EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000014269 (Gene tree)
Gene ID: 103479314
Gene Symbol: rab11bb
Alias: zgc:92772
Full Name: ras-related protein Rab-11B
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 6528 bases
Position: chrLG17:11710818-11717345
Accession: 103479314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000021092	MMR_HSR1	PF01926.23	3.2e-07	1	1
ENSPREP00000021098	MMR_HSR1	PF01926.23	4.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000021323	-	663	-	ENSPREP00000021098	220 (aa)	-	-
ENSPRET00000021317	-	657	XM_008433678	ENSPREP00000021092	218 (aa)	XP_008431900	UPI0000364045

Gene Model

Click here to download ENSPREG00000014269's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000014269's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000014269	rab11bb	76	43.373	ENSPREG00000010284	rab15	78	43.373
ENSPREG00000014269	rab11bb	76	52.410	ENSPREG00000003616	rab1ba	83	52.410
ENSPREG00000014269	rab11bb	80	46.591	ENSPREG00000009597	-	83	46.591
ENSPREG00000014269	rab11bb	82	38.587	ENSPREG00000003221	rab33a	53	38.587
ENSPREG00000014269	rab11bb	96	39.524	ENSPREG00000014634	rab30	97	39.524
ENSPREG00000014269	rab11bb	74	30.061	ENSPREG00000012803	rhebl1	88	30.061
ENSPREG00000014269	rab11bb	99	81.106	ENSPREG00000017324	rab11al	99	81.106
ENSPREG00000014269	rab11bb	94	33.495	ENSPREG00000006363	rras	95	33.495
ENSPREG00000014269	rab11bb	53	30.252	ENSPREG00000011615	arl4d	58	30.252
ENSPREG00000014269	rab11bb	56	30.303	ENSPREG00000021699	-	65	30.303
ENSPREG00000014269	rab11bb	78	30.055	ENSPREG00000006055	rasl11a	71	30.055
ENSPREG00000014269	rab11bb	78	39.884	ENSPREG00000007017	zgc:101559	74	39.884
ENSPREG00000014269	rab11bb	96	39.713	ENSPREG00000005323	si:dkey-16l2.16	98	39.713
ENSPREG00000014269	rab11bb	75	47.239	ENSPREG00000010146	rab5c	74	47.239
ENSPREG00000014269	rab11bb	77	33.929	ENSPREG00000019341	hrasb	92	35.000
ENSPREG00000014269	rab11bb	72	37.580	ENSPREG00000021505	rab6a	75	37.580
ENSPREG00000014269	rab11bb	73	33.125	ENSPREG00000010752	rheb	88	32.716
ENSPREG00000014269	rab11bb	66	36.111	ENSPREG00000022509	rab23	79	35.583
ENSPREG00000014269	rab11bb	74	41.317	ENSPREG00000012522	-	83	41.317
ENSPREG00000014269	rab11bb	100	97.248	ENSPREG00000006336	-	100	97.248
ENSPREG00000014269	rab11bb	72	36.943	ENSPREG00000009535	RAB41	74	36.943
ENSPREG00000014269	rab11bb	96	43.602	ENSPREG00000017517	zgc:171927	99	43.602
ENSPREG00000014269	rab11bb	72	40.491	ENSPREG00000017750	RAB7A	78	40.491
ENSPREG00000014269	rab11bb	81	32.222	ENSPREG00000022241	si:dkey-13a21.4	87	32.222
ENSPREG00000014269	rab11bb	68	34.667	ENSPREG00000018287	KRAS	85	35.802
ENSPREG00000014269	rab11bb	78	44.767	ENSPREG00000005923	rab18a	70	44.767
ENSPREG00000014269	rab11bb	74	49.068	ENSPREG00000017567	rab13	80	49.686
ENSPREG00000014269	rab11bb	100	94.954	ENSPREG00000006357	rab11ba	78	94.954
ENSPREG00000014269	rab11bb	76	42.353	ENSPREG00000006970	rab9b	77	42.353
ENSPREG00000014269	rab11bb	73	30.723	ENSPREG00000017010	rasd4	77	30.909
ENSPREG00000014269	rab11bb	77	54.386	ENSPREG00000010154	rab4a	80	54.386
ENSPREG00000014269	rab11bb	72	40.491	ENSPREG00000012148	RAB7A	78	40.491
ENSPREG00000014269	rab11bb	79	46.552	ENSPREG00000007129	RAB39B	82	46.552
ENSPREG00000014269	rab11bb	78	38.043	ENSPREG00000000880	rab33ba	77	38.043
ENSPREG00000014269	rab11bb	99	63.134	ENSPREG00000006119	rab25a	90	75.676
ENSPREG00000014269	rab11bb	82	32.984	ENSPREG00000020276	RAB29	91	32.984
ENSPREG00000014269	rab11bb	75	30.636	ENSPREG00000019386	rasl11b	71	30.726
ENSPREG00000014269	rab11bb	77	36.471	ENSPREG00000014761	rabl2	80	36.471
ENSPREG00000014269	rab11bb	66	43.333	ENSPREG00000001864	-	65	43.333
ENSPREG00000014269	rab11bb	84	41.398	ENSPREG00000013962	rab42a	85	41.398
ENSPREG00000014269	rab11bb	74	34.356	ENSPREG00000016102	si:ch73-116o1.2	82	35.795
ENSPREG00000014269	rab11bb	77	30.233	ENSPREG00000010228	dnajc27	88	30.233
ENSPREG00000014269	rab11bb	100	62.844	ENSPREG00000017337	rab25b	100	62.844
ENSPREG00000014269	rab11bb	74	43.478	ENSPREG00000010920	rab22a	83	43.478
ENSPREG00000014269	rab11bb	73	44.025	ENSPREG00000019783	RAB15	76	44.025
ENSPREG00000014269	rab11bb	76	52.410	ENSPREG00000004889	-	79	52.410
ENSPREG00000014269	rab11bb	72	41.615	ENSPREG00000001832	rab9a	79	41.615
ENSPREG00000014269	rab11bb	72	35.669	ENSPREG00000015480	rab6ba	78	35.669
ENSPREG00000014269	rab11bb	55	30.645	ENSPREG00000015645	arl4cb	62	30.645
ENSPREG00000014269	rab11bb	77	46.707	ENSPREG00000022167	-	79	48.701
ENSPREG00000014269	rab11bb	100	87.156	ENSPREG00000009605	rab11a	100	87.156
ENSPREG00000014269	rab11bb	77	51.786	ENSPREG00000017344	-	78	51.786
ENSPREG00000014269	rab11bb	96	45.283	ENSPREG00000020321	rab1ab	99	45.283
ENSPREG00000014269	rab11bb	78	54.386	ENSPREG00000014888	rab2a	81	54.386
ENSPREG00000014269	rab11bb	80	41.899	ENSPREG00000017487	rab12	83	38.426

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000014269	rab11bb	100	100.000	ENSAPOG00000023455	rab11bb	100	100.000	Acanthochromis_polyacanthus
ENSPREG00000014269	rab11bb	100	97.706	ENSACIG00000024376	-	100	97.706	Amphilophus_citrinellus
ENSPREG00000014269	rab11bb	100	87.156	ENSACIG00000019631	rab11bb	100	87.156	Amphilophus_citrinellus
ENSPREG00000014269	rab11bb	100	97.706	ENSAOCG00000018849	-	100	97.706	Amphiprion_ocellaris
ENSPREG00000014269	rab11bb	100	100.000	ENSAOCG00000018239	rab11bb	100	100.000	Amphiprion_ocellaris
ENSPREG00000014269	rab11bb	100	100.000	ENSAPEG00000016590	rab11bb	100	100.000	Amphiprion_percula
ENSPREG00000014269	rab11bb	100	98.165	ENSATEG00000023725	-	100	98.165	Anabas_testudineus
ENSPREG00000014269	rab11bb	100	100.000	ENSATEG00000017696	rab11bb	100	100.000	Anabas_testudineus
ENSPREG00000014269	rab11bb	94	98.058	ENSAPLG00000011046	-	96	96.651	Anas_platyrhynchos
ENSPREG00000014269	rab11bb	100	100.000	ENSACLG00000007076	rab11bb	100	100.000	Astatotilapia_calliptera
ENSPREG00000014269	rab11bb	100	97.706	ENSACLG00000005446	-	100	97.706	Astatotilapia_calliptera
ENSPREG00000014269	rab11bb	100	98.624	ENSAMXG00000042655	rab11bb	100	98.624	Astyanax_mexicanus
ENSPREG00000014269	rab11bb	100	96.789	ENSAMXG00000037623	-	100	96.789	Astyanax_mexicanus
ENSPREG00000014269	rab11bb	100	96.330	ENSBTAG00000002475	RAB11B	100	96.330	Bos_taurus
ENSPREG00000014269	rab11bb	96	94.787	ENSCHIG00000022426	-	94	94.787	Capra_hircus
ENSPREG00000014269	rab11bb	100	96.330	ENSCATG00000029188	-	100	96.330	Cercocebus_atys
ENSPREG00000014269	rab11bb	100	97.248	ENSCPBG00000017056	-	100	97.248	Chrysemys_picta_bellii
ENSPREG00000014269	rab11bb	100	100.000	ENSCSEG00000012149	rab11bb	100	100.000	Cynoglossus_semilaevis
ENSPREG00000014269	rab11bb	100	97.248	ENSCSEG00000007239	-	100	97.248	Cynoglossus_semilaevis
ENSPREG00000014269	rab11bb	100	94.495	ENSCVAG00000019751	-	100	94.495	Cyprinodon_variegatus
ENSPREG00000014269	rab11bb	100	100.000	ENSCVAG00000017021	-	100	100.000	Cyprinodon_variegatus
ENSPREG00000014269	rab11bb	100	96.789	ENSCVAG00000019718	-	100	96.789	Cyprinodon_variegatus
ENSPREG00000014269	rab11bb	100	98.165	ENSDARG00000090086	rab11bb	100	98.165	Danio_rerio
ENSPREG00000014269	rab11bb	99	94.931	ENSETEG00000000905	-	99	94.931	Echinops_telfairi
ENSPREG00000014269	rab11bb	99	94.884	ENSEASG00005003708	-	99	94.884	Equus_asinus_asinus
ENSPREG00000014269	rab11bb	99	94.884	ENSECAG00000000716	RAB11B	99	94.884	Equus_caballus
ENSPREG00000014269	rab11bb	100	98.165	ENSELUG00000021148	rab11bb	100	98.165	Esox_lucius
ENSPREG00000014269	rab11bb	100	96.330	ENSELUG00000020948	-	98	100.000	Esox_lucius
ENSPREG00000014269	rab11bb	100	95.413	ENSELUG00000000916	-	100	95.413	Esox_lucius
ENSPREG00000014269	rab11bb	100	97.248	ENSFALG00000011828	-	100	97.248	Ficedula_albicollis
ENSPREG00000014269	rab11bb	100	100.000	ENSFHEG00000018353	rab11bb	100	100.000	Fundulus_heteroclitus
ENSPREG00000014269	rab11bb	100	98.165	ENSFHEG00000022676	-	100	98.165	Fundulus_heteroclitus
ENSPREG00000014269	rab11bb	99	93.519	ENSGMOG00000009668	-	99	93.519	Gadus_morhua
ENSPREG00000014269	rab11bb	100	99.541	ENSGMOG00000009211	rab11bb	100	99.541	Gadus_morhua
ENSPREG00000014269	rab11bb	100	97.248	ENSGALG00000000613	RAB11B	100	97.248	Gallus_gallus
ENSPREG00000014269	rab11bb	100	100.000	ENSGAFG00000007102	rab11bb	100	100.000	Gambusia_affinis
ENSPREG00000014269	rab11bb	100	99.541	ENSGACG00000015479	rab11bb	100	99.541	Gasterosteus_aculeatus
ENSPREG00000014269	rab11bb	100	94.495	ENSGACG00000013297	-	99	94.495	Gasterosteus_aculeatus
ENSPREG00000014269	rab11bb	100	96.330	ENSGGOG00000014516	RAB11B	100	96.330	Gorilla_gorilla
ENSPREG00000014269	rab11bb	100	97.706	ENSHBUG00000009947	-	100	97.706	Haplochromis_burtoni
ENSPREG00000014269	rab11bb	100	100.000	ENSHBUG00000014777	rab11bb	100	100.000	Haplochromis_burtoni
ENSPREG00000014269	rab11bb	100	93.578	ENSHCOG00000000985	-	100	93.578	Hippocampus_comes
ENSPREG00000014269	rab11bb	100	99.541	ENSHCOG00000002423	rab11bb	100	99.541	Hippocampus_comes
ENSPREG00000014269	rab11bb	100	95.413	ENSHCOG00000000954	-	100	95.413	Hippocampus_comes
ENSPREG00000014269	rab11bb	100	97.248	ENSIPUG00000025100	rab11b	100	97.248	Ictalurus_punctatus
ENSPREG00000014269	rab11bb	100	99.083	ENSIPUG00000019927	rab11bb	100	99.083	Ictalurus_punctatus
ENSPREG00000014269	rab11bb	100	97.706	ENSKMAG00000006170	-	100	97.706	Kryptolebias_marmoratus
ENSPREG00000014269	rab11bb	100	100.000	ENSKMAG00000009033	rab11bb	100	100.000	Kryptolebias_marmoratus
ENSPREG00000014269	rab11bb	100	96.789	ENSLBEG00000004172	-	100	96.789	Labrus_bergylta
ENSPREG00000014269	rab11bb	100	89.450	ENSLBEG00000005981	-	100	89.450	Labrus_bergylta
ENSPREG00000014269	rab11bb	100	99.541	ENSLBEG00000015248	rab11bb	100	99.541	Labrus_bergylta
ENSPREG00000014269	rab11bb	100	97.248	ENSLACG00000016857	-	100	97.248	Latimeria_chalumnae
ENSPREG00000014269	rab11bb	100	96.330	ENSMFAG00000003654	RAB11B	100	96.330	Macaca_fascicularis
ENSPREG00000014269	rab11bb	100	96.330	ENSMLEG00000030601	-	100	96.330	Mandrillus_leucophaeus
ENSPREG00000014269	rab11bb	100	99.541	ENSMAMG00000006378	rab11bb	100	99.541	Mastacembelus_armatus
ENSPREG00000014269	rab11bb	100	96.789	ENSMAMG00000018533	-	100	96.789	Mastacembelus_armatus
ENSPREG00000014269	rab11bb	100	97.706	ENSMZEG00005010975	-	100	97.706	Maylandia_zebra
ENSPREG00000014269	rab11bb	100	100.000	ENSMZEG00005003352	rab11bb	100	100.000	Maylandia_zebra
ENSPREG00000014269	rab11bb	100	96.330	ENSMICG00000034065	-	100	96.330	Microcebus_murinus
ENSPREG00000014269	rab11bb	100	97.706	ENSMMOG00000001250	-	100	97.706	Mola_mola
ENSPREG00000014269	rab11bb	99	95.853	ENSMMOG00000001238	-	99	95.853	Mola_mola
ENSPREG00000014269	rab11bb	94	100.000	ENSMMOG00000007917	rab11bb	100	100.000	Mola_mola
ENSPREG00000014269	rab11bb	100	97.248	ENSMODG00000003841	-	100	97.248	Monodelphis_domestica
ENSPREG00000014269	rab11bb	100	100.000	ENSMALG00000022187	rab11bb	100	100.000	Monopterus_albus
ENSPREG00000014269	rab11bb	94	87.923	ENSMLUG00000006677	-	100	87.923	Myotis_lucifugus
ENSPREG00000014269	rab11bb	100	100.000	ENSNBRG00000000372	rab11bb	100	100.000	Neolamprologus_brichardi
ENSPREG00000014269	rab11bb	100	97.706	ENSNBRG00000023885	-	100	97.706	Neolamprologus_brichardi
ENSPREG00000014269	rab11bb	100	97.248	ENSMEUG00000003686	-	100	97.248	Notamacropus_eugenii
ENSPREG00000014269	rab11bb	100	100.000	ENSONIG00000010435	rab11bb	100	100.000	Oreochromis_niloticus
ENSPREG00000014269	rab11bb	100	97.706	ENSONIG00000002544	-	100	97.706	Oreochromis_niloticus
ENSPREG00000014269	rab11bb	52	94.737	ENSOANG00000031567	-	78	99.074	Ornithorhynchus_anatinus
ENSPREG00000014269	rab11bb	99	95.853	ENSORLG00000015284	-	72	95.853	Oryzias_latipes
ENSPREG00000014269	rab11bb	100	99.541	ENSORLG00000013938	rab11bb	100	99.541	Oryzias_latipes
ENSPREG00000014269	rab11bb	100	99.541	ENSORLG00020019393	rab11bb	100	99.541	Oryzias_latipes_hni
ENSPREG00000014269	rab11bb	99	95.853	ENSORLG00020020844	RAB11B	99	95.853	Oryzias_latipes_hni
ENSPREG00000014269	rab11bb	100	99.541	ENSORLG00015020173	rab11bb	100	99.541	Oryzias_latipes_hsok
ENSPREG00000014269	rab11bb	99	95.853	ENSORLG00015016999	RAB11B	99	95.853	Oryzias_latipes_hsok
ENSPREG00000014269	rab11bb	100	96.789	ENSOMEG00000002562	-	100	96.789	Oryzias_melastigma
ENSPREG00000014269	rab11bb	100	100.000	ENSOMEG00000017806	-	100	100.000	Oryzias_melastigma
ENSPREG00000014269	rab11bb	100	96.330	ENSPPAG00000028589	-	100	96.330	Pan_paniscus
ENSPREG00000014269	rab11bb	100	96.330	ENSPTRG00000010422	RAB11B	100	96.330	Pan_troglodytes
ENSPREG00000014269	rab11bb	100	96.330	ENSPANG00000007765	-	100	96.330	Papio_anubis
ENSPREG00000014269	rab11bb	98	97.196	ENSPKIG00000001389	-	69	97.196	Paramormyrops_kingsleyae
ENSPREG00000014269	rab11bb	100	98.624	ENSPKIG00000011703	-	100	98.624	Paramormyrops_kingsleyae
ENSPREG00000014269	rab11bb	100	99.083	ENSPKIG00000011640	rab11bb	100	99.083	Paramormyrops_kingsleyae
ENSPREG00000014269	rab11bb	98	93.151	ENSPSIG00000010242	-	85	93.151	Pelodiscus_sinensis
ENSPREG00000014269	rab11bb	100	100.000	ENSPMGG00000009435	rab11bb	100	100.000	Periophthalmus_magnuspinnatus
ENSPREG00000014269	rab11bb	100	96.789	ENSPMGG00000014333	-	100	96.789	Periophthalmus_magnuspinnatus
ENSPREG00000014269	rab11bb	99	93.088	ENSPMGG00000014336	-	99	93.088	Periophthalmus_magnuspinnatus
ENSPREG00000014269	rab11bb	97	95.755	ENSPCIG00000020371	-	99	95.755	Phascolarctos_cinereus
ENSPREG00000014269	rab11bb	100	100.000	ENSPFOG00000024114	-	100	100.000	Poecilia_formosa
ENSPREG00000014269	rab11bb	100	97.706	ENSPFOG00000006224	-	100	97.706	Poecilia_formosa
ENSPREG00000014269	rab11bb	100	97.706	ENSPLAG00000014207	-	100	97.706	Poecilia_latipinna
ENSPREG00000014269	rab11bb	100	100.000	ENSPLAG00000001598	rab11bb	100	100.000	Poecilia_latipinna
ENSPREG00000014269	rab11bb	100	97.706	ENSPMEG00000007842	-	100	97.706	Poecilia_mexicana
ENSPREG00000014269	rab11bb	100	100.000	ENSPMEG00000012389	rab11bb	100	100.000	Poecilia_mexicana
ENSPREG00000014269	rab11bb	100	97.706	ENSPNYG00000019611	-	100	97.706	Pundamilia_nyererei
ENSPREG00000014269	rab11bb	100	100.000	ENSPNYG00000004098	rab11bb	100	100.000	Pundamilia_nyererei
ENSPREG00000014269	rab11bb	100	96.330	ENSRROG00000037812	-	100	96.330	Rhinopithecus_roxellana
ENSPREG00000014269	rab11bb	97	96.226	ENSSHAG00000006816	-	97	96.226	Sarcophilus_harrisii
ENSPREG00000014269	rab11bb	100	97.706	ENSSFOG00015009042	rab11bb	100	97.706	Scleropages_formosus
ENSPREG00000014269	rab11bb	100	75.229	ENSSFOG00015006245	-	100	75.229	Scleropages_formosus
ENSPREG00000014269	rab11bb	100	99.541	ENSSMAG00000004922	rab11bb	100	99.541	Scophthalmus_maximus
ENSPREG00000014269	rab11bb	100	94.954	ENSSMAG00000018613	-	100	94.954	Scophthalmus_maximus
ENSPREG00000014269	rab11bb	100	97.706	ENSSDUG00000002934	-	100	97.706	Seriola_dumerili
ENSPREG00000014269	rab11bb	100	100.000	ENSSDUG00000013558	rab11bb	100	100.000	Seriola_dumerili
ENSPREG00000014269	rab11bb	100	97.706	ENSSLDG00000005275	-	100	97.706	Seriola_lalandi_dorsalis
ENSPREG00000014269	rab11bb	100	100.000	ENSSLDG00000020676	rab11bb	100	100.000	Seriola_lalandi_dorsalis
ENSPREG00000014269	rab11bb	100	96.789	ENSSPUG00000002243	-	100	96.789	Sphenodon_punctatus
ENSPREG00000014269	rab11bb	100	97.706	ENSSPAG00000014559	-	100	97.706	Stegastes_partitus
ENSPREG00000014269	rab11bb	100	100.000	ENSSPAG00000011419	rab11bb	100	100.000	Stegastes_partitus
ENSPREG00000014269	rab11bb	100	97.248	ENSTGUG00000000084	-	100	97.248	Taeniopygia_guttata
ENSPREG00000014269	rab11bb	99	97.685	ENSTRUG00000021619	-	100	97.685	Takifugu_rubripes
ENSPREG00000014269	rab11bb	99	94.931	ENSTRUG00000021614	-	99	94.931	Takifugu_rubripes
ENSPREG00000014269	rab11bb	100	100.000	ENSTRUG00000022029	rab11bb	100	100.000	Takifugu_rubripes
ENSPREG00000014269	rab11bb	99	97.685	ENSTNIG00000013182	-	100	97.685	Tetraodon_nigroviridis
ENSPREG00000014269	rab11bb	99	94.470	ENSTNIG00000013184	-	99	94.470	Tetraodon_nigroviridis
ENSPREG00000014269	rab11bb	100	98.624	ENSTNIG00000011081	rab11bb	100	98.624	Tetraodon_nigroviridis
ENSPREG00000014269	rab11bb	93	96.552	ENSTNIG00000002003	-	100	96.552	Tetraodon_nigroviridis
ENSPREG00000014269	rab11bb	94	97.073	ENSUAMG00000006639	-	99	97.073	Ursus_americanus
ENSPREG00000014269	rab11bb	100	97.260	ENSXETG00000025484	rab11b.1	99	97.260	Xenopus_tropicalis
ENSPREG00000014269	rab11bb	100	97.706	ENSXCOG00000009190	-	100	97.706	Xiphophorus_couchianus
ENSPREG00000014269	rab11bb	100	100.000	ENSXCOG00000008042	-	100	100.000	Xiphophorus_couchianus
ENSPREG00000014269	rab11bb	100	100.000	ENSXMAG00000011926	rab11bb	100	100.000	Xiphophorus_maculatus
ENSPREG00000014269	rab11bb	100	97.248	ENSXMAG00000024840	-	100	97.248	Xiphophorus_maculatus