EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000013331 (Gene tree)
Gene ID: 103461037
Gene Symbol: si:ch1073-55a19.2
Alias: -
Full Name: ranBP2-like and GRIP domain-containing protein 4
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 28040 bases
Position: chrLG2:36615707-36643746
Accession: 103461037
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000020026	zf-RanBP	PF00641.18	8.2e-23	1	3
ENSPREP00000020026	zf-RanBP	PF00641.18	8.2e-23	2	3
ENSPREP00000020026	zf-RanBP	PF00641.18	8.2e-23	3	3
ENSPREP00000019992	zf-RanBP	PF00641.18	8.3e-23	1	3
ENSPREP00000019992	zf-RanBP	PF00641.18	8.3e-23	2	3
ENSPREP00000019992	zf-RanBP	PF00641.18	8.3e-23	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000020274	-	483	-	ENSPREP00000020063	160 (aa)	-	-
ENSPRET00000020204	-	8496	XM_017302497	ENSPREP00000019992	2831 (aa)	XP_017157986	-
ENSPRET00000020278	-	474	-	ENSPREP00000020066	157 (aa)	-	-
ENSPRET00000020236	-	8433	-	ENSPREP00000020026	2810 (aa)	-	-

Gene Model

Click here to download ENSPREG00000013331's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000013331's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000013331	si:ch1073-55a19.2	99	66.923	ENSG00000153201	RANBP2	90	67.391	Homo_sapiens
ENSPREG00000013331	si:ch1073-55a19.2	100	73.188	ENSAPOG00000017146	si:ch1073-55a19.2	97	86.807	Acanthochromis_polyacanthus
ENSPREG00000013331	si:ch1073-55a19.2	97	68.217	ENSAMEG00000013078	RANBP2	98	68.217	Ailuropoda_melanoleuca
ENSPREG00000013331	si:ch1073-55a19.2	100	73.153	ENSACIG00000001203	si:ch1073-55a19.2	100	72.875	Amphilophus_citrinellus
ENSPREG00000013331	si:ch1073-55a19.2	99	85.602	ENSAPEG00000012495	si:ch1073-55a19.2	99	85.602	Amphiprion_percula
ENSPREG00000013331	si:ch1073-55a19.2	100	71.518	ENSATEG00000001716	si:ch1073-55a19.2	97	81.841	Anabas_testudineus
ENSPREG00000013331	si:ch1073-55a19.2	93	61.905	ENSACAG00000002091	RANBP2	98	61.905	Anolis_carolinensis
ENSPREG00000013331	si:ch1073-55a19.2	99	66.410	ENSANAG00000023124	RANBP2	98	66.410	Aotus_nancymaae
ENSPREG00000013331	si:ch1073-55a19.2	100	71.527	ENSACLG00000020500	si:ch1073-55a19.2	99	83.029	Astatotilapia_calliptera
ENSPREG00000013331	si:ch1073-55a19.2	100	54.104	ENSBTAG00000000152	RANBP2	100	56.093	Bos_taurus
ENSPREG00000013331	si:ch1073-55a19.2	100	52.213	ENSCJAG00000001189	RANBP2	99	66.154	Callithrix_jacchus
ENSPREG00000013331	si:ch1073-55a19.2	99	76.471	ENSCAFG00000023061	RANBP2	100	76.471	Canis_familiaris
ENSPREG00000013331	si:ch1073-55a19.2	100	52.381	ENSCAFG00020009314	RANBP2	100	51.617	Canis_lupus_dingo
ENSPREG00000013331	si:ch1073-55a19.2	100	53.405	ENSCHIG00000012686	RANBP2	100	49.355	Capra_hircus
ENSPREG00000013331	si:ch1073-55a19.2	98	68.734	ENSTSYG00000001656	RANBP2	98	68.734	Carlito_syrichta
ENSPREG00000013331	si:ch1073-55a19.2	95	64.908	ENSCAPG00000010687	RANBP2	96	64.908	Cavia_aperea
ENSPREG00000013331	si:ch1073-55a19.2	100	49.340	ENSCPOG00000000392	RANBP2	100	54.422	Cavia_porcellus
ENSPREG00000013331	si:ch1073-55a19.2	100	55.224	ENSCCAG00000028166	RANBP2	99	67.179	Cebus_capucinus
ENSPREG00000013331	si:ch1073-55a19.2	99	54.124	ENSCATG00000032597	RANBP2	99	48.894	Cercocebus_atys
ENSPREG00000013331	si:ch1073-55a19.2	100	52.800	ENSCLAG00000010533	RANBP2	100	52.559	Chinchilla_lanigera
ENSPREG00000013331	si:ch1073-55a19.2	99	67.179	ENSCSAG00000017019	RANBP2	99	56.013	Chlorocebus_sabaeus
ENSPREG00000013331	si:ch1073-55a19.2	64	64.000	ENSCHOG00000012659	-	58	64.000	Choloepus_hoffmanni
ENSPREG00000013331	si:ch1073-55a19.2	100	55.147	ENSCPBG00000006985	RANBP2	99	67.460	Chrysemys_picta_bellii
ENSPREG00000013331	si:ch1073-55a19.2	93	67.436	ENSCANG00000041469	RANBP2	99	50.535	Colobus_angolensis_palliatus
ENSPREG00000013331	si:ch1073-55a19.2	98	68.338	ENSCGRG00001000642	Ranbp2	98	68.338	Cricetulus_griseus_chok1gshd
ENSPREG00000013331	si:ch1073-55a19.2	98	68.338	ENSCGRG00000008995	Ranbp2	98	68.338	Cricetulus_griseus_crigri
ENSPREG00000013331	si:ch1073-55a19.2	98	81.462	ENSCSEG00000013280	si:ch1073-55a19.2	98	81.462	Cynoglossus_semilaevis
ENSPREG00000013331	si:ch1073-55a19.2	100	77.166	ENSCVAG00000016050	si:ch1073-55a19.2	99	87.792	Cyprinodon_variegatus
ENSPREG00000013331	si:ch1073-55a19.2	98	65.633	ENSDARG00000093125	RANBP2	97	66.150	Danio_rerio
ENSPREG00000013331	si:ch1073-55a19.2	99	52.667	ENSDNOG00000040501	RANBP2	99	55.319	Dasypus_novemcinctus
ENSPREG00000013331	si:ch1073-55a19.2	100	49.904	ENSDORG00000002206	Ranbp2	100	52.726	Dipodomys_ordii
ENSPREG00000013331	si:ch1073-55a19.2	72	56.953	ENSETEG00000008891	-	66	56.711	Echinops_telfairi
ENSPREG00000013331	si:ch1073-55a19.2	99	55.890	ENSEBUG00000010057	si:ch1073-55a19.2	83	55.438	Eptatretus_burgeri
ENSPREG00000013331	si:ch1073-55a19.2	100	52.745	ENSEASG00005012918	RANBP2	100	55.319	Equus_asinus_asinus
ENSPREG00000013331	si:ch1073-55a19.2	100	52.912	ENSECAG00000008458	RANBP2	81	51.607	Equus_caballus
ENSPREG00000013331	si:ch1073-55a19.2	80	65.888	ENSEEUG00000007806	RANBP2	78	65.888	Erinaceus_europaeus
ENSPREG00000013331	si:ch1073-55a19.2	99	77.436	ENSELUG00000007763	si:ch1073-55a19.2	93	79.284	Esox_lucius
ENSPREG00000013331	si:ch1073-55a19.2	99	49.588	ENSFALG00000003519	RANBP2	99	49.293	Ficedula_albicollis
ENSPREG00000013331	si:ch1073-55a19.2	100	49.130	ENSFDAG00000016912	RANBP2	100	54.422	Fukomys_damarensis
ENSPREG00000013331	si:ch1073-55a19.2	99	88.743	ENSFHEG00000009774	si:ch1073-55a19.2	98	88.743	Fundulus_heteroclitus
ENSPREG00000013331	si:ch1073-55a19.2	99	74.534	ENSGMOG00000007071	si:ch1073-55a19.2	94	74.534	Gadus_morhua
ENSPREG00000013331	si:ch1073-55a19.2	99	96.021	ENSGAFG00000010966	si:ch1073-55a19.2	98	96.021	Gambusia_affinis
ENSPREG00000013331	si:ch1073-55a19.2	98	82.461	ENSGACG00000006831	si:ch1073-55a19.2	100	66.171	Gasterosteus_aculeatus
ENSPREG00000013331	si:ch1073-55a19.2	94	49.774	ENSGAGG00000025039	RANBP2	99	49.934	Gopherus_agassizii
ENSPREG00000013331	si:ch1073-55a19.2	100	71.522	ENSHBUG00000000053	si:ch1073-55a19.2	99	83.290	Haplochromis_burtoni
ENSPREG00000013331	si:ch1073-55a19.2	100	51.722	ENSHGLG00000018887	RANBP2	100	51.778	Heterocephalus_glaber_female
ENSPREG00000013331	si:ch1073-55a19.2	100	51.167	ENSHGLG00100007365	RANBP2	100	51.138	Heterocephalus_glaber_male
ENSPREG00000013331	si:ch1073-55a19.2	100	67.868	ENSHCOG00000019596	si:ch1073-55a19.2	97	77.749	Hippocampus_comes
ENSPREG00000013331	si:ch1073-55a19.2	100	56.341	ENSIPUG00000019614	si:ch1073-55a19.2	99	57.587	Ictalurus_punctatus
ENSPREG00000013331	si:ch1073-55a19.2	100	48.742	ENSSTOG00000019518	RANBP2	100	55.102	Ictidomys_tridecemlineatus
ENSPREG00000013331	si:ch1073-55a19.2	100	50.000	ENSJJAG00000021292	Ranbp2	100	50.000	Jaculus_jaculus
ENSPREG00000013331	si:ch1073-55a19.2	99	81.890	ENSKMAG00000001158	si:ch1073-55a19.2	97	81.890	Kryptolebias_marmoratus
ENSPREG00000013331	si:ch1073-55a19.2	94	69.903	ENSLBEG00000027979	si:ch1073-55a19.2	97	77.073	Labrus_bergylta
ENSPREG00000013331	si:ch1073-55a19.2	100	52.878	ENSLACG00000009728	RANBP2	98	64.872	Latimeria_chalumnae
ENSPREG00000013331	si:ch1073-55a19.2	99	60.267	ENSLOCG00000010333	si:ch1073-55a19.2	97	60.134	Lepisosteus_oculatus
ENSPREG00000013331	si:ch1073-55a19.2	100	49.635	ENSLAFG00000000740	RANBP2	100	56.738	Loxodonta_africana
ENSPREG00000013331	si:ch1073-55a19.2	100	52.597	ENSMFAG00000029029	RANBP2	99	52.000	Macaca_fascicularis
ENSPREG00000013331	si:ch1073-55a19.2	100	52.597	ENSMMUG00000021019	RANBP2	99	52.000	Macaca_mulatta
ENSPREG00000013331	si:ch1073-55a19.2	100	52.537	ENSMNEG00000043706	RANBP2	99	51.940	Macaca_nemestrina
ENSPREG00000013331	si:ch1073-55a19.2	98	67.179	ENSMLEG00000037350	RANBP2	99	51.940	Mandrillus_leucophaeus
ENSPREG00000013331	si:ch1073-55a19.2	100	72.615	ENSMAMG00000017900	si:ch1073-55a19.2	99	82.199	Mastacembelus_armatus
ENSPREG00000013331	si:ch1073-55a19.2	100	71.592	ENSMZEG00005010956	si:ch1073-55a19.2	99	83.029	Maylandia_zebra
ENSPREG00000013331	si:ch1073-55a19.2	99	47.991	ENSMGAG00000014831	-	99	46.760	Meleagris_gallopavo
ENSPREG00000013331	si:ch1073-55a19.2	100	51.781	ENSMAUG00000013313	Ranbp2	100	51.786	Mesocricetus_auratus
ENSPREG00000013331	si:ch1073-55a19.2	100	51.710	ENSMICG00000011864	RANBP2	100	52.616	Microcebus_murinus
ENSPREG00000013331	si:ch1073-55a19.2	100	55.191	ENSMOCG00000012516	Ranbp2	98	68.602	Microtus_ochrogaster
ENSPREG00000013331	si:ch1073-55a19.2	100	71.879	ENSMMOG00000005743	si:ch1073-55a19.2	100	70.318	Mola_mola
ENSPREG00000013331	si:ch1073-55a19.2	95	67.282	ENSMODG00000002914	RANBP2	96	69.129	Monodelphis_domestica
ENSPREG00000013331	si:ch1073-55a19.2	98	82.759	ENSMALG00000004359	si:ch1073-55a19.2	100	71.899	Monopterus_albus
ENSPREG00000013331	si:ch1073-55a19.2	100	49.519	ENSMUSG00000003226	Ranbp2	100	57.143	Mus_musculus
ENSPREG00000013331	si:ch1073-55a19.2	100	49.168	MGP_PahariEiJ_G0030751	Ranbp2	100	51.146	Mus_pahari
ENSPREG00000013331	si:ch1073-55a19.2	100	49.343	MGP_SPRETEiJ_G0016147	Ranbp2	100	56.429	Mus_spretus
ENSPREG00000013331	si:ch1073-55a19.2	100	49.039	ENSMPUG00000010754	RANBP2	100	48.572	Mustela_putorius_furo
ENSPREG00000013331	si:ch1073-55a19.2	99	53.061	ENSMLUG00000005555	RANBP2	100	55.102	Myotis_lucifugus
ENSPREG00000013331	si:ch1073-55a19.2	100	55.319	ENSNGAG00000016154	Ranbp2	100	55.319	Nannospalax_galili
ENSPREG00000013331	si:ch1073-55a19.2	100	71.536	ENSNBRG00000004587	si:ch1073-55a19.2	100	71.926	Neolamprologus_brichardi
ENSPREG00000013331	si:ch1073-55a19.2	98	65.039	ENSNLEG00000007501	RANBP2	99	51.937	Nomascus_leucogenys
ENSPREG00000013331	si:ch1073-55a19.2	91	49.595	ENSOPRG00000009720	-	94	54.610	Ochotona_princeps
ENSPREG00000013331	si:ch1073-55a19.2	100	52.647	ENSODEG00000013212	RANBP2	100	53.901	Octodon_degus
ENSPREG00000013331	si:ch1073-55a19.2	100	69.211	ENSONIG00000004346	si:ch1073-55a19.2	100	71.157	Oreochromis_niloticus
ENSPREG00000013331	si:ch1073-55a19.2	79	54.628	ENSOANG00000004894	RANBP2	100	51.552	Ornithorhynchus_anatinus
ENSPREG00000013331	si:ch1073-55a19.2	99	67.442	ENSOCUG00000001165	RANBP2	98	67.442	Oryctolagus_cuniculus
ENSPREG00000013331	si:ch1073-55a19.2	100	69.398	ENSORLG00000015523	si:ch1073-55a19.2	100	69.898	Oryzias_latipes
ENSPREG00000013331	si:ch1073-55a19.2	100	69.642	ENSORLG00020003797	si:ch1073-55a19.2	100	69.987	Oryzias_latipes_hni
ENSPREG00000013331	si:ch1073-55a19.2	99	81.675	ENSORLG00015004994	si:ch1073-55a19.2	100	68.920	Oryzias_latipes_hsok
ENSPREG00000013331	si:ch1073-55a19.2	99	81.723	ENSOMEG00000022969	si:ch1073-55a19.2	97	81.723	Oryzias_melastigma
ENSPREG00000013331	si:ch1073-55a19.2	100	55.319	ENSOGAG00000028976	RANBP2	100	55.319	Otolemur_garnettii
ENSPREG00000013331	si:ch1073-55a19.2	99	49.386	ENSOARG00000000558	RANBP2	99	49.046	Ovis_aries
ENSPREG00000013331	si:ch1073-55a19.2	99	53.046	ENSPANG00000000990	RANBP2	99	49.432	Papio_anubis
ENSPREG00000013331	si:ch1073-55a19.2	94	52.730	ENSPKIG00000021054	-	96	63.636	Paramormyrops_kingsleyae
ENSPREG00000013331	si:ch1073-55a19.2	100	60.529	ENSPKIG00000010971	RANBP2	100	60.746	Paramormyrops_kingsleyae
ENSPREG00000013331	si:ch1073-55a19.2	99	50.618	ENSPSIG00000007182	RANBP2	99	49.984	Pelodiscus_sinensis
ENSPREG00000013331	si:ch1073-55a19.2	98	51.555	ENSPEMG00000021565	Ranbp2	99	52.043	Peromyscus_maniculatus_bairdii
ENSPREG00000013331	si:ch1073-55a19.2	86	56.081	ENSPMAG00000007195	si:ch1073-55a19.2	100	59.854	Petromyzon_marinus
ENSPREG00000013331	si:ch1073-55a19.2	100	54.135	ENSPCIG00000013912	RANBP2	86	67.810	Phascolarctos_cinereus
ENSPREG00000013331	si:ch1073-55a19.2	99	98.143	ENSPFOG00000007377	si:ch1073-55a19.2	99	98.143	Poecilia_formosa
ENSPREG00000013331	si:ch1073-55a19.2	99	97.347	ENSPLAG00000012373	si:ch1073-55a19.2	99	97.347	Poecilia_latipinna
ENSPREG00000013331	si:ch1073-55a19.2	99	98.408	ENSPMEG00000005561	si:ch1073-55a19.2	99	98.408	Poecilia_mexicana
ENSPREG00000013331	si:ch1073-55a19.2	69	66.923	ENSPPYG00000012139	-	100	52.250	Pongo_abelii
ENSPREG00000013331	si:ch1073-55a19.2	54	57.277	ENSPPYG00000029793	-	99	57.886	Pongo_abelii
ENSPREG00000013331	si:ch1073-55a19.2	96	66.456	ENSPCAG00000000957	RANBP2	98	66.456	Procavia_capensis
ENSPREG00000013331	si:ch1073-55a19.2	100	55.970	ENSPCOG00000008879	RANBP2	100	55.319	Propithecus_coquereli
ENSPREG00000013331	si:ch1073-55a19.2	99	58.182	ENSPVAG00000003883	RANBP2	90	67.183	Pteropus_vampyrus
ENSPREG00000013331	si:ch1073-55a19.2	100	71.522	ENSPNYG00000015971	si:ch1073-55a19.2	99	83.290	Pundamilia_nyererei
ENSPREG00000013331	si:ch1073-55a19.2	100	61.782	ENSPNAG00000026129	si:ch1073-55a19.2	100	61.332	Pygocentrus_nattereri
ENSPREG00000013331	si:ch1073-55a19.2	100	51.282	ENSRNOG00000000796	Ranbp2	100	50.660	Rattus_norvegicus
ENSPREG00000013331	si:ch1073-55a19.2	99	67.179	ENSRBIG00000043515	RANBP2	99	51.506	Rhinopithecus_bieti
ENSPREG00000013331	si:ch1073-55a19.2	99	67.179	ENSRROG00000026113	RANBP2	100	56.219	Rhinopithecus_roxellana
ENSPREG00000013331	si:ch1073-55a19.2	99	67.436	ENSSBOG00000035336	RANBP2	98	67.436	Saimiri_boliviensis_boliviensis
ENSPREG00000013331	si:ch1073-55a19.2	99	52.837	ENSSHAG00000004676	RANBP2	59	68.074	Sarcophilus_harrisii
ENSPREG00000013331	si:ch1073-55a19.2	99	62.279	ENSSFOG00015003943	-	99	61.978	Scleropages_formosus
ENSPREG00000013331	si:ch1073-55a19.2	100	57.622	ENSSFOG00015023201	RANBP2	96	71.129	Scleropages_formosus
ENSPREG00000013331	si:ch1073-55a19.2	100	71.007	ENSSMAG00000007331	si:ch1073-55a19.2	97	82.940	Scophthalmus_maximus
ENSPREG00000013331	si:ch1073-55a19.2	100	72.588	ENSSDUG00000013160	si:ch1073-55a19.2	100	74.194	Seriola_dumerili
ENSPREG00000013331	si:ch1073-55a19.2	100	73.512	ENSSLDG00000023392	si:ch1073-55a19.2	100	73.279	Seriola_lalandi_dorsalis
ENSPREG00000013331	si:ch1073-55a19.2	87	67.526	ENSSARG00000005595	RANBP2	70	67.526	Sorex_araneus
ENSPREG00000013331	si:ch1073-55a19.2	100	73.383	ENSSPAG00000008000	si:ch1073-55a19.2	97	83.641	Stegastes_partitus
ENSPREG00000013331	si:ch1073-55a19.2	100	52.285	ENSSSCG00000008136	RANBP2	98	51.988	Sus_scrofa
ENSPREG00000013331	si:ch1073-55a19.2	58	66.138	ENSTGUG00000009571	RANBP2	57	55.000	Taeniopygia_guttata
ENSPREG00000013331	si:ch1073-55a19.2	94	66.925	ENSTTRG00000007400	RANBP2	92	66.925	Tursiops_truncatus
ENSPREG00000013331	si:ch1073-55a19.2	93	56.391	ENSUAMG00000020025	RANBP2	99	55.714	Ursus_americanus
ENSPREG00000013331	si:ch1073-55a19.2	96	67.282	ENSVPAG00000006676	RANBP2	91	67.282	Vicugna_pacos
ENSPREG00000013331	si:ch1073-55a19.2	98	55.556	ENSVVUG00000014899	RANBP2	98	54.726	Vulpes_vulpes
ENSPREG00000013331	si:ch1073-55a19.2	94	48.737	ENSXETG00000016006	ranbp2	99	48.434	Xenopus_tropicalis
ENSPREG00000013331	si:ch1073-55a19.2	99	86.818	ENSXCOG00000000752	si:ch1073-55a19.2	99	84.832	Xiphophorus_couchianus
ENSPREG00000013331	si:ch1073-55a19.2	100	88.635	ENSXMAG00000003519	si:ch1073-55a19.2	100	87.236	Xiphophorus_maculatus