	100	68.016	Pundamilia_nyererei
ENSPREG00000013090	tsen54	99	56.513	ENSPNAG00000003770	tsen54	100	56.513	Pygocentrus_nattereri
ENSPREG00000013090	tsen54	99	46.529	ENSRNOG00000004598	Tsen54	99	45.966	Rattus_norvegicus
ENSPREG00000013090	tsen54	99	45.386	ENSRBIG00000043040	TSEN54	99	45.591	Rhinopithecus_bieti
ENSPREG00000013090	tsen54	99	45.386	ENSRROG00000030797	TSEN54	99	45.591	Rhinopithecus_roxellana
ENSPREG00000013090	tsen54	98	43.074	ENSSBOG00000013543	TSEN54	98	44.727	Saimiri_boliviensis_boliviensis
ENSPREG00000013090	tsen54	99	44.821	ENSSHAG00000018127	TSEN54	98	44.821	Sarcophilus_harrisii
ENSPREG00000013090	tsen54	80	54.545	ENSSFOG00015004093	tsen54	99	54.306	Scleropages_formosus
ENSPREG00000013090	tsen54	97	67.061	ENSSMAG00000012449	tsen54	98	67.653	Scophthalmus_maximus
ENSPREG00000013090	tsen54	100	70.962	ENSSDUG00000021506	tsen54	100	70.962	Seriola_dumerili
ENSPREG00000013090	tsen54	100	70.769	ENSSLDG00000016303	tsen54	100	70.769	Seriola_lalandi_dorsalis
ENSPREG00000013090	tsen54	79	43.192	ENSSPUG00000008988	TSEN54	96	42.588	Sphenodon_punctatus
ENSPREG00000013090	tsen54	93	73.134	ENSSPAG00000008098	-	99	73.134	Stegastes_partitus
ENSPREG00000013090	tsen54	80	67.327	ENSSPAG00000008047	tsen54	100	67.327	Stegastes_partitus
ENSPREG00000013090	tsen54	96	46.109	ENSSSCG00000036852	TSEN54	97	46.289	Sus_scrofa
ENSPREG00000013090	tsen54	85	46.903	ENSTGUG00000008548	TSEN54	99	46.239	Taeniopygia_guttata
ENSPREG00000013090	tsen54	100	67.530	ENSTRUG00000004230	tsen54	100	67.131	Takifugu_rubripes
ENSPREG00000013090	tsen54	96	65.587	ENSTNIG00000011281	tsen54	98	66.397	Tetraodon_nigroviridis
ENSPREG00000013090	tsen54	85	44.201	ENSTTRG00000015828	TSEN54	99	44.227	Tursiops_truncatus
ENSPREG00000013090	tsen54	80	43.023	ENSUAMG00000010045	TSEN54	99	43.488	Ursus_americanus
ENSPREG00000013090	tsen54	82	44.796	ENSUMAG00000008979	TSEN54	99	44.595	Ursus_maritimus
ENSPREG00000013090	tsen54	95	47.441	ENSVVUG00000011411	TSEN54	97	47.647	Vulpes_vulpes
ENSPREG00000013090	tsen54	97	45.817	ENSXETG00000012532	tsen54	100	62.500	Xenopus_tropicalis
ENSPREG00000013090	tsen54	97	84.134	ENSXCOG00000018245	tsen54	100	87.901	Xiphophorus_couchianus
ENSPREG00000013090	tsen54	100	93.750	ENSXMAG00000018818	tsen54	100	93.750	Xiphophorus_maculatus