EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000013805 (Gene tree)
Gene ID: 103479799
Gene Symbol: -
Alias: -
Full Name: RNA-binding Raly-like protein
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 68106 bases
Position: chrLG17:24797808-24865913
Accession: 103479799
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000020391	RRM_1	PF00076.22	5.3e-13	1	1
ENSPREP00000020408	RRM_1	PF00076.22	6.4e-13	1	1
ENSPREP00000020400	RRM_1	PF00076.22	6.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000020622	-	1018	-	ENSPREP00000020408	331 (aa)	-	-
ENSPRET00000020605	-	4881	XM_008434457	ENSPREP00000020391	312 (aa)	XP_008432679	UPI0004A24A6E
ENSPRET00000020614	-	1097	-	ENSPREP00000020400	351 (aa)	-	-

Gene Model

Click here to download ENSPREG00000013805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000013805's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000013805	-	91	46.801	ENSPREG00000007928	-	94	47.195
ENSPREG00000013805	-	97	67.097	ENSPREG00000001956	ralyl	100	71.724
ENSPREG00000013805	-	84	48.699	ENSPREG00000001852	-	91	49.123

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000013805	-	100	86.859	ENSAPOG00000008744	-	97	92.933	Acanthochromis_polyacanthus
ENSPREG00000013805	-	97	77.814	ENSACIG00000007143	-	98	83.390	Amphilophus_citrinellus
ENSPREG00000013805	-	100	68.038	ENSAOCG00000001605	-	97	73.171	Amphiprion_ocellaris
ENSPREG00000013805	-	100	88.782	ENSAOCG00000023599	-	97	94.700	Amphiprion_ocellaris
ENSPREG00000013805	-	97	78.730	ENSATEG00000022219	-	94	88.963	Anabas_testudineus
ENSPREG00000013805	-	87	66.052	ENSATEG00000023356	-	96	72.112	Anabas_testudineus
ENSPREG00000013805	-	100	88.141	ENSACLG00000011720	-	97	93.993	Astatotilapia_calliptera
ENSPREG00000013805	-	100	68.671	ENSACLG00000006949	-	99	71.672	Astatotilapia_calliptera
ENSPREG00000013805	-	100	60.063	ENSAMXG00000032617	-	97	64.014	Astyanax_mexicanus
ENSPREG00000013805	-	100	68.354	ENSAMXG00000019031	-	97	71.777	Astyanax_mexicanus
ENSPREG00000013805	-	100	76.282	ENSCSEG00000014237	-	97	81.272	Cynoglossus_semilaevis
ENSPREG00000013805	-	100	68.354	ENSCVAG00000018104	-	97	73.776	Cyprinodon_variegatus
ENSPREG00000013805	-	100	95.513	ENSCVAG00000013624	-	100	95.513	Cyprinodon_variegatus
ENSPREG00000013805	-	59	71.038	ENSDARG00000090292	ralyl	81	78.395	Danio_rerio
ENSPREG00000013805	-	94	57.860	ENSELUG00000001702	-	96	62.366	Esox_lucius
ENSPREG00000013805	-	53	73.333	ENSGMOG00000005914	-	100	73.333	Gadus_morhua
ENSPREG00000013805	-	57	78.652	ENSGACG00000004991	-	91	82.530	Gasterosteus_aculeatus
ENSPREG00000013805	-	100	88.462	ENSHBUG00000010040	-	97	94.346	Haplochromis_burtoni
ENSPREG00000013805	-	100	68.671	ENSHBUG00000015412	-	97	72.125	Haplochromis_burtoni
ENSPREG00000013805	-	100	68.239	ENSIPUG00000000507	ralyl	97	72.822	Ictalurus_punctatus
ENSPREG00000013805	-	100	84.936	ENSKMAG00000022093	-	97	91.519	Kryptolebias_marmoratus
ENSPREG00000013805	-	100	67.722	ENSKMAG00000018155	-	97	73.519	Kryptolebias_marmoratus
ENSPREG00000013805	-	100	84.295	ENSLBEG00000012873	-	97	89.753	Labrus_bergylta
ENSPREG00000013805	-	100	66.772	ENSLBEG00000011011	-	97	71.429	Labrus_bergylta
ENSPREG00000013805	-	100	64.557	ENSLOCG00000012787	ralyl	97	68.858	Lepisosteus_oculatus
ENSPREG00000013805	-	99	82.258	ENSMAMG00000001723	-	95	89.825	Mastacembelus_armatus
ENSPREG00000013805	-	98	65.714	ENSMZEG00005018748	-	99	71.672	Maylandia_zebra
ENSPREG00000013805	-	100	88.141	ENSMZEG00005024447	-	97	93.993	Maylandia_zebra
ENSPREG00000013805	-	97	77.848	ENSMMOG00000020441	-	87	85.667	Mola_mola
ENSPREG00000013805	-	100	86.218	ENSMALG00000019019	-	76	91.873	Monopterus_albus
ENSPREG00000013805	-	100	66.139	ENSMALG00000012952	-	97	71.080	Monopterus_albus
ENSPREG00000013805	-	98	65.397	ENSNBRG00000011376	-	99	71.672	Neolamprologus_brichardi
ENSPREG00000013805	-	97	78.135	ENSNBRG00000011206	-	98	83.729	Neolamprologus_brichardi
ENSPREG00000013805	-	100	68.354	ENSORLG00000012719	-	97	73.519	Oryzias_latipes
ENSPREG00000013805	-	100	81.410	ENSORLG00000017934	-	97	87.279	Oryzias_latipes
ENSPREG00000013805	-	100	80.449	ENSORLG00020000082	-	97	86.219	Oryzias_latipes_hni
ENSPREG00000013805	-	100	68.354	ENSORLG00020004438	-	97	73.519	Oryzias_latipes_hni
ENSPREG00000013805	-	100	68.671	ENSORLG00015004727	-	97	73.868	Oryzias_latipes_hsok
ENSPREG00000013805	-	100	80.769	ENSORLG00015004280	-	97	86.572	Oryzias_latipes_hsok
ENSPREG00000013805	-	100	68.038	ENSOMEG00000001170	-	97	73.171	Oryzias_melastigma
ENSPREG00000013805	-	100	82.372	ENSOMEG00000011821	-	97	87.986	Oryzias_melastigma
ENSPREG00000013805	-	100	68.690	ENSPKIG00000015926	-	97	72.887	Paramormyrops_kingsleyae
ENSPREG00000013805	-	99	69.937	ENSPMGG00000009532	-	98	74.658	Periophthalmus_magnuspinnatus
ENSPREG00000013805	-	80	62.846	ENSPMGG00000014481	-	95	69.397	Periophthalmus_magnuspinnatus
ENSPREG00000013805	-	97	88.217	ENSPFOG00000006120	-	99	94.932	Poecilia_formosa
ENSPREG00000013805	-	97	67.097	ENSPLAG00000011323	ralyl	100	72.759	Poecilia_latipinna
ENSPREG00000013805	-	97	83.882	ENSPLAG00000009877	-	77	90.690	Poecilia_latipinna
ENSPREG00000013805	-	97	67.097	ENSPMEG00000023847	ralyl	100	72.759	Poecilia_mexicana
ENSPREG00000013805	-	100	85.028	ENSPMEG00000013624	-	100	85.028	Poecilia_mexicana
ENSPREG00000013805	-	97	78.135	ENSPNYG00000008772	-	98	83.729	Pundamilia_nyererei
ENSPREG00000013805	-	98	65.714	ENSPNYG00000003548	-	99	71.672	Pundamilia_nyererei
ENSPREG00000013805	-	100	62.500	ENSPNAG00000026098	-	97	66.078	Pygocentrus_nattereri
ENSPREG00000013805	-	100	67.405	ENSPNAG00000000498	-	86	71.181	Pygocentrus_nattereri
ENSPREG00000013805	-	100	68.987	ENSSFOG00015009401	-	97	73.171	Scleropages_formosus
ENSPREG00000013805	-	97	59.477	ENSSFOG00015004575	-	96	65.385	Scleropages_formosus
ENSPREG00000013805	-	100	68.354	ENSSMAG00000005608	-	97	72.917	Scophthalmus_maximus
ENSPREG00000013805	-	97	81.311	ENSSMAG00000015907	-	94	87.153	Scophthalmus_maximus
ENSPREG00000013805	-	100	67.722	ENSSDUG00000007587	-	97	72.822	Seriola_dumerili
ENSPREG00000013805	-	100	88.462	ENSSDUG00000012473	-	97	94.346	Seriola_dumerili
ENSPREG00000013805	-	100	67.722	ENSSLDG00000020603	-	97	72.222	Seriola_lalandi_dorsalis
ENSPREG00000013805	-	100	88.141	ENSSLDG00000011534	-	97	93.993	Seriola_lalandi_dorsalis
ENSPREG00000013805	-	97	73.927	ENSSPAG00000013858	-	95	79.443	Stegastes_partitus
ENSPREG00000013805	-	97	81.848	ENSTRUG00000003829	-	97	86.063	Takifugu_rubripes
ENSPREG00000013805	-	97	78.025	ENSTNIG00000005594	-	100	83.557	Tetraodon_nigroviridis
ENSPREG00000013805	-	100	60.377	ENSXETG00000017729	ralyl	96	64.014	Xenopus_tropicalis
ENSPREG00000013805	-	97	65.094	ENSXCOG00000015156	-	93	71.141	Xiphophorus_couchianus
ENSPREG00000013805	-	100	99.038	ENSXMAG00000007614	-	100	99.038	Xiphophorus_maculatus
ENSPREG00000013805	-	100	68.354	ENSXMAG00000008396	-	97	73.519	Xiphophorus_maculatus