EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000013802 (Gene tree)
Gene ID: 103471963
Gene Symbol: sf3a3
Alias: wu:fi15a06|wu:fj94f01|zgc:110227
Full Name: splicing factor 3a subunit 3
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 11184 bases
Position: chrLG11:1846515-1857698
Accession: 103471963
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000020409	SF3a60_bindingd	PF12108.8	1.4e-14	1	1
ENSPREP00000020434	SF3a60_bindingd	PF12108.8	1.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000020623	-	6239	XM_008421283	ENSPREP00000020409	501 (aa)	XP_008419505	UPI0004A4D2FA
ENSPRET00000020648	-	1509	-	ENSPREP00000020434	502 (aa)	-	-

Gene Model

Click here to download ENSPREG00000013802's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000013802's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000013802	sf3a3	100	90.020	ENSG00000183431	SF3A3	100	90.020	Homo_sapiens
ENSPREG00000013802	sf3a3	100	96.806	ENSAPOG00000015608	sf3a3	100	96.806	Acanthochromis_polyacanthus
ENSPREG00000013802	sf3a3	100	90.020	ENSAMEG00000001262	SF3A3	100	90.020	Ailuropoda_melanoleuca
ENSPREG00000013802	sf3a3	95	91.124	ENSACIG00000009061	sf3a3	99	91.124	Amphilophus_citrinellus
ENSPREG00000013802	sf3a3	100	97.006	ENSAOCG00000013954	sf3a3	100	97.006	Amphiprion_ocellaris
ENSPREG00000013802	sf3a3	100	97.006	ENSAPEG00000007297	sf3a3	100	97.006	Amphiprion_percula
ENSPREG00000013802	sf3a3	100	97.206	ENSATEG00000008754	sf3a3	100	97.206	Anabas_testudineus
ENSPREG00000013802	sf3a3	94	90.405	ENSAPLG00000014900	SF3A3	100	90.405	Anas_platyrhynchos
ENSPREG00000013802	sf3a3	100	89.022	ENSACAG00000017058	SF3A3	100	89.022	Anolis_carolinensis
ENSPREG00000013802	sf3a3	99	86.747	ENSANAG00000014878	SF3A3	100	86.747	Aotus_nancymaae
ENSPREG00000013802	sf3a3	100	69.860	ENSANAG00000036903	-	100	69.860	Aotus_nancymaae
ENSPREG00000013802	sf3a3	100	97.206	ENSACLG00000017977	sf3a3	100	97.206	Astatotilapia_calliptera
ENSPREG00000013802	sf3a3	100	93.413	ENSAMXG00000016855	sf3a3	87	93.413	Astyanax_mexicanus
ENSPREG00000013802	sf3a3	100	90.020	ENSBTAG00000007299	SF3A3	100	90.020	Bos_taurus
ENSPREG00000013802	sf3a3	100	52.087	WBGene00011758	T13H5.4	100	52.087	Caenorhabditis_elegans
ENSPREG00000013802	sf3a3	100	90.020	ENSCJAG00000002176	SF3A3	100	90.020	Callithrix_jacchus
ENSPREG00000013802	sf3a3	100	90.020	ENSCAFG00000003222	-	100	90.020	Canis_familiaris
ENSPREG00000013802	sf3a3	100	90.020	ENSCAFG00000000683	-	100	90.020	Canis_familiaris
ENSPREG00000013802	sf3a3	100	90.020	ENSCAFG00020006186	SF3A3	100	90.020	Canis_lupus_dingo
ENSPREG00000013802	sf3a3	100	90.020	ENSCHIG00000020638	SF3A3	100	90.020	Capra_hircus
ENSPREG00000013802	sf3a3	100	83.832	ENSTSYG00000008417	SF3A3	100	83.832	Carlito_syrichta
ENSPREG00000013802	sf3a3	85	58.810	ENSCAPG00000003466	SF3A3	100	56.064	Cavia_aperea
ENSPREG00000013802	sf3a3	100	90.220	ENSCPOG00000008660	SF3A3	100	90.220	Cavia_porcellus
ENSPREG00000013802	sf3a3	100	64.271	ENSCCAG00000034048	-	100	61.277	Cebus_capucinus
ENSPREG00000013802	sf3a3	100	90.020	ENSCCAG00000033732	SF3A3	100	90.020	Cebus_capucinus
ENSPREG00000013802	sf3a3	100	90.020	ENSCATG00000043496	SF3A3	100	90.020	Cercocebus_atys
ENSPREG00000013802	sf3a3	100	66.932	ENSCATG00000043537	-	100	67.530	Cercocebus_atys
ENSPREG00000013802	sf3a3	94	72.921	ENSCATG00000041660	-	100	74.414	Cercocebus_atys
ENSPREG00000013802	sf3a3	100	90.020	ENSCLAG00000010838	SF3A3	100	90.020	Chinchilla_lanigera
ENSPREG00000013802	sf3a3	95	89.706	ENSCSAG00000001120	SF3A3	100	89.706	Chlorocebus_sabaeus
ENSPREG00000013802	sf3a3	80	85.185	ENSCHOG00000006849	SF3A3	71	94.483	Choloepus_hoffmanni
ENSPREG00000013802	sf3a3	60	71.000	ENSCPBG00000007472	-	79	71.000	Chrysemys_picta_bellii
ENSPREG00000013802	sf3a3	100	82.834	ENSCPBG00000018291	-	100	82.834	Chrysemys_picta_bellii
ENSPREG00000013802	sf3a3	100	67.530	ENSCING00000002730	-	100	67.530	Ciona_intestinalis
ENSPREG00000013802	sf3a3	100	66.068	ENSCSAVG00000005063	-	100	66.068	Ciona_savignyi
ENSPREG00000013802	sf3a3	100	90.020	ENSCANG00000042083	SF3A3	100	90.020	Colobus_angolensis_palliatus
ENSPREG00000013802	sf3a3	100	64.671	ENSCANG00000035535	-	100	64.671	Colobus_angolensis_palliatus
ENSPREG00000013802	sf3a3	100	90.220	ENSCGRG00001011320	Sf3a3	100	90.220	Cricetulus_griseus_chok1gshd
ENSPREG00000013802	sf3a3	100	90.220	ENSCGRG00000012156	Sf3a3	100	90.220	Cricetulus_griseus_crigri
ENSPREG00000013802	sf3a3	100	94.810	ENSCSEG00000010401	sf3a3	100	94.810	Cynoglossus_semilaevis
ENSPREG00000013802	sf3a3	94	97.868	ENSCVAG00000010239	sf3a3	95	97.868	Cyprinodon_variegatus
ENSPREG00000013802	sf3a3	100	92.615	ENSDARG00000100114	sf3a3	100	93.556	Danio_rerio
ENSPREG00000013802	sf3a3	91	89.934	ENSDNOG00000046628	SF3A3	99	89.934	Dasypus_novemcinctus
ENSPREG00000013802	sf3a3	100	90.220	ENSDORG00000008798	Sf3a3	100	90.220	Dipodomys_ordii
ENSPREG00000013802	sf3a3	100	64.229	FBgn0014366	noi	100	64.032	Drosophila_melanogaster
ENSPREG00000013802	sf3a3	100	78.330	ENSEBUG00000015411	sf3a3	92	78.728	Eptatretus_burgeri
ENSPREG00000013802	sf3a3	100	90.020	ENSEASG00005012906	SF3A3	100	90.020	Equus_asinus_asinus
ENSPREG00000013802	sf3a3	100	90.020	ENSECAG00000017333	SF3A3	100	90.020	Equus_caballus
ENSPREG00000013802	sf3a3	100	92.216	ENSELUG00000010024	sf3a3	100	92.216	Esox_lucius
ENSPREG00000013802	sf3a3	100	90.020	ENSFCAG00000027772	SF3A3	100	90.020	Felis_catus
ENSPREG00000013802	sf3a3	100	90.220	ENSFALG00000001003	SF3A3	100	90.220	Ficedula_albicollis
ENSPREG00000013802	sf3a3	100	90.220	ENSFDAG00000020908	SF3A3	100	90.220	Fukomys_damarensis
ENSPREG00000013802	sf3a3	100	97.804	ENSFHEG00000019107	sf3a3	100	97.804	Fundulus_heteroclitus
ENSPREG00000013802	sf3a3	100	91.816	ENSGMOG00000015540	sf3a3	100	91.816	Gadus_morhua
ENSPREG00000013802	sf3a3	100	90.020	ENSGALG00000001540	SF3A3	100	90.020	Gallus_gallus
ENSPREG00000013802	sf3a3	100	99.601	ENSGAFG00000002320	sf3a3	100	99.601	Gambusia_affinis
ENSPREG00000013802	sf3a3	100	95.808	ENSGACG00000007842	sf3a3	100	95.808	Gasterosteus_aculeatus
ENSPREG00000013802	sf3a3	100	90.020	ENSGAGG00000014980	SF3A3	100	90.020	Gopherus_agassizii
ENSPREG00000013802	sf3a3	100	69.661	ENSGGOG00000022611	-	100	69.261	Gorilla_gorilla
ENSPREG00000013802	sf3a3	100	90.020	ENSGGOG00000013928	SF3A3	100	90.020	Gorilla_gorilla
ENSPREG00000013802	sf3a3	100	97.206	ENSHBUG00000018158	sf3a3	100	97.368	Haplochromis_burtoni
ENSPREG00000013802	sf3a3	100	90.220	ENSHGLG00000012502	SF3A3	100	90.220	Heterocephalus_glaber_female
ENSPREG00000013802	sf3a3	100	90.220	ENSHGLG00100010546	SF3A3	100	90.220	Heterocephalus_glaber_male
ENSPREG00000013802	sf3a3	100	94.212	ENSHCOG00000015109	sf3a3	100	94.212	Hippocampus_comes
ENSPREG00000013802	sf3a3	100	92.216	ENSIPUG00000011603	sf3a3	100	92.216	Ictalurus_punctatus
ENSPREG00000013802	sf3a3	100	90.020	ENSSTOG00000001691	SF3A3	100	90.020	Ictidomys_tridecemlineatus
ENSPREG00000013802	sf3a3	100	90.419	ENSJJAG00000012404	Sf3a3	100	90.419	Jaculus_jaculus
ENSPREG00000013802	sf3a3	100	97.804	ENSKMAG00000007632	sf3a3	100	97.804	Kryptolebias_marmoratus
ENSPREG00000013802	sf3a3	100	87.251	ENSLBEG00000000816	sf3a3	100	87.251	Labrus_bergylta
ENSPREG00000013802	sf3a3	100	92.814	ENSLOCG00000003273	sf3a3	100	92.814	Lepisosteus_oculatus
ENSPREG00000013802	sf3a3	100	78.643	ENSLAFG00000008094	SF3A3	100	78.643	Loxodonta_africana
ENSPREG00000013802	sf3a3	94	72.495	ENSMFAG00000036706	-	100	74.200	Macaca_fascicularis
ENSPREG00000013802	sf3a3	100	90.020	ENSMFAG00000043047	SF3A3	100	90.020	Macaca_fascicularis
ENSPREG00000013802	sf3a3	100	90.020	ENSMMUG00000023199	SF3A3	100	90.020	Macaca_mulatta
ENSPREG00000013802	sf3a3	100	71.116	ENSMMUG00000038820	-	100	72.709	Macaca_mulatta
ENSPREG00000013802	sf3a3	94	69.936	ENSMNEG00000028686	-	100	71.642	Macaca_nemestrina
ENSPREG00000013802	sf3a3	100	90.020	ENSMNEG00000044291	SF3A3	100	90.020	Macaca_nemestrina
ENSPREG00000013802	sf3a3	100	90.020	ENSMLEG00000030641	SF3A3	100	90.020	Mandrillus_leucophaeus
ENSPREG00000013802	sf3a3	100	74.451	ENSMLEG00000036714	-	100	75.848	Mandrillus_leucophaeus
ENSPREG00000013802	sf3a3	100	66.135	ENSMLEG00000028631	-	100	66.733	Mandrillus_leucophaeus
ENSPREG00000013802	sf3a3	100	96.407	ENSMAMG00000001942	sf3a3	100	96.407	Mastacembelus_armatus
ENSPREG00000013802	sf3a3	100	97.206	ENSMZEG00005016987	sf3a3	100	97.206	Maylandia_zebra
ENSPREG00000013802	sf3a3	100	85.686	ENSMGAG00000002875	SF3A3	100	85.686	Meleagris_gallopavo
ENSPREG00000013802	sf3a3	100	86.028	ENSMICG00000001485	-	100	86.028	Microcebus_murinus
ENSPREG00000013802	sf3a3	100	84.431	ENSMICG00000043548	-	100	84.431	Microcebus_murinus
ENSPREG00000013802	sf3a3	91	87.336	ENSMICG00000026541	-	100	87.336	Microcebus_murinus
ENSPREG00000013802	sf3a3	100	87.026	ENSMOCG00000019939	-	100	87.026	Microtus_ochrogaster
ENSPREG00000013802	sf3a3	95	84.211	ENSMOCG00000014565	-	97	82.947	Microtus_ochrogaster
ENSPREG00000013802	sf3a3	100	96.208	ENSMMOG00000014307	sf3a3	100	96.208	Mola_mola
ENSPREG00000013802	sf3a3	100	70.485	ENSMODG00000017729	-	100	69.498	Monodelphis_domestica
ENSPREG00000013802	sf3a3	100	83.034	ENSMODG00000024045	-	100	83.034	Monodelphis_domestica
ENSPREG00000013802	sf3a3	100	96.407	ENSMALG00000004836	sf3a3	100	96.711	Monopterus_albus
ENSPREG00000013802	sf3a3	100	90.220	MGP_CAROLIEiJ_G0026449	Sf3a3	100	90.220	Mus_caroli
ENSPREG00000013802	sf3a3	100	90.220	ENSMUSG00000028902	Sf3a3	100	90.220	Mus_musculus
ENSPREG00000013802	sf3a3	100	85.230	MGP_PahariEiJ_G0028780	Sf3a3	100	85.230	Mus_pahari
ENSPREG00000013802	sf3a3	100	90.220	MGP_SPRETEiJ_G0027428	Sf3a3	100	90.220	Mus_spretus
ENSPREG00000013802	sf3a3	100	90.020	ENSMLUG00000000991	SF3A3	100	90.020	Myotis_lucifugus
ENSPREG00000013802	sf3a3	100	85.030	ENSNGAG00000018032	Sf3a3	100	85.030	Nannospalax_galili
ENSPREG00000013802	sf3a3	100	82.036	ENSNLEG00000011720	SF3A3	100	82.036	Nomascus_leucogenys
ENSPREG00000013802	sf3a3	100	90.220	ENSOPRG00000012785	SF3A3	100	90.220	Ochotona_princeps
ENSPREG00000013802	sf3a3	100	84.830	ENSODEG00000006854	-	100	87.425	Octodon_degus
ENSPREG00000013802	sf3a3	100	78.643	ENSODEG00000018393	-	100	78.443	Octodon_degus
ENSPREG00000013802	sf3a3	100	86.028	ENSODEG00000007470	-	100	86.028	Octodon_degus
ENSPREG00000013802	sf3a3	100	76.295	ENSODEG00000000937	-	100	78.685	Octodon_degus
ENSPREG00000013802	sf3a3	87	97.701	ENSONIG00000010296	sf3a3	100	97.701	Oreochromis_niloticus
ENSPREG00000013802	sf3a3	94	89.552	ENSOANG00000002473	SF3A3	100	89.552	Ornithorhynchus_anatinus
ENSPREG00000013802	sf3a3	100	90.220	ENSOCUG00000005407	SF3A3	100	90.220	Oryctolagus_cuniculus
ENSPREG00000013802	sf3a3	100	96.208	ENSORLG00000008175	sf3a3	100	96.208	Oryzias_latipes
ENSPREG00000013802	sf3a3	100	96.008	ENSORLG00020013708	sf3a3	100	96.008	Oryzias_latipes_hni
ENSPREG00000013802	sf3a3	100	95.808	ENSORLG00015004104	sf3a3	100	95.808	Oryzias_latipes_hsok
ENSPREG00000013802	sf3a3	100	97.206	ENSOMEG00000020177	sf3a3	100	97.206	Oryzias_melastigma
ENSPREG00000013802	sf3a3	100	90.020	ENSOARG00000019950	SF3A3	100	90.020	Ovis_aries
ENSPREG00000013802	sf3a3	100	68.862	ENSPPAG00000039955	-	100	68.463	Pan_paniscus
ENSPREG00000013802	sf3a3	100	90.020	ENSPPAG00000034066	SF3A3	100	90.020	Pan_paniscus
ENSPREG00000013802	sf3a3	100	90.020	ENSPPRG00000001258	SF3A3	100	90.020	Panthera_pardus
ENSPREG00000013802	sf3a3	100	90.020	ENSPTIG00000007515	SF3A3	100	90.020	Panthera_tigris_altaica
ENSPREG00000013802	sf3a3	100	70.060	ENSPTRG00000046013	-	100	69.661	Pan_troglodytes
ENSPREG00000013802	sf3a3	100	90.020	ENSPTRG00000000559	SF3A3	100	90.020	Pan_troglodytes
ENSPREG00000013802	sf3a3	100	90.020	ENSPANG00000021859	SF3A3	100	90.020	Papio_anubis
ENSPREG00000013802	sf3a3	100	77.246	ENSPANG00000029393	-	100	78.643	Papio_anubis
ENSPREG00000013802	sf3a3	87	80.682	ENSPANG00000031214	-	100	65.269	Papio_anubis
ENSPREG00000013802	sf3a3	100	92.415	ENSPKIG00000004719	sf3a3	100	92.415	Paramormyrops_kingsleyae
ENSPREG00000013802	sf3a3	100	88.270	ENSPSIG00000004273	SF3A3	100	88.270	Pelodiscus_sinensis
ENSPREG00000013802	sf3a3	91	94.967	ENSPMGG00000003610	sf3a3	94	94.967	Periophthalmus_magnuspinnatus
ENSPREG00000013802	sf3a3	100	90.220	ENSPEMG00000020805	Sf3a3	100	90.220	Peromyscus_maniculatus_bairdii
ENSPREG00000013802	sf3a3	54	77.407	ENSPMAG00000001044	sf3a3	98	77.407	Petromyzon_marinus
ENSPREG00000013802	sf3a3	100	89.820	ENSPCIG00000025719	SF3A3	100	89.820	Phascolarctos_cinereus
ENSPREG00000013802	sf3a3	100	99.601	ENSPFOG00000005284	sf3a3	100	99.601	Poecilia_formosa
ENSPREG00000013802	sf3a3	99	96.177	ENSPLAG00000003979	sf3a3	92	96.177	Poecilia_latipinna
ENSPREG00000013802	sf3a3	76	99.213	ENSPMEG00000021132	sf3a3	88	99.213	Poecilia_mexicana
ENSPREG00000013802	sf3a3	100	87.425	ENSPPYG00000001519	SF3A3	100	87.425	Pongo_abelii
ENSPREG00000013802	sf3a3	100	83.832	ENSPCAG00000010734	SF3A3	100	83.832	Procavia_capensis
ENSPREG00000013802	sf3a3	100	74.052	ENSPCOG00000017131	-	100	74.052	Propithecus_coquereli
ENSPREG00000013802	sf3a3	100	79.167	ENSPCOG00000020389	-	100	79.167	Propithecus_coquereli
ENSPREG00000013802	sf3a3	100	78.643	ENSPVAG00000010158	SF3A3	100	78.643	Pteropus_vampyrus
ENSPREG00000013802	sf3a3	100	97.206	ENSPNYG00000000786	sf3a3	100	97.206	Pundamilia_nyererei
ENSPREG00000013802	sf3a3	100	93.812	ENSPNAG00000010298	sf3a3	100	93.812	Pygocentrus_nattereri
ENSPREG00000013802	sf3a3	100	90.220	ENSRNOG00000007629	Sf3a3	100	90.220	Rattus_norvegicus
ENSPREG00000013802	sf3a3	100	67.465	ENSRBIG00000041123	-	100	67.465	Rhinopithecus_bieti
ENSPREG00000013802	sf3a3	100	90.020	ENSRBIG00000043567	SF3A3	100	90.020	Rhinopithecus_bieti
ENSPREG00000013802	sf3a3	100	66.667	ENSRBIG00000043833	-	100	66.667	Rhinopithecus_bieti
ENSPREG00000013802	sf3a3	100	90.020	ENSRROG00000033888	SF3A3	100	90.020	Rhinopithecus_roxellana
ENSPREG00000013802	sf3a3	94	71.642	ENSRROG00000032346	-	100	71.642	Rhinopithecus_roxellana
ENSPREG00000013802	sf3a3	89	86.819	ENSSBOG00000032688	SF3A3	100	86.819	Saimiri_boliviensis_boliviensis
ENSPREG00000013802	sf3a3	100	65.469	ENSSBOG00000026932	-	100	64.471	Saimiri_boliviensis_boliviensis
ENSPREG00000013802	sf3a3	90	90.508	ENSSHAG00000014530	SF3A3	100	90.508	Sarcophilus_harrisii
ENSPREG00000013802	sf3a3	100	94.611	ENSSFOG00015005975	sf3a3	100	94.611	Scleropages_formosus
ENSPREG00000013802	sf3a3	100	96.008	ENSSMAG00000020213	sf3a3	100	96.008	Scophthalmus_maximus
ENSPREG00000013802	sf3a3	100	93.014	ENSSDUG00000011590	sf3a3	100	93.014	Seriola_dumerili
ENSPREG00000013802	sf3a3	100	97.006	ENSSLDG00000020635	sf3a3	100	97.006	Seriola_lalandi_dorsalis
ENSPREG00000013802	sf3a3	100	89.820	ENSSPUG00000004010	SF3A3	100	89.820	Sphenodon_punctatus
ENSPREG00000013802	sf3a3	100	97.605	ENSSPAG00000018653	sf3a3	100	97.605	Stegastes_partitus
ENSPREG00000013802	sf3a3	100	90.020	ENSSSCG00000003643	SF3A3	100	90.020	Sus_scrofa
ENSPREG00000013802	sf3a3	87	91.264	ENSTGUG00000001466	SF3A3	100	91.055	Taeniopygia_guttata
ENSPREG00000013802	sf3a3	100	95.409	ENSTRUG00000009089	sf3a3	100	95.409	Takifugu_rubripes
ENSPREG00000013802	sf3a3	100	94.831	ENSTNIG00000009800	sf3a3	100	94.831	Tetraodon_nigroviridis
ENSPREG00000013802	sf3a3	100	78.244	ENSTBEG00000007614	SF3A3	100	78.244	Tupaia_belangeri
ENSPREG00000013802	sf3a3	100	89.820	ENSTTRG00000013519	SF3A3	100	89.820	Tursiops_truncatus
ENSPREG00000013802	sf3a3	100	90.020	ENSUAMG00000006134	SF3A3	100	90.020	Ursus_americanus
ENSPREG00000013802	sf3a3	100	90.020	ENSUMAG00000021250	SF3A3	100	90.020	Ursus_maritimus
ENSPREG00000013802	sf3a3	66	93.023	ENSVPAG00000004778	SF3A3	73	93.023	Vicugna_pacos
ENSPREG00000013802	sf3a3	100	86.228	ENSVVUG00000022908	SF3A3	100	86.228	Vulpes_vulpes
ENSPREG00000013802	sf3a3	100	88.423	ENSXETG00000022923	sf3a3	100	88.423	Xenopus_tropicalis
ENSPREG00000013802	sf3a3	100	99.800	ENSXMAG00000017165	sf3a3	100	99.800	Xiphophorus_maculatus