EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000013108 (Gene tree)
Gene ID: 103468653
Gene Symbol: utp6
Alias: zgc:55648
Full Name: UTP6%2C small subunit processome component
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 7806 bases
Position: chrLG1:22969276-22977081
Accession: 103468653
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000019389	U3_assoc_6	PF08640.11	2.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000019596	-	2026	XM_008415867	ENSPREP00000019389	603 (aa)	XP_008414089	UPI0004A2CB0F

Gene Model

Click here to download ENSPREG00000013108's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000013108's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000013108	utp6	99	54.941	ENSG00000108651	UTP6	100	54.941	Homo_sapiens
ENSPREG00000013108	utp6	99	84.202	ENSAPOG00000000435	utp6	100	84.202	Acanthochromis_polyacanthus
ENSPREG00000013108	utp6	98	54.027	ENSAMEG00000005443	UTP6	99	54.027	Ailuropoda_melanoleuca
ENSPREG00000013108	utp6	99	79.160	ENSACIG00000004124	utp6	100	79.160	Amphilophus_citrinellus
ENSPREG00000013108	utp6	99	83.193	ENSAOCG00000016812	utp6	100	83.193	Amphiprion_ocellaris
ENSPREG00000013108	utp6	99	83.193	ENSAPEG00000023565	utp6	100	83.193	Amphiprion_percula
ENSPREG00000013108	utp6	99	84.370	ENSATEG00000003401	utp6	100	84.370	Anabas_testudineus
ENSPREG00000013108	utp6	97	54.160	ENSAPLG00000005821	UTP6	99	54.160	Anas_platyrhynchos
ENSPREG00000013108	utp6	99	56.449	ENSACAG00000009472	UTP6	100	56.449	Anolis_carolinensis
ENSPREG00000013108	utp6	99	55.109	ENSANAG00000034603	UTP6	100	55.109	Aotus_nancymaae
ENSPREG00000013108	utp6	99	83.025	ENSACLG00000006728	utp6	100	83.025	Astatotilapia_calliptera
ENSPREG00000013108	utp6	99	70.420	ENSAMXG00000009478	utp6	100	70.420	Astyanax_mexicanus
ENSPREG00000013108	utp6	99	52.007	ENSBTAG00000015612	UTP6	100	52.007	Bos_taurus
ENSPREG00000013108	utp6	99	50.669	ENSBTAG00000003769	-	98	50.669	Bos_taurus
ENSPREG00000013108	utp6	99	54.774	ENSCJAG00000014115	UTP6	100	54.774	Callithrix_jacchus
ENSPREG00000013108	utp6	99	54.348	ENSCAFG00000018507	UTP6	100	54.348	Canis_familiaris
ENSPREG00000013108	utp6	99	54.348	ENSCAFG00020014678	UTP6	100	54.348	Canis_lupus_dingo
ENSPREG00000013108	utp6	99	52.341	ENSCHIG00000009726	-	100	52.341	Capra_hircus
ENSPREG00000013108	utp6	99	52.341	ENSCHIG00000017954	-	100	52.341	Capra_hircus
ENSPREG00000013108	utp6	99	49.246	ENSTSYG00000002202	UTP6	99	49.246	Carlito_syrichta
ENSPREG00000013108	utp6	85	48.350	ENSCAPG00000017595	UTP6	93	48.350	Cavia_aperea
ENSPREG00000013108	utp6	99	55.369	ENSCPOG00000014294	UTP6	100	55.369	Cavia_porcellus
ENSPREG00000013108	utp6	99	50.586	ENSCCAG00000033318	-	100	50.586	Cebus_capucinus
ENSPREG00000013108	utp6	99	54.348	ENSCATG00000034868	UTP6	100	54.348	Cercocebus_atys
ENSPREG00000013108	utp6	99	55.705	ENSCLAG00000007274	UTP6	99	55.705	Chinchilla_lanigera
ENSPREG00000013108	utp6	99	54.515	ENSCSAG00000006595	UTP6	100	54.515	Chlorocebus_sabaeus
ENSPREG00000013108	utp6	72	46.377	ENSCHOG00000010940	-	73	46.377	Choloepus_hoffmanni
ENSPREG00000013108	utp6	99	58.291	ENSCPBG00000004652	UTP6	100	58.291	Chrysemys_picta_bellii
ENSPREG00000013108	utp6	98	31.220	ENSCING00000022947	-	99	31.220	Ciona_intestinalis
ENSPREG00000013108	utp6	53	37.082	ENSCSAVG00000011416	-	99	37.082	Ciona_savignyi
ENSPREG00000013108	utp6	87	39.163	ENSCANG00000031141	UTP6	90	39.163	Colobus_angolensis_palliatus
ENSPREG00000013108	utp6	99	54.104	ENSCGRG00001000046	Utp6	100	54.104	Cricetulus_griseus_chok1gshd
ENSPREG00000013108	utp6	93	52.473	ENSCGRG00000011543	Utp6	100	52.473	Cricetulus_griseus_crigri
ENSPREG00000013108	utp6	99	71.477	ENSCSEG00000013422	utp6	100	85.246	Cynoglossus_semilaevis
ENSPREG00000013108	utp6	99	87.395	ENSCVAG00000020322	utp6	100	87.395	Cyprinodon_variegatus
ENSPREG00000013108	utp6	99	67.227	ENSDARG00000098433	utp6	100	76.796	Danio_rerio
ENSPREG00000013108	utp6	99	55.092	ENSDNOG00000037018	UTP6	100	55.092	Dasypus_novemcinctus
ENSPREG00000013108	utp6	94	52.743	ENSDORG00000003843	Utp6	99	55.331	Dipodomys_ordii
ENSPREG00000013108	utp6	99	55.017	ENSEASG00005010870	UTP6	100	55.017	Equus_asinus_asinus
ENSPREG00000013108	utp6	99	55.017	ENSECAG00000022217	UTP6	100	55.017	Equus_caballus
ENSPREG00000013108	utp6	99	73.950	ENSELUG00000006618	utp6	100	73.950	Esox_lucius
ENSPREG00000013108	utp6	99	53.088	ENSFCAG00000015795	UTP6	100	53.088	Felis_catus
ENSPREG00000013108	utp6	99	57.286	ENSFALG00000002282	UTP6	100	57.286	Ficedula_albicollis
ENSPREG00000013108	utp6	99	55.369	ENSFDAG00000019506	UTP6	100	55.369	Fukomys_damarensis
ENSPREG00000013108	utp6	99	83.866	ENSFHEG00000010373	utp6	100	83.866	Fundulus_heteroclitus
ENSPREG00000013108	utp6	99	71.597	ENSGMOG00000011958	utp6	100	71.597	Gadus_morhua
ENSPREG00000013108	utp6	99	57.286	ENSGALG00000003260	UTP6	100	57.286	Gallus_gallus
ENSPREG00000013108	utp6	99	93.445	ENSGAFG00000008505	utp6	100	93.445	Gambusia_affinis
ENSPREG00000013108	utp6	99	81.681	ENSGACG00000019424	utp6	100	81.681	Gasterosteus_aculeatus
ENSPREG00000013108	utp6	99	57.621	ENSGAGG00000004820	UTP6	100	57.621	Gopherus_agassizii
ENSPREG00000013108	utp6	99	45.638	ENSGGOG00000026003	-	100	45.638	Gorilla_gorilla
ENSPREG00000013108	utp6	99	55.276	ENSGGOG00000013569	UTP6	100	55.276	Gorilla_gorilla
ENSPREG00000013108	utp6	99	83.025	ENSHBUG00000018668	utp6	100	83.025	Haplochromis_burtoni
ENSPREG00000013108	utp6	98	51.771	ENSHGLG00000008642	-	99	51.771	Heterocephalus_glaber_female
ENSPREG00000013108	utp6	99	55.537	ENSHGLG00000010332	UTP6	100	55.537	Heterocephalus_glaber_female
ENSPREG00000013108	utp6	99	53.020	ENSHGLG00100014271	-	100	53.020	Heterocephalus_glaber_male
ENSPREG00000013108	utp6	94	52.641	ENSHGLG00100006047	-	99	52.641	Heterocephalus_glaber_male
ENSPREG00000013108	utp6	99	76.639	ENSHCOG00000017277	utp6	100	76.639	Hippocampus_comes
ENSPREG00000013108	utp6	99	68.403	ENSIPUG00000022587	Utp6	100	68.403	Ictalurus_punctatus
ENSPREG00000013108	utp6	99	56.281	ENSSTOG00000015875	UTP6	100	56.281	Ictidomys_tridecemlineatus
ENSPREG00000013108	utp6	99	84.370	ENSKMAG00000021631	utp6	100	84.370	Kryptolebias_marmoratus
ENSPREG00000013108	utp6	99	82.857	ENSLBEG00000002115	utp6	100	82.857	Labrus_bergylta
ENSPREG00000013108	utp6	99	61.977	ENSLACG00000017158	UTP6	100	61.977	Latimeria_chalumnae
ENSPREG00000013108	utp6	93	65.125	ENSLOCG00000013797	utp6	93	65.125	Lepisosteus_oculatus
ENSPREG00000013108	utp6	99	54.348	ENSLAFG00000013008	UTP6	100	54.348	Loxodonta_africana
ENSPREG00000013108	utp6	98	40.709	ENSMFAG00000041904	-	92	47.138	Macaca_fascicularis
ENSPREG00000013108	utp6	99	54.348	ENSMFAG00000038842	UTP6	100	54.348	Macaca_fascicularis
ENSPREG00000013108	utp6	99	54.348	ENSMMUG00000020403	UTP6	100	54.348	Macaca_mulatta
ENSPREG00000013108	utp6	99	54.348	ENSMNEG00000039480	UTP6	100	54.348	Macaca_nemestrina
ENSPREG00000013108	utp6	99	43.980	ENSMLEG00000039364	-	100	43.813	Mandrillus_leucophaeus
ENSPREG00000013108	utp6	99	48.829	ENSMLEG00000032174	UTP6	100	48.662	Mandrillus_leucophaeus
ENSPREG00000013108	utp6	99	83.193	ENSMAMG00000002228	utp6	99	83.193	Mastacembelus_armatus
ENSPREG00000013108	utp6	99	83.025	ENSMZEG00005023895	utp6	100	83.025	Maylandia_zebra
ENSPREG00000013108	utp6	94	55.458	ENSMGAG00000008111	UTP6	100	55.458	Meleagris_gallopavo
ENSPREG00000013108	utp6	99	54.104	ENSMAUG00000021895	Utp6	100	54.104	Mesocricetus_auratus
ENSPREG00000013108	utp6	99	53.512	ENSMICG00000002632	UTP6	100	53.512	Microcebus_murinus
ENSPREG00000013108	utp6	99	54.104	ENSMOCG00000014163	Utp6	100	54.104	Microtus_ochrogaster
ENSPREG00000013108	utp6	99	77.815	ENSMMOG00000008653	utp6	100	81.356	Mola_mola
ENSPREG00000013108	utp6	99	56.406	ENSMODG00000019206	UTP6	100	56.406	Monodelphis_domestica
ENSPREG00000013108	utp6	99	83.697	ENSMALG00000021112	utp6	100	83.697	Monopterus_albus
ENSPREG00000013108	utp6	99	54.104	MGP_CAROLIEiJ_G0016828	Utp6	100	54.104	Mus_caroli
ENSPREG00000013108	utp6	99	54.271	ENSMUSG00000035575	Utp6	100	54.271	Mus_musculus
ENSPREG00000013108	utp6	99	50.419	MGP_PahariEiJ_G0017965	Utp6	100	50.251	Mus_pahari
ENSPREG00000013108	utp6	99	54.104	MGP_SPRETEiJ_G0017672	Utp6	100	54.104	Mus_spretus
ENSPREG00000013108	utp6	99	53.434	ENSMPUG00000014581	UTP6	100	53.434	Mustela_putorius_furo
ENSPREG00000013108	utp6	99	55.017	ENSMLUG00000016422	UTP6	100	55.017	Myotis_lucifugus
ENSPREG00000013108	utp6	99	54.941	ENSNGAG00000015482	Utp6	100	54.941	Nannospalax_galili
ENSPREG00000013108	utp6	99	83.025	ENSNBRG00000019714	utp6	100	83.025	Neolamprologus_brichardi
ENSPREG00000013108	utp6	99	54.271	ENSNLEG00000011009	UTP6	100	54.271	Nomascus_leucogenys
ENSPREG00000013108	utp6	87	57.447	ENSOPRG00000008446	-	89	57.447	Ochotona_princeps
ENSPREG00000013108	utp6	65	62.025	ENSODEG00000011971	UTP6	98	62.025	Octodon_degus
ENSPREG00000013108	utp6	99	82.353	ENSONIG00000018090	utp6	100	82.353	Oreochromis_niloticus
ENSPREG00000013108	utp6	97	55.952	ENSOANG00000004279	UTP6	99	55.952	Ornithorhynchus_anatinus
ENSPREG00000013108	utp6	99	54.439	ENSOCUG00000016980	UTP6	99	54.439	Oryctolagus_cuniculus
ENSPREG00000013108	utp6	99	80.471	ENSORLG00000003546	utp6	64	80.471	Oryzias_latipes
ENSPREG00000013108	utp6	99	80.471	ENSORLG00020010377	utp6	99	80.471	Oryzias_latipes_hni
ENSPREG00000013108	utp6	99	80.135	ENSORLG00015008893	utp6	99	80.135	Oryzias_latipes_hsok
ENSPREG00000013108	utp6	99	80.840	ENSOMEG00000017487	utp6	100	80.840	Oryzias_melastigma
ENSPREG00000013108	utp6	86	48.762	ENSOGAG00000004511	UTP6	100	48.571	Otolemur_garnettii
ENSPREG00000013108	utp6	99	52.508	ENSOARG00000013474	UTP6	100	52.508	Ovis_aries
ENSPREG00000013108	utp6	99	55.109	ENSPPAG00000038089	UTP6	100	55.109	Pan_paniscus
ENSPREG00000013108	utp6	99	45.973	ENSPPAG00000016895	-	100	45.973	Pan_paniscus
ENSPREG00000013108	utp6	99	55.184	ENSPPRG00000001010	UTP6	100	55.184	Panthera_pardus
ENSPREG00000013108	utp6	99	55.184	ENSPTIG00000013913	UTP6	100	55.184	Panthera_tigris_altaica
ENSPREG00000013108	utp6	99	55.109	ENSPTRG00000008977	UTP6	100	55.109	Pan_troglodytes
ENSPREG00000013108	utp6	99	45.973	ENSPTRG00000044798	-	100	45.973	Pan_troglodytes
ENSPREG00000013108	utp6	99	43.719	ENSPANG00000034274	-	100	43.551	Papio_anubis
ENSPREG00000013108	utp6	99	52.087	ENSPANG00000023113	UTP6	100	52.087	Papio_anubis
ENSPREG00000013108	utp6	99	68.896	ENSPKIG00000004653	utp6	100	68.896	Paramormyrops_kingsleyae
ENSPREG00000013108	utp6	99	57.886	ENSPSIG00000012435	UTP6	100	57.886	Pelodiscus_sinensis
ENSPREG00000013108	utp6	99	80.336	ENSPMGG00000009548	utp6	100	80.336	Periophthalmus_magnuspinnatus
ENSPREG00000013108	utp6	99	53.434	ENSPEMG00000014081	Utp6	100	53.434	Peromyscus_maniculatus_bairdii
ENSPREG00000013108	utp6	92	43.463	ENSPMAG00000009561	utp6	100	43.463	Petromyzon_marinus
ENSPREG00000013108	utp6	99	58.794	ENSPCIG00000029968	UTP6	86	58.794	Phascolarctos_cinereus
ENSPREG00000013108	utp6	99	94.622	ENSPFOG00000013918	utp6	100	94.622	Poecilia_formosa
ENSPREG00000013108	utp6	99	94.454	ENSPLAG00000017825	utp6	100	94.454	Poecilia_latipinna
ENSPREG00000013108	utp6	99	95.126	ENSPMEG00000008133	utp6	100	95.126	Poecilia_mexicana
ENSPREG00000013108	utp6	99	52.429	ENSPPYG00000008154	UTP6	100	52.429	Pongo_abelii
ENSPREG00000013108	utp6	99	53.679	ENSPCOG00000010224	UTP6	100	53.679	Propithecus_coquereli
ENSPREG00000013108	utp6	99	51.085	ENSPVAG00000015759	UTP6	100	51.085	Pteropus_vampyrus
ENSPREG00000013108	utp6	99	82.689	ENSPNYG00000002290	utp6	100	82.689	Pundamilia_nyererei
ENSPREG00000013108	utp6	99	66.891	ENSPNAG00000027370	utp6	100	66.891	Pygocentrus_nattereri
ENSPREG00000013108	utp6	99	53.769	ENSRNOG00000014209	Utp6	100	53.769	Rattus_norvegicus
ENSPREG00000013108	utp6	99	54.181	ENSRBIG00000020822	UTP6	100	54.181	Rhinopithecus_bieti
ENSPREG00000013108	utp6	99	54.181	ENSRROG00000036838	UTP6	100	54.181	Rhinopithecus_roxellana
ENSPREG00000013108	utp6	99	68.227	ENSSFOG00015005978	utp6	100	68.227	Scleropages_formosus
ENSPREG00000013108	utp6	99	83.866	ENSSMAG00000014772	utp6	100	83.866	Scophthalmus_maximus
ENSPREG00000013108	utp6	99	85.210	ENSSDUG00000000329	utp6	100	85.210	Seriola_dumerili
ENSPREG00000013108	utp6	99	84.034	ENSSLDG00000016724	utp6	100	84.034	Seriola_lalandi_dorsalis
ENSPREG00000013108	utp6	98	48.154	ENSSARG00000010778	UTP6	99	48.154	Sorex_araneus
ENSPREG00000013108	utp6	99	58.961	ENSSPUG00000005273	UTP6	100	58.961	Sphenodon_punctatus
ENSPREG00000013108	utp6	99	81.849	ENSSPAG00000011871	utp6	99	81.849	Stegastes_partitus
ENSPREG00000013108	utp6	99	55.184	ENSSSCG00000017745	UTP6	100	55.184	Sus_scrofa
ENSPREG00000013108	utp6	99	56.784	ENSTGUG00000004999	UTP6	100	56.784	Taeniopygia_guttata
ENSPREG00000013108	utp6	99	78.114	ENSTRUG00000012005	utp6	100	78.114	Takifugu_rubripes
ENSPREG00000013108	utp6	99	77.778	ENSTNIG00000003235	utp6	100	77.778	Tetraodon_nigroviridis
ENSPREG00000013108	utp6	67	56.354	ENSTBEG00000005388	-	67	56.354	Tupaia_belangeri
ENSPREG00000013108	utp6	99	54.682	ENSTTRG00000009911	UTP6	100	54.682	Tursiops_truncatus
ENSPREG00000013108	utp6	98	54.027	ENSUMAG00000015139	UTP6	99	54.027	Ursus_maritimus
ENSPREG00000013108	utp6	99	54.515	ENSVPAG00000005782	UTP6	100	54.515	Vicugna_pacos
ENSPREG00000013108	utp6	99	54.515	ENSVVUG00000012238	UTP6	100	54.515	Vulpes_vulpes
ENSPREG00000013108	utp6	99	50.084	ENSXETG00000020057	utp6	100	50.084	Xenopus_tropicalis
ENSPREG00000013108	utp6	99	92.295	ENSXCOG00000013626	utp6	100	93.243	Xiphophorus_couchianus
ENSPREG00000013108	utp6	99	92.437	ENSXMAG00000017414	utp6	100	92.437	Xiphophorus_maculatus