EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000013913 (Gene tree)
Gene ID: 103469094
Gene Symbol: tufm
Alias: fi06f04|wu:fi06f04|zgc:110766
Full Name: Tu translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 10587 bases
Position: chrLG8:20704895-20715481
Accession: 103469094
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000020585	GTP_EFTU	PF00009.27	2.1e-55	1	1
ENSPREP00000020576	GTP_EFTU	PF00009.27	1.9e-40	1	1
ENSPREP00000020576	GTP_EFTU_D2	PF03144.25	2.3e-16	1	1
ENSPREP00000020585	GTP_EFTU_D2	PF03144.25	2.5e-16	1	1
ENSPREP00000020585	GTP_EFTU_D3	PF03143.17	2.1e-24	1	1
ENSPREP00000020576	GTP_EFTU_D3	PF03143.17	2.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000020799	-	5475	XM_008416586	ENSPREP00000020585	446 (aa)	XP_008414808	UPI0004A4F10E
ENSPRET00000020791	-	1296	-	ENSPREP00000020576	431 (aa)	-	-

Gene Model

Click here to download ENSPREG00000013913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000013913's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000013913	tufm	87	30.942	ENSPREG00000006280	si:dkey-37o8.1	93	34.454

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000013913	tufm	92	77.913	ENSG00000178952	TUFM	93	77.014	Homo_sapiens
ENSPREG00000013913	tufm	100	92.825	ENSAPOG00000013385	tufm	100	92.825	Acanthochromis_polyacanthus
ENSPREG00000013913	tufm	94	76.485	ENSAMEG00000015551	TUFM	93	76.485	Ailuropoda_melanoleuca
ENSPREG00000013913	tufm	94	90.974	ENSACIG00000007388	tufm	97	90.974	Amphilophus_citrinellus
ENSPREG00000013913	tufm	100	92.825	ENSAOCG00000001032	tufm	100	92.825	Amphiprion_ocellaris
ENSPREG00000013913	tufm	100	92.825	ENSAPEG00000015751	tufm	100	92.825	Amphiprion_percula
ENSPREG00000013913	tufm	100	91.256	ENSATEG00000002905	tufm	97	91.256	Anabas_testudineus
ENSPREG00000013913	tufm	99	74.058	ENSACAG00000005399	TUFM	89	79.268	Anolis_carolinensis
ENSPREG00000013913	tufm	99	72.727	ENSANAG00000022206	TUFM	93	75.297	Aotus_nancymaae
ENSPREG00000013913	tufm	100	92.377	ENSACLG00000007403	tufm	93	92.377	Astatotilapia_calliptera
ENSPREG00000013913	tufm	99	74.723	ENSBTAG00000019216	TUFM	98	73.034	Bos_taurus
ENSPREG00000013913	tufm	90	57.457	WBGene00007000	tufm-1	84	56.802	Caenorhabditis_elegans
ENSPREG00000013913	tufm	99	73.171	ENSCJAG00000006236	TUFM	93	75.534	Callithrix_jacchus
ENSPREG00000013913	tufm	99	74.501	ENSCAFG00000017216	TUFM	98	72.809	Canis_familiaris
ENSPREG00000013913	tufm	99	74.501	ENSCAFG00020017574	TUFM	98	72.809	Canis_lupus_dingo
ENSPREG00000013913	tufm	99	74.945	ENSCHIG00000020583	TUFM	98	73.258	Capra_hircus
ENSPREG00000013913	tufm	100	75.442	ENSTSYG00000026053	TUFM	93	77.962	Carlito_syrichta
ENSPREG00000013913	tufm	99	73.836	ENSCPOG00000010534	TUFM	93	76.485	Cavia_porcellus
ENSPREG00000013913	tufm	99	73.392	ENSCCAG00000033296	TUFM	93	75.772	Cebus_capucinus
ENSPREG00000013913	tufm	99	74.501	ENSCATG00000035822	TUFM	93	77.197	Cercocebus_atys
ENSPREG00000013913	tufm	99	73.836	ENSCLAG00000013969	TUFM	93	76.485	Chinchilla_lanigera
ENSPREG00000013913	tufm	99	73.614	ENSCSAG00000006314	TUFM	93	76.722	Chlorocebus_sabaeus
ENSPREG00000013913	tufm	100	74.558	ENSCHOG00000009077	TUFM	98	72.422	Choloepus_hoffmanni
ENSPREG00000013913	tufm	99	75.610	ENSCPBG00000003874	TUFM	91	79.286	Chrysemys_picta_bellii
ENSPREG00000013913	tufm	97	53.456	ENSCING00000002841	-	99	53.456	Ciona_intestinalis
ENSPREG00000013913	tufm	90	59.500	ENSCSAVG00000009380	-	86	59.500	Ciona_savignyi
ENSPREG00000013913	tufm	100	73.836	ENSCANG00000035829	TUFM	93	76.303	Colobus_angolensis_palliatus
ENSPREG00000013913	tufm	99	73.614	ENSCGRG00001022949	Tufm	93	76.247	Cricetulus_griseus_chok1gshd
ENSPREG00000013913	tufm	99	73.614	ENSCGRG00000001868	-	93	76.247	Cricetulus_griseus_crigri
ENSPREG00000013913	tufm	97	51.620	ENSCGRG00000013193	-	98	51.620	Cricetulus_griseus_crigri
ENSPREG00000013913	tufm	100	84.978	ENSCSEG00000013841	tufm	100	84.978	Cynoglossus_semilaevis
ENSPREG00000013913	tufm	100	93.946	ENSCVAG00000006251	tufm	100	93.946	Cyprinodon_variegatus
ENSPREG00000013913	tufm	100	82.960	ENSDARG00000104173	tufm	99	82.960	Danio_rerio
ENSPREG00000013913	tufm	100	73.230	ENSDNOG00000047636	TUFM	92	76.316	Dasypus_novemcinctus
ENSPREG00000013913	tufm	94	61.848	ENSDORG00000023544	-	96	63.317	Dipodomys_ordii
ENSPREG00000013913	tufm	91	68.059	FBgn0024556	mEFTu1	83	68.059	Drosophila_melanogaster
ENSPREG00000013913	tufm	85	61.417	ENSETEG00000009601	TUFM	94	61.417	Echinops_telfairi
ENSPREG00000013913	tufm	91	70.617	ENSEBUG00000015907	tufm	66	70.864	Eptatretus_burgeri
ENSPREG00000013913	tufm	99	74.444	ENSEASG00005015477	TUFM	91	77.859	Equus_asinus_asinus
ENSPREG00000013913	tufm	99	74.444	ENSECAG00000019763	TUFM	91	77.859	Equus_caballus
ENSPREG00000013913	tufm	80	77.183	ENSEEUG00000001402	TUFM	89	77.183	Erinaceus_europaeus
ENSPREG00000013913	tufm	100	87.500	ENSELUG00000013410	tufm	96	87.500	Esox_lucius
ENSPREG00000013913	tufm	94	76.960	ENSFCAG00000003103	TUFM	60	76.960	Felis_catus
ENSPREG00000013913	tufm	89	72.362	ENSFDAG00000010881	TUFM	99	73.968	Fukomys_damarensis
ENSPREG00000013913	tufm	94	85.167	ENSFHEG00000020646	tufm	93	85.167	Fundulus_heteroclitus
ENSPREG00000013913	tufm	100	86.771	ENSGMOG00000014616	tufm	100	86.771	Gadus_morhua
ENSPREG00000013913	tufm	100	93.722	ENSGAFG00000004682	tufm	100	93.722	Gambusia_affinis
ENSPREG00000013913	tufm	100	90.135	ENSGACG00000012961	tufm	100	90.135	Gasterosteus_aculeatus
ENSPREG00000013913	tufm	99	77.273	ENSGAGG00000006132	TUFM	99	79.901	Gopherus_agassizii
ENSPREG00000013913	tufm	92	77.913	ENSGGOG00000014136	TUFM	93	77.014	Gorilla_gorilla
ENSPREG00000013913	tufm	100	92.825	ENSHBUG00000019031	tufm	93	92.825	Haplochromis_burtoni
ENSPREG00000013913	tufm	100	71.903	ENSHGLG00000006613	TUFM	97	71.364	Heterocephalus_glaber_female
ENSPREG00000013913	tufm	98	71.429	ENSHGLG00100004096	TUFM	97	71.429	Heterocephalus_glaber_male
ENSPREG00000013913	tufm	99	90.068	ENSHCOG00000014418	tufm	99	90.068	Hippocampus_comes
ENSPREG00000013913	tufm	100	85.202	ENSIPUG00000022457	tufm	100	85.202	Ictalurus_punctatus
ENSPREG00000013913	tufm	95	45.642	ENSIPUG00000020682	-	91	54.088	Ictalurus_punctatus
ENSPREG00000013913	tufm	99	74.723	ENSSTOG00000011837	TUFM	99	74.279	Ictidomys_tridecemlineatus
ENSPREG00000013913	tufm	99	73.497	ENSJJAG00000011840	Tufm	93	76.485	Jaculus_jaculus
ENSPREG00000013913	tufm	100	88.341	ENSKMAG00000009794	tufm	100	88.341	Kryptolebias_marmoratus
ENSPREG00000013913	tufm	100	88.789	ENSLBEG00000023735	tufm	100	88.789	Labrus_bergylta
ENSPREG00000013913	tufm	99	77.925	ENSLACG00000008242	TUFM	91	82.609	Latimeria_chalumnae
ENSPREG00000013913	tufm	99	71.525	ENSLAFG00000028911	TUFM	93	73.872	Loxodonta_africana
ENSPREG00000013913	tufm	100	74.558	ENSMFAG00000033739	TUFM	93	77.251	Macaca_fascicularis
ENSPREG00000013913	tufm	100	74.558	ENSMMUG00000003303	TUFM	93	77.251	Macaca_mulatta
ENSPREG00000013913	tufm	100	74.558	ENSMNEG00000006031	TUFM	93	77.251	Macaca_nemestrina
ENSPREG00000013913	tufm	99	74.501	ENSMLEG00000042133	TUFM	93	77.197	Mandrillus_leucophaeus
ENSPREG00000013913	tufm	100	90.807	ENSMAMG00000002053	tufm	100	90.807	Mastacembelus_armatus
ENSPREG00000013913	tufm	100	92.601	ENSMZEG00005010857	tufm	93	92.601	Maylandia_zebra
ENSPREG00000013913	tufm	99	74.058	ENSMAUG00000010490	Tufm	93	76.722	Mesocricetus_auratus
ENSPREG00000013913	tufm	99	73.392	ENSMICG00000007650	TUFM	98	71.685	Microcebus_murinus
ENSPREG00000013913	tufm	99	74.501	ENSMOCG00000010051	Tufm	93	76.960	Microtus_ochrogaster
ENSPREG00000013913	tufm	96	89.448	ENSMMOG00000012344	tufm	95	89.448	Mola_mola
ENSPREG00000013913	tufm	96	76.566	ENSMODG00000015564	TUFM	92	78.417	Monodelphis_domestica
ENSPREG00000013913	tufm	100	88.565	ENSMALG00000020254	tufm	100	88.565	Monopterus_albus
ENSPREG00000013913	tufm	99	74.058	MGP_CAROLIEiJ_G0030449	-	93	76.722	Mus_caroli
ENSPREG00000013913	tufm	99	74.058	MGP_CAROLIEiJ_G0030448	-	98	79.825	Mus_caroli
ENSPREG00000013913	tufm	99	74.058	ENSMUSG00000073838	Tufm	98	79.825	Mus_musculus
ENSPREG00000013913	tufm	99	74.279	MGP_PahariEiJ_G0013659	-	93	76.960	Mus_pahari
ENSPREG00000013913	tufm	99	74.279	MGP_PahariEiJ_G0013658	-	98	79.825	Mus_pahari
ENSPREG00000013913	tufm	99	74.279	MGP_SPRETEiJ_G0031562	-	98	80.702	Mus_spretus
ENSPREG00000013913	tufm	99	68.648	MGP_SPRETEiJ_G0031563	-	94	70.742	Mus_spretus
ENSPREG00000013913	tufm	81	77.747	ENSMPUG00000012816	TUFM	98	77.297	Mustela_putorius_furo
ENSPREG00000013913	tufm	99	73.392	ENSMLUG00000012335	-	92	76.978	Myotis_lucifugus
ENSPREG00000013913	tufm	99	74.501	ENSNGAG00000008610	Tufm	98	72.584	Nannospalax_galili
ENSPREG00000013913	tufm	100	79.596	ENSNBRG00000006466	tufm	96	92.818	Neolamprologus_brichardi
ENSPREG00000013913	tufm	100	69.536	ENSNLEG00000011063	TUFM	97	67.574	Nomascus_leucogenys
ENSPREG00000013913	tufm	78	78.674	ENSMEUG00000011131	TUFM	100	78.674	Notamacropus_eugenii
ENSPREG00000013913	tufm	88	76.452	ENSOPRG00000002318	-	85	76.452	Ochotona_princeps
ENSPREG00000013913	tufm	100	92.825	ENSONIG00000019389	tufm	100	92.825	Oreochromis_niloticus
ENSPREG00000013913	tufm	93	78.313	ENSOANG00000013114	TUFM	95	78.313	Ornithorhynchus_anatinus
ENSPREG00000013913	tufm	94	77.143	ENSOCUG00000002683	TUFM	92	77.143	Oryctolagus_cuniculus
ENSPREG00000013913	tufm	100	92.152	ENSORLG00000011497	tufm	100	92.152	Oryzias_latipes
ENSPREG00000013913	tufm	100	92.377	ENSORLG00020013437	tufm	100	92.377	Oryzias_latipes_hni
ENSPREG00000013913	tufm	100	92.377	ENSORLG00015003107	tufm	100	92.377	Oryzias_latipes_hsok
ENSPREG00000013913	tufm	100	93.274	ENSOMEG00000016958	tufm	100	93.274	Oryzias_melastigma
ENSPREG00000013913	tufm	99	73.614	ENSOGAG00000006875	TUFM	98	71.910	Otolemur_garnettii
ENSPREG00000013913	tufm	90	78.856	ENSOARG00000002357	TUFM	97	78.856	Ovis_aries
ENSPREG00000013913	tufm	92	77.913	ENSPPAG00000035168	TUFM	93	77.014	Pan_paniscus
ENSPREG00000013913	tufm	94	76.960	ENSPPRG00000014248	TUFM	98	72.584	Panthera_pardus
ENSPREG00000013913	tufm	95	76.123	ENSPTIG00000009980	TUFM	98	77.218	Panthera_tigris_altaica
ENSPREG00000013913	tufm	92	77.913	ENSPTRG00000007939	TUFM	93	77.014	Pan_troglodytes
ENSPREG00000013913	tufm	100	74.336	ENSPANG00000019624	TUFM	93	77.014	Papio_anubis
ENSPREG00000013913	tufm	100	83.705	ENSPKIG00000023809	tufm	98	81.920	Paramormyrops_kingsleyae
ENSPREG00000013913	tufm	71	75.873	ENSPSIG00000005302	TUFM	100	75.873	Pelodiscus_sinensis
ENSPREG00000013913	tufm	94	88.756	ENSPMGG00000015631	tufm	99	88.756	Periophthalmus_magnuspinnatus
ENSPREG00000013913	tufm	99	73.836	ENSPEMG00000012208	Tufm	93	76.247	Peromyscus_maniculatus_bairdii
ENSPREG00000013913	tufm	99	73.407	ENSPCIG00000025208	TUFM	91	77.218	Phascolarctos_cinereus
ENSPREG00000013913	tufm	100	98.879	ENSPFOG00000007043	tufm	100	98.879	Poecilia_formosa
ENSPREG00000013913	tufm	100	96.171	ENSPLAG00000014372	tufm	100	96.171	Poecilia_latipinna
ENSPREG00000013913	tufm	100	99.103	ENSPMEG00000019508	tufm	100	99.103	Poecilia_mexicana
ENSPREG00000013913	tufm	100	96.875	ENSPMEG00000014520	-	100	98.214	Poecilia_mexicana
ENSPREG00000013913	tufm	99	73.614	ENSPPYG00000007226	TUFM	93	76.247	Pongo_abelii
ENSPREG00000013913	tufm	99	68.456	ENSPCAG00000015294	TUFM	93	70.616	Procavia_capensis
ENSPREG00000013913	tufm	99	73.392	ENSPCOG00000012267	TUFM	92	76.429	Propithecus_coquereli
ENSPREG00000013913	tufm	99	92.793	ENSPNYG00000008905	tufm	100	92.793	Pundamilia_nyererei
ENSPREG00000013913	tufm	100	89.238	ENSPNAG00000018881	tufm	100	89.238	Pygocentrus_nattereri
ENSPREG00000013913	tufm	99	74.279	ENSRNOG00000018604	Tufm	93	76.960	Rattus_norvegicus
ENSPREG00000013913	tufm	96	73.103	ENSRBIG00000042008	-	91	75.616	Rhinopithecus_bieti
ENSPREG00000013913	tufm	57	76.378	ENSRBIG00000036713	-	93	76.378	Rhinopithecus_bieti
ENSPREG00000013913	tufm	61	74.725	ENSRROG00000044977	-	74	74.725	Rhinopithecus_roxellana
ENSPREG00000013913	tufm	100	74.279	ENSRROG00000036858	-	93	76.777	Rhinopithecus_roxellana
ENSPREG00000013913	tufm	94	60.185	YOR187W	TUF1	93	62.010	Saccharomyces_cerevisiae
ENSPREG00000013913	tufm	98	74.032	ENSSBOG00000026542	TUFM	93	75.952	Saimiri_boliviensis_boliviensis
ENSPREG00000013913	tufm	98	76.376	ENSSHAG00000012121	TUFM	97	78.469	Sarcophilus_harrisii
ENSPREG00000013913	tufm	100	84.821	ENSSFOG00015013352	tufm	100	83.482	Scleropages_formosus
ENSPREG00000013913	tufm	100	90.359	ENSSMAG00000010053	tufm	100	90.359	Scophthalmus_maximus
ENSPREG00000013913	tufm	100	92.152	ENSSDUG00000016896	tufm	100	92.152	Seriola_dumerili
ENSPREG00000013913	tufm	100	91.928	ENSSLDG00000006494	tufm	100	91.928	Seriola_lalandi_dorsalis
ENSPREG00000013913	tufm	81	77.285	ENSSARG00000011228	TUFM	95	77.285	Sorex_araneus
ENSPREG00000013913	tufm	96	69.124	ENSSPUG00000016312	TUFM	99	68.085	Sphenodon_punctatus
ENSPREG00000013913	tufm	100	90.359	ENSSPAG00000009936	tufm	99	90.359	Stegastes_partitus
ENSPREG00000013913	tufm	99	74.945	ENSSSCG00000007803	TUFM	98	73.034	Sus_scrofa
ENSPREG00000013913	tufm	100	89.910	ENSTRUG00000008300	tufm	100	89.910	Takifugu_rubripes
ENSPREG00000013913	tufm	93	74.341	ENSTBEG00000015029	TUFM	98	68.680	Tupaia_belangeri
ENSPREG00000013913	tufm	58	76.494	ENSTTRG00000005930	-	57	76.265	Tursiops_truncatus
ENSPREG00000013913	tufm	62	77.091	ENSTTRG00000001980	-	100	77.091	Tursiops_truncatus
ENSPREG00000013913	tufm	100	73.894	ENSUAMG00000001471	TUFM	99	71.749	Ursus_americanus
ENSPREG00000013913	tufm	91	78.325	ENSUMAG00000009341	TUFM	99	78.325	Ursus_maritimus
ENSPREG00000013913	tufm	62	76.364	ENSVPAG00000009541	TUFM	100	76.364	Vicugna_pacos
ENSPREG00000013913	tufm	99	74.723	ENSVVUG00000024170	TUFM	98	72.809	Vulpes_vulpes
ENSPREG00000013913	tufm	84	51.587	ENSXETG00000028019	-	78	88.298	Xenopus_tropicalis
ENSPREG00000013913	tufm	94	94.498	ENSXMAG00000011848	tufm	96	94.498	Xiphophorus_maculatus