EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000014116 (Gene tree)
Gene ID: 103469573
Gene Symbol: rabl6b
Alias: si:ch211-102c2.5
Full Name: RAB%2C member RAS oncogene family like 6
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 17477 bases
Position: chrLG9:1091445-1108921
Accession: 103469573
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000021027	MMR_HSR1	PF01926.23	0.00011	1	1
ENSPREP00000021067	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000021272	-	2407	-	ENSPREP00000021046	723 (aa)	-	-
ENSPRET00000021292	-	2254	-	ENSPREP00000021067	741 (aa)	-	-
ENSPRET00000021181	-	2133	XM_008417339	ENSPREP00000020958	710 (aa)	XP_008415561	-
ENSPRET00000021221	-	2550	-	ENSPREP00000020997	718 (aa)	-	-
ENSPRET00000021189	-	2350	XM_008417334	ENSPREP00000020965	704 (aa)	XP_008415556	-
ENSPRET00000021251	-	2520	-	ENSPREP00000021027	708 (aa)	-	-

Gene Model

Click here to download ENSPREG00000014116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000014116's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000014116	rabl6b	94	79.042	ENSACIG00000010721	rabl6b	89	79.192	Amphilophus_citrinellus
ENSPREG00000014116	rabl6b	94	85.607	ENSATEG00000012055	rabl6b	90	85.333	Anabas_testudineus
ENSPREG00000014116	rabl6b	93	77.198	ENSCSEG00000012430	-	95	77.386	Cynoglossus_semilaevis
ENSPREG00000014116	rabl6b	92	79.341	ENSCSEG00000016135	rabl6b	90	78.198	Cynoglossus_semilaevis
ENSPREG00000014116	rabl6b	94	67.930	ENSELUG00000004448	rabl6b	90	75.172	Esox_lucius
ENSPREG00000014116	rabl6b	95	88.410	ENSGAFG00000013561	rabl6b	100	86.611	Gambusia_affinis
ENSPREG00000014116	rabl6b	94	80.179	ENSGACG00000005242	rabl6b	89	80.179	Gasterosteus_aculeatus
ENSPREG00000014116	rabl6b	94	84.835	ENSHBUG00000014235	rabl6b	90	85.185	Haplochromis_burtoni
ENSPREG00000014116	rabl6b	94	66.000	ENSIPUG00000019266	rabl6	90	65.571	Ictalurus_punctatus
ENSPREG00000014116	rabl6b	94	79.910	ENSMAMG00000019516	rabl6b	90	79.259	Mastacembelus_armatus
ENSPREG00000014116	rabl6b	67	73.895	ENSMZEG00005003942	rabl6b	99	74.526	Maylandia_zebra
ENSPREG00000014116	rabl6b	68	71.667	ENSMMOG00000009459	rabl6b	97	69.620	Mola_mola
ENSPREG00000014116	rabl6b	94	84.431	ENSMALG00000002029	rabl6b	89	84.431	Monopterus_albus
ENSPREG00000014116	rabl6b	67	74.895	ENSNBRG00000012512	rabl6b	99	74.473	Neolamprologus_brichardi
ENSPREG00000014116	rabl6b	94	83.333	ENSONIG00000010408	rabl6b	90	82.912	Oreochromis_niloticus
ENSPREG00000014116	rabl6b	94	79.525	ENSORLG00020017557	rabl6b	89	79.586	Oryzias_latipes_hni
ENSPREG00000014116	rabl6b	94	79.792	ENSORLG00015007848	rabl6b	92	79.852	Oryzias_latipes_hsok
ENSPREG00000014116	rabl6b	94	81.175	ENSOMEG00000022840	rabl6b	97	80.386	Oryzias_melastigma
ENSPREG00000014116	rabl6b	95	65.345	ENSPKIG00000007459	RABL6	88	65.982	Paramormyrops_kingsleyae
ENSPREG00000014116	rabl6b	94	60.649	ENSPCIG00000023722	RABL6	92	59.028	Phascolarctos_cinereus
ENSPREG00000014116	rabl6b	94	97.754	ENSPFOG00000003250	rabl6b	89	97.754	Poecilia_formosa
ENSPREG00000014116	rabl6b	94	97.605	ENSPLAG00000019562	rabl6b	89	97.605	Poecilia_latipinna
ENSPREG00000014116	rabl6b	94	97.605	ENSPMEG00000020472	rabl6b	89	97.605	Poecilia_mexicana
ENSPREG00000014116	rabl6b	95	63.950	ENSPNAG00000010857	rabl6b	94	65.871	Pygocentrus_nattereri
ENSPREG00000014116	rabl6b	94	66.864	ENSSFOG00015013414	-	89	66.519	Scleropages_formosus
ENSPREG00000014116	rabl6b	94	67.496	ENSSFOG00015017388	RABL6	90	67.643	Scleropages_formosus
ENSPREG00000014116	rabl6b	93	84.545	ENSSMAG00000012543	rabl6b	97	84.101	Scophthalmus_maximus
ENSPREG00000014116	rabl6b	93	87.121	ENSSDUG00000006564	rabl6b	90	86.053	Seriola_dumerili
ENSPREG00000014116	rabl6b	97	86.416	ENSSPAG00000021033	rabl6b	99	86.416	Stegastes_partitus
ENSPREG00000014116	rabl6b	94	77.353	ENSTNIG00000010595	rabl6b	95	77.172	Tetraodon_nigroviridis