EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000013383 (Gene tree)
Gene ID: 103470725
Gene Symbol: grsf1
Alias: wu:fb62c04|zgc:153305
Full Name: G-rich sequence factor 1-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 8128 bases
Position: chrLG9:31680123-31688250
Accession: 103470725
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000019757	RRM_1	PF00076.22	6.6e-23	1	2
ENSPREP00000019757	RRM_1	PF00076.22	6.6e-23	2	2
ENSPREP00000019767	RRM_1	PF00076.22	4.7e-19	1	2
ENSPREP00000019767	RRM_1	PF00076.22	4.7e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000019969	-	1221	XM_008419354	ENSPREP00000019757	404 (aa)	XP_008417576	UPI0004A37289
ENSPRET00000019979	-	1248	-	ENSPREP00000019767	415 (aa)	-	-

Gene Model

Click here to download ENSPREG00000013383's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000013383's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000013383	grsf1	76	30.332	ENSPREG00000002991	esrp2	51	30.332
ENSPREG00000013383	grsf1	77	55.696	ENSPREG00000009812	HNRNPH3	67	55.696
ENSPREG00000013383	grsf1	76	41.411	ENSPREG00000005780	hnrnph1	83	39.873

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000013383	grsf1	99	62.044	ENSAPOG00000012487	grsf1	99	62.044	Acanthochromis_polyacanthus
ENSPREG00000013383	grsf1	99	61.520	ENSACIG00000005871	grsf1	99	61.765	Amphilophus_citrinellus
ENSPREG00000013383	grsf1	99	64.532	ENSAOCG00000017462	-	99	64.532	Amphiprion_ocellaris
ENSPREG00000013383	grsf1	99	64.477	ENSAPEG00000007240	-	99	64.477	Amphiprion_percula
ENSPREG00000013383	grsf1	99	61.330	ENSATEG00000007185	grsf1	99	60.837	Anabas_testudineus
ENSPREG00000013383	grsf1	99	63.171	ENSACLG00000003685	-	99	62.683	Astatotilapia_calliptera
ENSPREG00000013383	grsf1	85	46.440	ENSAMXG00000012270	grsf1	98	46.440	Astyanax_mexicanus
ENSPREG00000013383	grsf1	99	53.468	ENSCSEG00000019209	-	99	54.819	Cynoglossus_semilaevis
ENSPREG00000013383	grsf1	99	71.111	ENSCVAG00000004476	grsf1	99	70.617	Cyprinodon_variegatus
ENSPREG00000013383	grsf1	98	43.176	ENSDARG00000053021	grsf1	93	43.210	Danio_rerio
ENSPREG00000013383	grsf1	99	59.124	ENSFHEG00000013358	-	99	59.367	Fundulus_heteroclitus
ENSPREG00000013383	grsf1	75	72.727	ENSGMOG00000014047	grsf1	82	72.727	Gadus_morhua
ENSPREG00000013383	grsf1	100	91.089	ENSGAFG00000004496	grsf1	100	90.842	Gambusia_affinis
ENSPREG00000013383	grsf1	76	57.958	ENSGACG00000014447	grsf1	99	57.958	Gasterosteus_aculeatus
ENSPREG00000013383	grsf1	99	62.195	ENSHBUG00000006284	grsf1	99	62.439	Haplochromis_burtoni
ENSPREG00000013383	grsf1	99	55.610	ENSHCOG00000007715	-	99	55.693	Hippocampus_comes
ENSPREG00000013383	grsf1	80	50.926	ENSIPUG00000010533	grsf1	80	50.926	Ictalurus_punctatus
ENSPREG00000013383	grsf1	99	57.710	ENSKMAG00000004528	grsf1	99	57.477	Kryptolebias_marmoratus
ENSPREG00000013383	grsf1	78	51.090	ENSLBEG00000018100	grsf1	98	51.090	Labrus_bergylta
ENSPREG00000013383	grsf1	99	62.654	ENSMAMG00000002627	grsf1	99	62.095	Mastacembelus_armatus
ENSPREG00000013383	grsf1	99	63.171	ENSMZEG00005020633	-	99	62.683	Maylandia_zebra
ENSPREG00000013383	grsf1	95	59.737	ENSMMOG00000014231	grsf1	99	59.694	Mola_mola
ENSPREG00000013383	grsf1	99	59.012	ENSMALG00000000251	grsf1	99	59.413	Monopterus_albus
ENSPREG00000013383	grsf1	99	61.425	ENSNBRG00000017774	grsf1	96	60.934	Neolamprologus_brichardi
ENSPREG00000013383	grsf1	99	63.260	ENSONIG00000014119	grsf1	99	62.774	Oreochromis_niloticus
ENSPREG00000013383	grsf1	99	57.750	ENSORLG00000030211	grsf1	98	58.000	Oryzias_latipes
ENSPREG00000013383	grsf1	81	65.337	ENSORLG00020014383	grsf1	90	61.773	Oryzias_latipes_hni
ENSPREG00000013383	grsf1	99	57.500	ENSORLG00015006520	grsf1	98	57.750	Oryzias_latipes_hsok
ENSPREG00000013383	grsf1	83	65.476	ENSOMEG00000009181	grsf1	85	66.272	Oryzias_melastigma
ENSPREG00000013383	grsf1	82	52.493	ENSPKIG00000019432	grsf1	95	47.772	Paramormyrops_kingsleyae
ENSPREG00000013383	grsf1	83	59.767	ENSPMGG00000013654	grsf1	93	59.767	Periophthalmus_magnuspinnatus
ENSPREG00000013383	grsf1	100	96.552	ENSPFOG00000006122	grsf1	100	96.552	Poecilia_formosa
ENSPREG00000013383	grsf1	100	96.782	ENSPLAG00000020977	grsf1	100	96.782	Poecilia_latipinna
ENSPREG00000013383	grsf1	100	97.291	ENSPMEG00000012485	grsf1	100	97.291	Poecilia_mexicana
ENSPREG00000013383	grsf1	99	63.171	ENSPNYG00000005379	grsf1	99	62.683	Pundamilia_nyererei
ENSPREG00000013383	grsf1	83	51.471	ENSPNAG00000014912	grsf1	81	50.882	Pygocentrus_nattereri
ENSPREG00000013383	grsf1	82	43.881	ENSSFOG00015014620	grsf1	83	45.357	Scleropages_formosus
ENSPREG00000013383	grsf1	81	60.123	ENSSMAG00000014181	grsf1	69	60.123	Scophthalmus_maximus
ENSPREG00000013383	grsf1	99	59.057	ENSSDUG00000009397	-	98	62.229	Seriola_dumerili
ENSPREG00000013383	grsf1	99	58.911	ENSSLDG00000025494	grsf1	99	58.911	Seriola_lalandi_dorsalis
ENSPREG00000013383	grsf1	99	63.171	ENSSPAG00000023296	grsf1	99	62.592	Stegastes_partitus
ENSPREG00000013383	grsf1	97	56.853	ENSTRUG00000015354	grsf1	99	56.404	Takifugu_rubripes
ENSPREG00000013383	grsf1	82	56.211	ENSTNIG00000015350	-	99	56.211	Tetraodon_nigroviridis
ENSPREG00000013383	grsf1	99	89.578	ENSXMAG00000029710	grsf1	99	89.330	Xiphophorus_maculatus