EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPREG00000013122 (Gene tree)
Gene ID
103480466
Gene Symbol
polr2a
Alias
im:7136071
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Plus strand
Length
16112 bases
Position
chrLG18:10600209-10616320
Accession
103480466
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000019552RNA_pol_Rpb1_5PF04998.172.9e-10111
ENSPREP00000019508RNA_pol_Rpb1_5PF04998.173.1e-10111
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-30134
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-30234
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-30334
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-30434
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-30534
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-30634
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-30734
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-30834
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-30934
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-301034
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-301134
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-301234
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-301334
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-301434
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-301534
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-301634
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-301734
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-301834
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-301934
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-302034
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-302134
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-302234
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-302334
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-302434
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-302534
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-302634
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-302734
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-302834
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-302934
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-303034
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-303134
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-303234
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-303334
ENSPREP00000019552RNA_pol_Rpb1_RPF05001.132.1e-303434
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-25134
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-25234
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-25334
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-25434
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-25534
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-25634
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-25734
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-25834
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-25934
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-251034
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-251134
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-251234
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-251334
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-251434
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-251534
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-251634
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-251734
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-251834
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-251934
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-252034
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-252134
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-252234
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-252334
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-252434
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-252534
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-252634
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-252734
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-252834
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-252934
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-253034
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-253134
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-253234
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-253334
ENSPREP00000019508RNA_pol_Rpb1_RPF05001.133.5e-253434
ENSPREP00000019552RNA_pol_Rpb1_4PF05000.171.2e-3711
ENSPREP00000019508RNA_pol_Rpb1_4PF05000.171.3e-3711
ENSPREP00000019552RNA_pol_Rpb1_2PF00623.201e-7411
ENSPREP00000019508RNA_pol_Rpb1_2PF00623.201.1e-7411
ENSPREP00000019552RNA_pol_Rpb1_3PF04983.182.9e-5011
ENSPREP00000019508RNA_pol_Rpb1_3PF04983.183e-5011
ENSPREP00000019552RNA_pol_Rpb1_1PF04997.127.3e-10911
ENSPREP00000019508RNA_pol_Rpb1_1PF04997.127.6e-10911
ENSPREP00000019552RNA_pol_Rpb1_7PF04990.126.4e-5511
ENSPREP00000019508RNA_pol_Rpb1_7PF04990.126.6e-5511
ENSPREP00000019552RNA_pol_Rpb1_6PF04992.149.5e-6711
ENSPREP00000019508RNA_pol_Rpb1_6PF04992.149.9e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000019718-10898XM_008435419ENSPREP000000195081966 (aa)XP_008433641UPI0004A43B44
ENSPRET00000019762-5787-ENSPREP000000195521928 (aa)--
Gene Model
Click here to download ENSPREG00000013122's gene model file
Pathways
Pathway IDPathway NameSource
pret03020RNA polymeraseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000013122's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPREG00000013122polr2a6837.053ENSPREG00000002385polr3a9832.368
ENSPREG00000013122polr2a5834.286ENSPREG00000002389polr1a7133.962
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000013122polr2a8798.511ENSAPOG00000006552polr2a9098.511Acanthochromis_polyacanthus
ENSPREG00000013122polr2a8294.176ENSAMEG00000016265-8294.183Ailuropoda_melanoleuca
ENSPREG00000013122polr2a10098.755ENSACIG00000015982polr2a10098.755Amphilophus_citrinellus
ENSPREG00000013122polr2a10096.661ENSAOCG00000004255polr2a10094.865Amphiprion_ocellaris
ENSPREG00000013122polr2a10098.911ENSAPEG00000012623polr2a10098.911Amphiprion_percula
ENSPREG00000013122polr2a10098.392ENSATEG00000019644polr2a10098.392Anabas_testudineus
ENSPREG00000013122polr2a8294.658ENSACAG00000014561POLR2A8294.665Anolis_carolinensis
ENSPREG00000013122polr2a8294.538ENSANAG00000020093-8294.667Aotus_nancymaae
ENSPREG00000013122polr2a10098.185ENSACLG00000006735polr2a10098.185Astatotilapia_calliptera
ENSPREG00000013122polr2a10097.770ENSAMXG00000020046polr2a10097.770Astyanax_mexicanus
ENSPREG00000013122polr2a8294.538ENSBTAG00000046765POLR2A8294.544Bos_taurus
ENSPREG00000013122polr2a9871.429WBGene00000123ama-19979.612Caenorhabditis_elegans
ENSPREG00000013122polr2a8694.475ENSCAFG00000016532POLR2A9994.482Canis_familiaris
ENSPREG00000013122polr2a8293.610ENSCAFG00020007929-8293.618Canis_lupus_dingo
ENSPREG00000013122polr2a8294.538ENSCHIG00000027173-8294.544Capra_hircus
ENSPREG00000013122polr2a9292.179ENSTSYG00000012803-8591.832Carlito_syrichta
ENSPREG00000013122polr2a9890.995ENSCAPG00000001882-10093.552Cavia_aperea
ENSPREG00000013122polr2a9988.877ENSCPOG00000014812-10093.366Cavia_porcellus
ENSPREG00000013122polr2a8294.538ENSCCAG00000020938-8294.667Cebus_capucinus
ENSPREG00000013122polr2a8294.538ENSCATG00000013680-8294.544Cercocebus_atys
ENSPREG00000013122polr2a8294.413ENSCLAG00000012196-8294.540Chinchilla_lanigera
ENSPREG00000013122polr2a8285.750ENSCSAG00000011644-8285.767Chlorocebus_sabaeus
ENSPREG00000013122polr2a9083.901ENSCPBG00000012697POLR2A9985.724Chrysemys_picta_bellii
ENSPREG00000013122polr2a9876.610ENSCING00000007884-9977.166Ciona_intestinalis
ENSPREG00000013122polr2a9879.630ENSCSAVG00000008334-9981.731Ciona_savignyi
ENSPREG00000013122polr2a8293.855ENSCANG00000010622-8293.862Colobus_angolensis_palliatus
ENSPREG00000013122polr2a8189.383ENSCGRG00001003538Polr2a8587.103Cricetulus_griseus_chok1gshd
ENSPREG00000013122polr2a8290.842ENSCGRG00000012105Polr2a9390.625Cricetulus_griseus_crigri
ENSPREG00000013122polr2a9997.457ENSCSEG00000002635polr2a10097.457Cynoglossus_semilaevis
ENSPREG00000013122polr2a10099.695ENSCVAG00000005156polr2a10099.695Cyprinodon_variegatus
ENSPREG00000013122polr2a10097.458ENSDARG00000099966polr2a10097.458Danio_rerio
ENSPREG00000013122polr2a8291.167ENSDNOG00000016482-8291.178Dasypus_novemcinctus
ENSPREG00000013122polr2a8294.538ENSDORG00000008667Polr2a8294.667Dipodomys_ordii
ENSPREG00000013122polr2a9970.042FBgn0003277RpII2159974.346Drosophila_melanogaster
ENSPREG00000013122polr2a9490.325ENSETEG00000002540-8791.438Echinops_telfairi
ENSPREG00000013122polr2a8287.274ENSEBUG00000013967polr2a8287.259Eptatretus_burgeri
ENSPREG00000013122polr2a8292.489ENSEASG00005019114-8392.498Equus_asinus_asinus
ENSPREG00000013122polr2a8294.538ENSECAG00000018485POLR2A8294.544Equus_caballus
ENSPREG00000013122polr2a8594.393ENSEEUG00000001154-9594.393Erinaceus_europaeus
ENSPREG00000013122polr2a8895.331ENSELUG00000014284polr2a8495.331Esox_lucius
ENSPREG00000013122polr2a8294.475ENSFDAG00000008287-8294.482Fukomys_damarensis
ENSPREG00000013122polr2a9999.269ENSFHEG00000001768polr2a10099.269Fundulus_heteroclitus
ENSPREG00000013122polr2a9993.193ENSGMOG00000007725polr2a10093.193Gadus_morhua
ENSPREG00000013122polr2a99100.000ENSGAFG00000005389polr2a10095.884Gambusia_affinis
ENSPREG00000013122polr2a9993.954ENSGACG00000019366polr2a10093.731Gasterosteus_aculeatus
ENSPREG00000013122polr2a8292.446ENSGGOG00000014800-9693.096Gorilla_gorilla
ENSPREG00000013122polr2a9998.123ENSHBUG00000018937polr2a10098.111Haplochromis_burtoni
ENSPREG00000013122polr2a8294.475ENSHGLG00000012381POLR2A8294.603Heterocephalus_glaber_female
ENSPREG00000013122polr2a8294.475ENSHGLG00100014843POLR2A8294.603Heterocephalus_glaber_male
ENSPREG00000013122polr2a10097.915ENSHCOG00000011874polr2a10097.915Hippocampus_comes
ENSPREG00000013122polr2a10097.304ENSIPUG00000002613Polr2a10097.304Ictalurus_punctatus
ENSPREG00000013122polr2a8294.538ENSSTOG00000001304-8294.667Ictidomys_tridecemlineatus
ENSPREG00000013122polr2a8294.538ENSJJAG00000013049Polr2a8294.667Jaculus_jaculus
ENSPREG00000013122polr2a82100.000ENSKMAG00000016343polr2a86100.000Kryptolebias_marmoratus
ENSPREG00000013122polr2a9998.339ENSLBEG00000027652polr2a10098.339Labrus_bergylta
ENSPREG00000013122polr2a8085.389ENSLACG00000012071POLR2A8185.461Latimeria_chalumnae
ENSPREG00000013122polr2a8997.290ENSLOCG00000013863polr2a9796.834Lepisosteus_oculatus
ENSPREG00000013122polr2a9991.272ENSLAFG00000008626-9794.544Loxodonta_africana
ENSPREG00000013122polr2a5193.361ENSMFAG00000007042-9993.361Macaca_fascicularis
ENSPREG00000013122polr2a8294.538ENSMMUG00000023620-9194.544Macaca_mulatta
ENSPREG00000013122polr2a8294.103ENSMNEG00000040407-8294.110Macaca_nemestrina
ENSPREG00000013122polr2a8090.078ENSMLEG00000030263-9993.361Mandrillus_leucophaeus
ENSPREG00000013122polr2a10098.474ENSMAMG00000003351polr2a10098.474Mastacembelus_armatus
ENSPREG00000013122polr2a10098.169ENSMZEG00005021429polr2a10098.169Maylandia_zebra
ENSPREG00000013122polr2a5194.190ENSMAUG00000021055-9994.190Mesocricetus_auratus
ENSPREG00000013122polr2a8294.475ENSMICG00000013372-9893.756Microcebus_murinus
ENSPREG00000013122polr2a9992.195ENSMOCG00000018279Polr2a10092.205Microtus_ochrogaster
ENSPREG00000013122polr2a9097.395ENSMMOG00000012515polr2a9297.395Mola_mola
ENSPREG00000013122polr2a8294.289ENSMODG00000007009-8294.296Monodelphis_domestica
ENSPREG00000013122polr2a9395.105ENSMALG00000008716polr2a9998.094Monopterus_albus
ENSPREG00000013122polr2a8294.538MGP_CAROLIEiJ_G0016587Polr2a8294.667Mus_caroli
ENSPREG00000013122polr2a8294.538ENSMUSG00000005198Polr2a8294.667Mus_musculus
ENSPREG00000013122polr2a8292.398MGP_PahariEiJ_G0017718Polr2a8292.407Mus_pahari
ENSPREG00000013122polr2a8294.538MGP_SPRETEiJ_G0017423Polr2a8294.667Mus_spretus
ENSPREG00000013122polr2a8294.413ENSMPUG00000009648-8294.420Mustela_putorius_furo
ENSPREG00000013122polr2a8293.924ENSMLUG00000009088-8293.932Myotis_lucifugus
ENSPREG00000013122polr2a8294.538ENSNGAG00000002543Polr2a8294.667Nannospalax_galili
ENSPREG00000013122polr2a10098.340ENSNBRG00000002005polr2a10098.340Neolamprologus_brichardi
ENSPREG00000013122polr2a8194.660ENSNLEG00000009460-8294.667Nomascus_leucogenys
ENSPREG00000013122polr2a9495.316ENSMEUG00000008611-9395.316Notamacropus_eugenii
ENSPREG00000013122polr2a8094.251ENSOPRG00000015116-9994.251Ochotona_princeps
ENSPREG00000013122polr2a8794.389ENSODEG00000017674-8590.012Octodon_degus
ENSPREG00000013122polr2a10098.423ENSONIG00000009231polr2a10098.423Oreochromis_niloticus
ENSPREG00000013122polr2a9990.460ENSOCUG00000017929-10094.420Oryctolagus_cuniculus
ENSPREG00000013122polr2a10098.779ENSORLG00000006431polr2a10098.779Oryzias_latipes
ENSPREG00000013122polr2a10098.779ENSORLG00020010235polr2a10098.779Oryzias_latipes_hni
ENSPREG00000013122polr2a10098.678ENSORLG00015007075polr2a10098.678Oryzias_latipes_hsok
ENSPREG00000013122polr2a9896.017ENSOMEG00000010713polr2a10098.444Oryzias_melastigma
ENSPREG00000013122polr2a8294.538ENSOGAG00000033608-8294.544Otolemur_garnettii
ENSPREG00000013122polr2a9194.538ENSOARG00000013874-10094.544Ovis_aries
ENSPREG00000013122polr2a8194.562ENSPPAG00000043734-8990.215Pan_paniscus
ENSPREG00000013122polr2a8194.660ENSPTRG00000008691POLR2A8294.667Pan_troglodytes
ENSPREG00000013122polr2a8293.855ENSPANG00000024099-8293.968Papio_anubis
ENSPREG00000013122polr2a7795.721ENSPKIG00000005727polr2a8595.564Paramormyrops_kingsleyae
ENSPREG00000013122polr2a9892.710ENSPSIG00000014006POLR2A10092.627Pelodiscus_sinensis
ENSPREG00000013122polr2a10097.628ENSPMGG00000019734polr2a10097.628Periophthalmus_magnuspinnatus
ENSPREG00000013122polr2a8294.538ENSPEMG00000012521Polr2a8294.667Peromyscus_maniculatus_bairdii
ENSPREG00000013122polr2a8694.293ENSPCIG00000028851-8294.293Phascolarctos_cinereus
ENSPREG00000013122polr2a9999.947ENSPFOG00000007890polr2a9999.947Poecilia_formosa
ENSPREG00000013122polr2a9999.947ENSPLAG00000007399polr2a9999.947Poecilia_latipinna
ENSPREG00000013122polr2a10099.946ENSPMEG00000002071polr2a9999.947Poecilia_mexicana
ENSPREG00000013122polr2a8294.538ENSPPYG00000007924-8294.544Pongo_abelii
ENSPREG00000013122polr2a7494.868ENSPCAG00000006951-7494.868Procavia_capensis
ENSPREG00000013122polr2a8194.660ENSPCOG00000025260-8294.667Propithecus_coquereli
ENSPREG00000013122polr2a8294.227ENSPVAG00000005069-8294.234Pteropus_vampyrus
ENSPREG00000013122polr2a10098.220ENSPNYG00000022340polr2a10098.220Pundamilia_nyererei
ENSPREG00000013122polr2a10098.016ENSPNAG00000011237polr2a10098.016Pygocentrus_nattereri
ENSPREG00000013122polr2a8294.475ENSRNOG00000028834Polr2a8294.482Rattus_norvegicus
ENSPREG00000013122polr2a8294.165ENSRBIG00000002471-9194.172Rhinopithecus_bieti
ENSPREG00000013122polr2a8294.538ENSRROG00000029583-8993.676Rhinopithecus_roxellana
ENSPREG00000013122polr2a8250.877YDL140CRPO219983.544Saccharomyces_cerevisiae
ENSPREG00000013122polr2a8294.538ENSSBOG00000000808-8294.667Saimiri_boliviensis_boliviensis
ENSPREG00000013122polr2a9394.289ENSSHAG00000002858-8494.296Sarcophilus_harrisii
ENSPREG00000013122polr2a9997.720ENSSFOG00015023275polr2a10097.720Scleropages_formosus
ENSPREG00000013122polr2a10095.829ENSSMAG00000009137polr2a10095.320Scophthalmus_maximus
ENSPREG00000013122polr2a10098.600ENSSDUG00000020466polr2a10098.600Seriola_dumerili
ENSPREG00000013122polr2a10098.548ENSSLDG00000020613polr2a10098.548Seriola_lalandi_dorsalis
ENSPREG00000013122polr2a9788.218ENSSARG00000005875-9991.016Sorex_araneus
ENSPREG00000013122polr2a100100.000ENSSPAG00000016741polr2a95100.000Stegastes_partitus
ENSPREG00000013122polr2a8293.606ENSSSCG00000028278-8293.614Sus_scrofa
ENSPREG00000013122polr2a9892.312ENSTRUG00000012320polr2a8192.312Takifugu_rubripes
ENSPREG00000013122polr2a9596.650ENSTNIG00000010136polr2a10096.650Tetraodon_nigroviridis
ENSPREG00000013122polr2a7694.898ENSTBEG00000013294-5894.898Tupaia_belangeri
ENSPREG00000013122polr2a8292.862ENSTTRG00000014273-8292.870Tursiops_truncatus
ENSPREG00000013122polr2a9394.230ENSUAMG00000014866-10091.589Ursus_americanus
ENSPREG00000013122polr2a7491.913ENSUMAG00000015732-8389.944Ursus_maritimus
ENSPREG00000013122polr2a6598.370ENSVPAG00000008842-7698.370Vicugna_pacos
ENSPREG00000013122polr2a8294.475ENSVVUG00000027878-8394.482Vulpes_vulpes
ENSPREG00000013122polr2a8194.084ENSXETG00000012465polr2a8294.092Xenopus_tropicalis
ENSPREG00000013122polr2a9699.099ENSXCOG00000001804polr2a10099.099Xiphophorus_couchianus
ENSPREG00000013122polr2a10099.847ENSXMAG00000015687polr2a10099.847Xiphophorus_maculatus

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