EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000013510 (Gene tree)
Gene ID: 103474985
Gene Symbol: scaf4b
Alias: -
Full Name: splicing factor%2C arginine/serine-rich 15-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 24412 bases
Position: chrLG13:27162656-27187067
Accession: 103474985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000019965	RRM_1	PF00076.22	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000020177	-	2301	XM_008426329	ENSPREP00000019965	766 (aa)	XP_008424551	UPI0004A46C02

Gene Model

Click here to download ENSPREG00000013510's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000013510's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000013510	scaf4b	100	68.726	ENSAPOG00000019615	scaf4b	100	68.726	Acanthochromis_polyacanthus
ENSPREG00000013510	scaf4b	100	69.659	ENSAOCG00000010433	scaf4b	100	69.659	Amphiprion_ocellaris
ENSPREG00000013510	scaf4b	57	58.937	ENSAOCG00000000615	scaf4a	57	58.088	Amphiprion_ocellaris
ENSPREG00000013510	scaf4b	57	58.454	ENSAPEG00000021229	scaf4a	57	58.088	Amphiprion_percula
ENSPREG00000013510	scaf4b	100	69.406	ENSAPEG00000010913	scaf4b	100	69.406	Amphiprion_percula
ENSPREG00000013510	scaf4b	98	62.868	ENSATEG00000011758	scaf4b	100	63.555	Anabas_testudineus
ENSPREG00000013510	scaf4b	100	66.456	ENSACLG00000024833	scaf4b	100	65.443	Astatotilapia_calliptera
ENSPREG00000013510	scaf4b	73	56.940	ENSAMXG00000008585	scaf4a	59	58.696	Astyanax_mexicanus
ENSPREG00000013510	scaf4b	54	71.975	ENSCJAG00000008993	SCAF4	58	62.736	Callithrix_jacchus
ENSPREG00000013510	scaf4b	57	66.837	ENSCAFG00000008863	SCAF4	53	55.515	Canis_familiaris
ENSPREG00000013510	scaf4b	52	71.975	ENSCAFG00020026019	SCAF4	70	54.579	Canis_lupus_dingo
ENSPREG00000013510	scaf4b	100	56.527	ENSCSEG00000012808	-	99	57.795	Cynoglossus_semilaevis
ENSPREG00000013510	scaf4b	100	73.198	ENSCVAG00000009142	scaf4b	100	73.325	Cyprinodon_variegatus
ENSPREG00000013510	scaf4b	52	67.320	ENSDARG00000018854	scaf4b	59	66.667	Danio_rerio
ENSPREG00000013510	scaf4b	59	48.754	ENSEBUG00000003891	SCAF8	53	49.225	Eptatretus_burgeri
ENSPREG00000013510	scaf4b	58	66.837	ENSFCAG00000002228	SCAF4	53	56.429	Felis_catus
ENSPREG00000013510	scaf4b	100	77.735	ENSFHEG00000007634	scaf4b	100	77.863	Fundulus_heteroclitus
ENSPREG00000013510	scaf4b	52	66.443	ENSGMOG00000015188	scaf4a	55	57.977	Gadus_morhua
ENSPREG00000013510	scaf4b	58	60.541	ENSGAFG00000019460	scaf4a	66	52.812	Gambusia_affinis
ENSPREG00000013510	scaf4b	53	64.375	ENSGACG00000020580	scaf4a	50	57.519	Gasterosteus_aculeatus
ENSPREG00000013510	scaf4b	53	71.975	ENSGGOG00000015557	SCAF4	57	56.475	Gorilla_gorilla
ENSPREG00000013510	scaf4b	58	66.837	ENSHGLG00000010582	SCAF4	55	55.914	Heterocephalus_glaber_female
ENSPREG00000013510	scaf4b	57	66.837	ENSHGLG00100009441	SCAF4	54	54.717	Heterocephalus_glaber_male
ENSPREG00000013510	scaf4b	52	72.611	ENSJJAG00000019447	Scaf4	61	51.737	Jaculus_jaculus
ENSPREG00000013510	scaf4b	100	70.253	ENSKMAG00000005742	scaf4b	100	70.380	Kryptolebias_marmoratus
ENSPREG00000013510	scaf4b	79	51.220	ENSLOCG00000009162	scaf4a	51	63.594	Lepisosteus_oculatus
ENSPREG00000013510	scaf4b	57	60.638	ENSMALG00000013825	scaf4a	61	58.491	Monopterus_albus
ENSPREG00000013510	scaf4b	58	66.837	ENSMPUG00000001078	SCAF4	53	55.311	Mustela_putorius_furo
ENSPREG00000013510	scaf4b	51	70.629	ENSONIG00000004687	scaf4a	63	57.455	Oreochromis_niloticus
ENSPREG00000013510	scaf4b	69	69.318	ENSONIG00000005610	scaf4b	99	58.814	Oreochromis_niloticus
ENSPREG00000013510	scaf4b	100	60.076	ENSORLG00000003420	scaf4b	100	60.787	Oryzias_latipes
ENSPREG00000013510	scaf4b	100	60.380	ENSORLG00020013853	scaf4b	100	61.090	Oryzias_latipes_hni
ENSPREG00000013510	scaf4b	57	66.837	ENSPPRG00000000635	SCAF4	53	55.515	Panthera_pardus
ENSPREG00000013510	scaf4b	52	71.975	ENSPTIG00000021578	SCAF4	54	55.515	Panthera_tigris_altaica
ENSPREG00000013510	scaf4b	56	64.615	ENSPKIG00000022408	scaf4a	71	61.818	Paramormyrops_kingsleyae
ENSPREG00000013510	scaf4b	52	57.432	ENSPMAG00000006192	SCAF8	72	53.818	Petromyzon_marinus
ENSPREG00000013510	scaf4b	52	70.886	ENSPCIG00000028183	SCAF4	68	51.645	Phascolarctos_cinereus
ENSPREG00000013510	scaf4b	55	58.919	ENSPFOG00000017156	scaf4a	67	56.184	Poecilia_formosa
ENSPREG00000013510	scaf4b	98	72.364	ENSPFOG00000003261	scaf4b	79	89.513	Poecilia_formosa
ENSPREG00000013510	scaf4b	55	60.541	ENSPLAG00000001972	scaf4a	68	56.584	Poecilia_latipinna
ENSPREG00000013510	scaf4b	100	94.661	ENSPLAG00000004403	-	100	94.661	Poecilia_latipinna
ENSPREG00000013510	scaf4b	100	95.573	ENSPMEG00000006666	-	100	95.573	Poecilia_mexicana
ENSPREG00000013510	scaf4b	100	66.582	ENSPNYG00000010526	scaf4b	100	65.570	Pundamilia_nyererei
ENSPREG00000013510	scaf4b	81	49.711	ENSPNAG00000016892	scaf4a	68	49.711	Pygocentrus_nattereri
ENSPREG00000013510	scaf4b	99	57.711	ENSPNAG00000015199	-	79	57.711	Pygocentrus_nattereri
ENSPREG00000013510	scaf4b	52	71.795	ENSSHAG00000001581	SCAF4	51	60.360	Sarcophilus_harrisii
ENSPREG00000013510	scaf4b	51	72.028	ENSSMAG00000017901	scaf4a	55	57.509	Scophthalmus_maximus
ENSPREG00000013510	scaf4b	100	65.245	ENSSMAG00000003738	scaf4b	100	64.492	Scophthalmus_maximus
ENSPREG00000013510	scaf4b	100	65.496	ENSSDUG00000012380	scaf4b	100	66.625	Seriola_dumerili
ENSPREG00000013510	scaf4b	100	65.496	ENSSLDG00000023152	-	100	66.625	Seriola_lalandi_dorsalis
ENSPREG00000013510	scaf4b	58	66.837	ENSSSCG00000021023	SCAF4	54	56.631	Sus_scrofa
ENSPREG00000013510	scaf4b	57	60.294	ENSTGUG00000013464	SCAF4	58	57.034	Taeniopygia_guttata
ENSPREG00000013510	scaf4b	99	54.707	ENSTRUG00000009536	-	99	54.765	Takifugu_rubripes
ENSPREG00000013510	scaf4b	51	73.103	ENSTNIG00000009945	scaf4a	51	56.506	Tetraodon_nigroviridis
ENSPREG00000013510	scaf4b	57	65.816	ENSTTRG00000010963	SCAF4	53	57.312	Tursiops_truncatus
ENSPREG00000013510	scaf4b	58	66.327	ENSUAMG00000008860	SCAF4	55	56.318	Ursus_americanus
ENSPREG00000013510	scaf4b	57	66.327	ENSUMAG00000016962	SCAF4	54	59.912	Ursus_maritimus
ENSPREG00000013510	scaf4b	57	66.837	ENSVVUG00000002953	SCAF4	53	55.515	Vulpes_vulpes
ENSPREG00000013510	scaf4b	65	55.417	ENSXETG00000007351	scaf4	61	54.000	Xenopus_tropicalis