EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000014149 (Gene tree)
Gene ID: 103461055
Gene Symbol: fmr1 (1 of many)
Alias: -
Full Name: fragile X mental retardation protein 1-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 4227 bases
Position: chrKK215552.1:8233-12459
Accession: 103461055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000020915	KH_1	PF00013.29	1.9e-15	1	1
ENSPREP00000020915	FXMRP1_C_core	PF12235.8	1.3e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000021136	-	1880	XM_008403375	ENSPREP00000020915	400 (aa)	XP_008401597	-

Gene Model

Click here to download ENSPREG00000014149's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000014149's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000014149	fmr1	99	56.064	ENSG00000102081	FMR1	84	86.047	Homo_sapiens
ENSPREG00000014149	fmr1	99	88.529	ENSAPOG00000006422	fmr1	66	88.279	Acanthochromis_polyacanthus
ENSPREG00000014149	fmr1	99	83.123	ENSACIG00000022552	fmr1	64	84.211	Amphilophus_citrinellus
ENSPREG00000014149	fmr1	99	85.075	ENSAOCG00000008025	fmr1	59	94.340	Amphiprion_ocellaris
ENSPREG00000014149	fmr1	99	86.816	ENSAPEG00000015355	fmr1	66	88.060	Amphiprion_percula
ENSPREG00000014149	fmr1	99	85.250	ENSATEG00000017772	fmr1	65	86.500	Anabas_testudineus
ENSPREG00000014149	fmr1	65	56.522	ENSAPLG00000003811	FMR1	50	88.793	Anas_platyrhynchos
ENSPREG00000014149	fmr1	92	53.472	ENSACAG00000007899	FMR1	50	87.931	Anolis_carolinensis
ENSPREG00000014149	fmr1	85	87.069	ENSANAG00000026715	FMR1	50	87.069	Aotus_nancymaae
ENSPREG00000014149	fmr1	99	86.935	ENSACLG00000021559	fmr1	65	89.447	Astatotilapia_calliptera
ENSPREG00000014149	fmr1	99	66.749	ENSAMXG00000000371	fmr1	64	67.419	Astyanax_mexicanus
ENSPREG00000014149	fmr1	84	60.212	ENSBTAG00000012552	FMR1	51	87.069	Bos_taurus
ENSPREG00000014149	fmr1	85	87.069	ENSCJAG00000003925	FMR1	60	59.452	Callithrix_jacchus
ENSPREG00000014149	fmr1	65	67.000	ENSCAFG00020024366	FMR1	51	87.069	Canis_lupus_dingo
ENSPREG00000014149	fmr1	88	78.788	ENSCHIG00000000198	FMR1	50	87.069	Capra_hircus
ENSPREG00000014149	fmr1	88	62.286	ENSTSYG00000014392	FMR1	56	63.314	Carlito_syrichta
ENSPREG00000014149	fmr1	76	45.706	ENSCAPG00000008575	FMR1	51	82.857	Cavia_aperea
ENSPREG00000014149	fmr1	88	51.106	ENSCPOG00000003723	FMR1	51	87.069	Cavia_porcellus
ENSPREG00000014149	fmr1	85	87.069	ENSCCAG00000021737	FMR1	59	60.212	Cebus_capucinus
ENSPREG00000014149	fmr1	88	59.640	ENSCATG00000038319	FMR1	57	87.069	Cercocebus_atys
ENSPREG00000014149	fmr1	63	87.069	ENSCLAG00000001233	FMR1	50	87.069	Chinchilla_lanigera
ENSPREG00000014149	fmr1	88	59.640	ENSCSAG00000007281	FMR1	59	60.212	Chlorocebus_sabaeus
ENSPREG00000014149	fmr1	66	87.952	ENSCHOG00000006340	-	59	87.952	Choloepus_hoffmanni
ENSPREG00000014149	fmr1	99	60.652	ENSCPBG00000020840	FMR1	56	66.766	Chrysemys_picta_bellii
ENSPREG00000014149	fmr1	88	62.571	ENSCANG00000033482	FMR1	56	63.314	Colobus_angolensis_palliatus
ENSPREG00000014149	fmr1	85	87.069	ENSCGRG00001012567	Fmr1	59	59.178	Cricetulus_griseus_chok1gshd
ENSPREG00000014149	fmr1	85	86.207	ENSCGRG00000005009	Fmr1	50	86.207	Cricetulus_griseus_crigri
ENSPREG00000014149	fmr1	99	76.790	ENSCSEG00000016308	fmr1	64	76.296	Cynoglossus_semilaevis
ENSPREG00000014149	fmr1	99	87.626	ENSCVAG00000011644	fmr1	70	88.636	Cyprinodon_variegatus
ENSPREG00000014149	fmr1	99	65.327	ENSDARG00000037433	fmr1	63	66.165	Danio_rerio
ENSPREG00000014149	fmr1	88	59.640	ENSDNOG00000019486	FMR1	59	60.212	Dasypus_novemcinctus
ENSPREG00000014149	fmr1	64	60.853	ENSDORG00000005853	Fxr1	53	62.016	Dipodomys_ordii
ENSPREG00000014149	fmr1	99	51.209	ENSDORG00000012501	Fmr1	55	87.069	Dipodomys_ordii
ENSPREG00000014149	fmr1	82	87.069	ENSEASG00005014017	FMR1	53	87.069	Equus_asinus_asinus
ENSPREG00000014149	fmr1	88	59.383	ENSECAG00000032767	FMR1	59	59.947	Equus_caballus
ENSPREG00000014149	fmr1	99	66.098	ENSELUG00000013325	fmr1	65	65.610	Esox_lucius
ENSPREG00000014149	fmr1	84	60.904	ENSFCAG00000007228	FMR1	59	59.947	Felis_catus
ENSPREG00000014149	fmr1	65	75.479	ENSFALG00000012085	FMR1	55	65.644	Ficedula_albicollis
ENSPREG00000014149	fmr1	85	87.069	ENSFDAG00000017613	FMR1	51	87.069	Fukomys_damarensis
ENSPREG00000014149	fmr1	99	93.955	ENSFHEG00000000636	fmr1	66	94.207	Fundulus_heteroclitus
ENSPREG00000014149	fmr1	87	69.075	ENSGMOG00000006141	fmr1	57	70.796	Gadus_morhua
ENSPREG00000014149	fmr1	65	75.096	ENSGALG00000009177	FMR1	55	65.846	Gallus_gallus
ENSPREG00000014149	fmr1	99	95.718	ENSGAFG00000015494	fmr1	61	95.718	Gambusia_affinis
ENSPREG00000014149	fmr1	99	77.468	ENSGACG00000018742	fmr1	63	75.879	Gasterosteus_aculeatus
ENSPREG00000014149	fmr1	99	60.652	ENSGAGG00000024559	FMR1	55	66.766	Gopherus_agassizii
ENSPREG00000014149	fmr1	99	58.291	ENSGGOG00000010373	FMR1	50	87.069	Gorilla_gorilla
ENSPREG00000014149	fmr1	99	86.935	ENSHBUG00000012534	fmr1	65	89.447	Haplochromis_burtoni
ENSPREG00000014149	fmr1	85	87.069	ENSHGLG00000000576	FMR1	59	59.840	Heterocephalus_glaber_female
ENSPREG00000014149	fmr1	85	87.069	ENSHGLG00100008323	FMR1	51	87.069	Heterocephalus_glaber_male
ENSPREG00000014149	fmr1	99	69.554	ENSHCOG00000004757	fmr1	64	71.216	Hippocampus_comes
ENSPREG00000014149	fmr1	99	64.573	ENSIPUG00000014418	fmr1-b	66	64.662	Ictalurus_punctatus
ENSPREG00000014149	fmr1	85	87.069	ENSSTOG00000003260	FMR1	59	59.682	Ictidomys_tridecemlineatus
ENSPREG00000014149	fmr1	64	60.465	ENSJJAG00000019175	Fxr1	50	57.588	Jaculus_jaculus
ENSPREG00000014149	fmr1	69	94.928	ENSKMAG00000006554	fmr1	54	94.624	Kryptolebias_marmoratus
ENSPREG00000014149	fmr1	99	78.856	ENSLBEG00000014381	fmr1	64	75.616	Labrus_bergylta
ENSPREG00000014149	fmr1	99	60.046	ENSLOCG00000015397	fmr1	66	61.609	Lepisosteus_oculatus
ENSPREG00000014149	fmr1	88	52.195	ENSLAFG00000013592	FMR1	50	87.069	Loxodonta_africana
ENSPREG00000014149	fmr1	88	59.640	ENSMFAG00000000241	FMR1	59	60.212	Macaca_fascicularis
ENSPREG00000014149	fmr1	88	62.571	ENSMMUG00000015814	FMR1	59	60.212	Macaca_mulatta
ENSPREG00000014149	fmr1	88	56.341	ENSMNEG00000024342	FMR1	60	54.712	Macaca_nemestrina
ENSPREG00000014149	fmr1	99	58.291	ENSMLEG00000035664	FMR1	56	87.069	Mandrillus_leucophaeus
ENSPREG00000014149	fmr1	98	82.382	ENSMAMG00000000787	fmr1	65	83.127	Mastacembelus_armatus
ENSPREG00000014149	fmr1	99	86.935	ENSMZEG00005005455	fmr1	65	89.447	Maylandia_zebra
ENSPREG00000014149	fmr1	92	62.264	ENSMGAG00000008270	FMR1	57	66.172	Meleagris_gallopavo
ENSPREG00000014149	fmr1	63	90.000	ENSMAUG00000005814	Fmr1	63	90.000	Mesocricetus_auratus
ENSPREG00000014149	fmr1	84	60.904	ENSMICG00000000838	FMR1	59	60.477	Microcebus_murinus
ENSPREG00000014149	fmr1	65	87.931	ENSMOCG00000005190	Fmr1	59	59.726	Microtus_ochrogaster
ENSPREG00000014149	fmr1	99	81.683	ENSMMOG00000010038	fmr1	67	81.454	Mola_mola
ENSPREG00000014149	fmr1	99	84.539	ENSMALG00000012587	fmr1	66	86.783	Monopterus_albus
ENSPREG00000014149	fmr1	96	87.069	MGP_CAROLIEiJ_G0033121	Fmr1	59	59.615	Mus_caroli
ENSPREG00000014149	fmr1	96	87.069	ENSMUSG00000000838	Fmr1	59	59.615	Mus_musculus
ENSPREG00000014149	fmr1	96	87.069	MGP_PahariEiJ_G0031663	Fmr1	59	59.341	Mus_pahari
ENSPREG00000014149	fmr1	96	87.069	MGP_SPRETEiJ_G0034275	Fmr1	59	59.615	Mus_spretus
ENSPREG00000014149	fmr1	99	48.908	ENSNGAG00000020908	Fmr1	50	87.069	Nannospalax_galili
ENSPREG00000014149	fmr1	75	89.474	ENSNBRG00000022213	fmr1	57	92.434	Neolamprologus_brichardi
ENSPREG00000014149	fmr1	88	62.571	ENSNLEG00000013269	FMR1	56	63.609	Nomascus_leucogenys
ENSPREG00000014149	fmr1	85	87.069	ENSODEG00000008377	FMR1	51	87.069	Octodon_degus
ENSPREG00000014149	fmr1	99	86.432	ENSONIG00000015823	fmr1	65	88.945	Oreochromis_niloticus
ENSPREG00000014149	fmr1	81	57.772	ENSOANG00000001097	FMR1	51	88.793	Ornithorhynchus_anatinus
ENSPREG00000014149	fmr1	99	84.461	ENSORLG00000009094	fmr1	65	84.211	Oryzias_latipes
ENSPREG00000014149	fmr1	99	84.673	ENSORLG00020020254	fmr1	65	83.417	Oryzias_latipes_hni
ENSPREG00000014149	fmr1	99	84.712	ENSORLG00015015300	fmr1	65	83.709	Oryzias_latipes_hsok
ENSPREG00000014149	fmr1	99	82.663	ENSOMEG00000017281	fmr1	65	85.930	Oryzias_melastigma
ENSPREG00000014149	fmr1	65	67.333	ENSPPAG00000041836	FMR1	59	59.726	Pan_paniscus
ENSPREG00000014149	fmr1	84	60.904	ENSPPRG00000018962	FMR1	59	59.947	Panthera_pardus
ENSPREG00000014149	fmr1	82	66.463	ENSPTIG00000019115	FMR1	53	87.069	Panthera_tigris_altaica
ENSPREG00000014149	fmr1	99	53.275	ENSPTRG00000022349	FMR1	58	53.050	Pan_troglodytes
ENSPREG00000014149	fmr1	88	62.571	ENSPANG00000018447	FMR1	50	87.069	Papio_anubis
ENSPREG00000014149	fmr1	99	65.750	ENSPKIG00000001628	fmr1	64	67.750	Paramormyrops_kingsleyae
ENSPREG00000014149	fmr1	99	60.150	ENSPSIG00000009079	FMR1	56	66.172	Pelodiscus_sinensis
ENSPREG00000014149	fmr1	65	87.069	ENSPEMG00000017439	Fmr1	59	59.178	Peromyscus_maniculatus_bairdii
ENSPREG00000014149	fmr1	84	67.456	ENSPCIG00000022498	FMR1	51	87.931	Phascolarctos_cinereus
ENSPREG00000014149	fmr1	99	97.243	ENSPFOG00000004138	fmr1	66	97.243	Poecilia_formosa
ENSPREG00000014149	fmr1	99	96.977	ENSPLAG00000005126	fmr1	66	96.977	Poecilia_latipinna
ENSPREG00000014149	fmr1	99	97.243	ENSPMEG00000003164	fmr1	66	97.243	Poecilia_mexicana
ENSPREG00000014149	fmr1	88	62.286	ENSPCOG00000028651	FMR1	59	60.477	Propithecus_coquereli
ENSPREG00000014149	fmr1	99	75.439	ENSPNYG00000000045	fmr1	62	74.813	Pundamilia_nyererei
ENSPREG00000014149	fmr1	99	67.494	ENSPNAG00000006251	fmr1	63	67.419	Pygocentrus_nattereri
ENSPREG00000014149	fmr1	63	87.069	ENSRNOG00000057464	Fmr1	58	56.319	Rattus_norvegicus
ENSPREG00000014149	fmr1	82	64.848	ENSRBIG00000028998	FMR1	52	86.555	Rhinopithecus_bieti
ENSPREG00000014149	fmr1	88	62.571	ENSRROG00000044396	FMR1	50	87.069	Rhinopithecus_roxellana
ENSPREG00000014149	fmr1	84	60.904	ENSSBOG00000026623	FMR1	59	59.947	Saimiri_boliviensis_boliviensis
ENSPREG00000014149	fmr1	99	65.500	ENSSFOG00015004051	fmr1	63	65.000	Scleropages_formosus
ENSPREG00000014149	fmr1	68	85.646	ENSSMAG00000013698	fmr1	52	86.700	Scophthalmus_maximus
ENSPREG00000014149	fmr1	99	83.709	ENSSLDG00000022042	fmr1	59	93.868	Seriola_lalandi_dorsalis
ENSPREG00000014149	fmr1	82	86.207	ENSSARG00000003475	FMR1	51	86.207	Sorex_araneus
ENSPREG00000014149	fmr1	65	74.713	ENSSPUG00000014177	FMR1	57	65.644	Sphenodon_punctatus
ENSPREG00000014149	fmr1	99	88.614	ENSSPAG00000005758	fmr1	66	90.594	Stegastes_partitus
ENSPREG00000014149	fmr1	84	60.638	ENSSSCG00000012727	FMR1	57	87.069	Sus_scrofa
ENSPREG00000014149	fmr1	65	66.443	ENSTGUG00000004735	FMR1	53	62.739	Taeniopygia_guttata
ENSPREG00000014149	fmr1	99	60.506	ENSTRUG00000005362	fmr1	62	57.037	Takifugu_rubripes
ENSPREG00000014149	fmr1	54	66.204	ENSTNIG00000002152	-	93	66.210	Tetraodon_nigroviridis
ENSPREG00000014149	fmr1	99	59.950	ENSTNIG00000010121	fmr1	63	59.158	Tetraodon_nigroviridis
ENSPREG00000014149	fmr1	99	48.690	ENSTTRG00000000613	FMR1	52	87.069	Tursiops_truncatus
ENSPREG00000014149	fmr1	88	65.714	ENSUAMG00000013787	FMR1	50	87.069	Ursus_americanus
ENSPREG00000014149	fmr1	84	59.347	ENSUMAG00000009869	FMR1	59	54.645	Ursus_maritimus
ENSPREG00000014149	fmr1	88	50.488	ENSVPAG00000008700	FMR1	50	87.069	Vicugna_pacos
ENSPREG00000014149	fmr1	88	59.383	ENSVVUG00000000753	FMR1	52	87.069	Vulpes_vulpes
ENSPREG00000014149	fmr1	99	59.950	ENSXETG00000019647	fmr1	56	65.588	Xenopus_tropicalis
ENSPREG00000014149	fmr1	75	95.033	ENSXCOG00000013342	fmr1	58	95.033	Xiphophorus_couchianus
ENSPREG00000014149	fmr1	99	96.222	ENSXMAG00000000827	fmr1	65	96.222	Xiphophorus_maculatus