EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000014287 (Gene tree)
Gene ID: 103466007
Gene Symbol: rbm28
Alias: zgc:56258
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 147142 bases
Position: chrLG6:13317754-13464895
Accession: 103466007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000021140	RRM_1	PF00076.22	2.8e-59	1	3
ENSPREP00000021140	RRM_1	PF00076.22	2.8e-59	2	3
ENSPREP00000021140	RRM_1	PF00076.22	2.8e-59	3	3
ENSPREP00000021123	RRM_1	PF00076.22	6.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000021365	-	7172	XM_008411266	ENSPREP00000021140	760 (aa)	XP_008409488	-
ENSPRET00000021348	-	6692	-	ENSPREP00000021123	600 (aa)	-	-

Gene Model

Click here to download ENSPREG00000014287's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000014287's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000014287	rbm28	98	48.575	ENSG00000106344	RBM28	100	46.569	Homo_sapiens
ENSPREG00000014287	rbm28	73	73.227	ENSAPOG00000015512	rbm28	58	72.991	Acanthochromis_polyacanthus
ENSPREG00000014287	rbm28	96	58.242	ENSAMEG00000004776	RBM28	65	58.974	Ailuropoda_melanoleuca
ENSPREG00000014287	rbm28	69	70.913	ENSACIG00000023153	rbm28	89	70.913	Amphilophus_citrinellus
ENSPREG00000014287	rbm28	73	72.540	ENSAOCG00000000462	rbm28	58	72.321	Amphiprion_ocellaris
ENSPREG00000014287	rbm28	73	72.311	ENSAPEG00000012996	rbm28	99	65.793	Amphiprion_percula
ENSPREG00000014287	rbm28	74	64.076	ENSATEG00000001672	rbm28	61	63.808	Anabas_testudineus
ENSPREG00000014287	rbm28	88	65.000	ENSANAG00000033922	RBM28	76	65.000	Aotus_nancymaae
ENSPREG00000014287	rbm28	99	63.472	ENSACLG00000025024	rbm28	59	71.523	Astatotilapia_calliptera
ENSPREG00000014287	rbm28	72	61.982	ENSAMXG00000000763	rbm28	97	61.982	Astyanax_mexicanus
ENSPREG00000014287	rbm28	88	65.000	ENSBTAG00000017001	RBM28	79	65.000	Bos_taurus
ENSPREG00000014287	rbm28	98	49.737	ENSCJAG00000017731	RBM28	75	65.000	Callithrix_jacchus
ENSPREG00000014287	rbm28	98	48.501	ENSCAFG00000001667	RBM28	56	56.250	Canis_familiaris
ENSPREG00000014287	rbm28	98	48.501	ENSCAFG00020021648	RBM28	56	56.250	Canis_lupus_dingo
ENSPREG00000014287	rbm28	78	53.205	ENSCHIG00000014146	RBM28	57	54.670	Capra_hircus
ENSPREG00000014287	rbm28	76	53.744	ENSTSYG00000002892	RBM28	76	62.500	Carlito_syrichta
ENSPREG00000014287	rbm28	83	38.365	ENSCAPG00000013218	RBM28	95	38.226	Cavia_aperea
ENSPREG00000014287	rbm28	77	53.165	ENSCPOG00000006253	RBM28	56	55.102	Cavia_porcellus
ENSPREG00000014287	rbm28	77	65.000	ENSCCAG00000035105	RBM28	75	65.000	Cebus_capucinus
ENSPREG00000014287	rbm28	98	49.612	ENSCATG00000040497	RBM28	78	65.000	Cercocebus_atys
ENSPREG00000014287	rbm28	98	47.294	ENSCLAG00000003707	RBM28	59	55.378	Chinchilla_lanigera
ENSPREG00000014287	rbm28	98	48.249	ENSCSAG00000010161	RBM28	56	54.943	Chlorocebus_sabaeus
ENSPREG00000014287	rbm28	56	57.600	ENSCHOG00000001994	-	63	57.600	Choloepus_hoffmanni
ENSPREG00000014287	rbm28	67	49.333	ENSCPBG00000018088	RBM28	81	51.079	Chrysemys_picta_bellii
ENSPREG00000014287	rbm28	56	44.675	ENSCSAVG00000007149	-	94	43.787	Ciona_savignyi
ENSPREG00000014287	rbm28	89	51.024	ENSCANG00000038397	RBM28	75	65.000	Colobus_angolensis_palliatus
ENSPREG00000014287	rbm28	79	53.053	ENSCGRG00001021278	Rbm28	55	55.251	Cricetulus_griseus_chok1gshd
ENSPREG00000014287	rbm28	79	53.053	ENSCGRG00000005098	Rbm28	56	55.251	Cricetulus_griseus_crigri
ENSPREG00000014287	rbm28	99	59.921	ENSCSEG00000004212	rbm28	59	68.468	Cynoglossus_semilaevis
ENSPREG00000014287	rbm28	76	82.405	ENSCVAG00000010493	rbm28	99	76.042	Cyprinodon_variegatus
ENSPREG00000014287	rbm28	99	49.372	ENSDARG00000025332	rbm28	99	50.628	Danio_rerio
ENSPREG00000014287	rbm28	98	49.803	ENSDNOG00000001124	RBM28	56	55.149	Dasypus_novemcinctus
ENSPREG00000014287	rbm28	79	51.025	ENSDORG00000004184	Rbm28	84	54.279	Dipodomys_ordii
ENSPREG00000014287	rbm28	92	34.286	FBgn0260456	CG4806	66	37.124	Drosophila_melanogaster
ENSPREG00000014287	rbm28	98	45.093	ENSETEG00000007130	RBM28	54	49.398	Echinops_telfairi
ENSPREG00000014287	rbm28	98	38.172	ENSEBUG00000004419	rbm28	58	43.560	Eptatretus_burgeri
ENSPREG00000014287	rbm28	80	51.951	ENSEASG00005008528	RBM28	55	55.530	Equus_asinus_asinus
ENSPREG00000014287	rbm28	80	51.440	ENSECAG00000007745	RBM28	55	54.965	Equus_caballus
ENSPREG00000014287	rbm28	98	47.513	ENSEEUG00000002389	RBM28	82	59.091	Erinaceus_europaeus
ENSPREG00000014287	rbm28	99	55.247	ENSELUG00000020602	rbm28	59	60.475	Esox_lucius
ENSPREG00000014287	rbm28	98	49.802	ENSFCAG00000000946	RBM28	80	65.000	Felis_catus
ENSPREG00000014287	rbm28	98	50.065	ENSFDAG00000010169	RBM28	57	54.751	Fukomys_damarensis
ENSPREG00000014287	rbm28	73	60.227	ENSGMOG00000007091	rbm28	60	59.955	Gadus_morhua
ENSPREG00000014287	rbm28	75	91.982	ENSGAFG00000004802	rbm28	98	91.982	Gambusia_affinis
ENSPREG00000014287	rbm28	72	70.115	ENSGACG00000012612	rbm28	74	69.595	Gasterosteus_aculeatus
ENSPREG00000014287	rbm28	71	63.187	ENSGAGG00000008873	RBM28	89	58.173	Gopherus_agassizii
ENSPREG00000014287	rbm28	93	47.678	ENSGGOG00000004644	RBM28	57	54.943	Gorilla_gorilla
ENSPREG00000014287	rbm28	94	65.698	ENSHBUG00000009611	rbm28	98	64.681	Haplochromis_burtoni
ENSPREG00000014287	rbm28	98	49.738	ENSHGLG00000005409	RBM28	57	53.968	Heterocephalus_glaber_female
ENSPREG00000014287	rbm28	98	49.738	ENSHGLG00100016458	RBM28	57	53.968	Heterocephalus_glaber_male
ENSPREG00000014287	rbm28	83	57.143	ENSHCOG00000010597	rbm28	84	57.143	Hippocampus_comes
ENSPREG00000014287	rbm28	81	43.813	ENSIPUG00000007103	rbm28	79	47.887	Ictalurus_punctatus
ENSPREG00000014287	rbm28	81	52.236	ENSSTOG00000002169	RBM28	56	54.402	Ictidomys_tridecemlineatus
ENSPREG00000014287	rbm28	69	52.983	ENSJJAG00000022400	Rbm28	57	53.957	Jaculus_jaculus
ENSPREG00000014287	rbm28	75	72.991	ENSKMAG00000013348	rbm28	99	67.275	Kryptolebias_marmoratus
ENSPREG00000014287	rbm28	74	69.575	ENSLBEG00000012998	rbm28	99	62.135	Labrus_bergylta
ENSPREG00000014287	rbm28	99	47.170	ENSLOCG00000015541	rbm28	75	60.674	Lepisosteus_oculatus
ENSPREG00000014287	rbm28	98	49.674	ENSLAFG00000010717	RBM28	56	54.965	Loxodonta_africana
ENSPREG00000014287	rbm28	98	47.933	ENSMFAG00000031036	RBM28	78	65.000	Macaca_fascicularis
ENSPREG00000014287	rbm28	98	47.871	ENSMMUG00000007250	RBM28	77	65.000	Macaca_mulatta
ENSPREG00000014287	rbm28	98	50.132	ENSMNEG00000036970	RBM28	77	65.000	Macaca_nemestrina
ENSPREG00000014287	rbm28	76	50.312	ENSMLEG00000037717	RBM28	52	51.709	Mandrillus_leucophaeus
ENSPREG00000014287	rbm28	99	66.319	ENSMAMG00000008525	rbm28	99	65.274	Mastacembelus_armatus
ENSPREG00000014287	rbm28	93	62.031	ENSMZEG00005019625	rbm28	63	71.523	Maylandia_zebra
ENSPREG00000014287	rbm28	82	48.302	ENSMAUG00000002263	Rbm28	55	54.670	Mesocricetus_auratus
ENSPREG00000014287	rbm28	80	51.434	ENSMICG00000000107	RBM28	58	55.427	Microcebus_murinus
ENSPREG00000014287	rbm28	98	49.803	ENSMOCG00000014615	Rbm28	57	55.430	Microtus_ochrogaster
ENSPREG00000014287	rbm28	73	65.604	ENSMMOG00000008600	rbm28	89	65.533	Mola_mola
ENSPREG00000014287	rbm28	77	54.255	ENSMODG00000015151	RBM28	56	56.849	Monodelphis_domestica
ENSPREG00000014287	rbm28	74	69.575	ENSMALG00000006419	rbm28	99	63.001	Monopterus_albus
ENSPREG00000014287	rbm28	98	50.132	MGP_CAROLIEiJ_G0028162	Rbm28	57	55.275	Mus_caroli
ENSPREG00000014287	rbm28	98	50.398	ENSMUSG00000029701	Rbm28	57	55.581	Mus_musculus
ENSPREG00000014287	rbm28	98	50.132	MGP_PahariEiJ_G0021920	Rbm28	57	55.530	Mus_pahari
ENSPREG00000014287	rbm28	98	50.067	MGP_SPRETEiJ_G0029162	Rbm28	57	55.275	Mus_spretus
ENSPREG00000014287	rbm28	98	49.153	ENSMPUG00000006511	RBM28	56	55.936	Mustela_putorius_furo
ENSPREG00000014287	rbm28	79	53.222	ENSMLUG00000002186	RBM28	56	55.505	Myotis_lucifugus
ENSPREG00000014287	rbm28	99	47.718	ENSNGAG00000017946	-	56	52.715	Nannospalax_galili
ENSPREG00000014287	rbm28	99	49.215	ENSNGAG00000006480	-	58	54.730	Nannospalax_galili
ENSPREG00000014287	rbm28	67	65.000	ENSNLEG00000012307	RBM28	77	65.000	Nomascus_leucogenys
ENSPREG00000014287	rbm28	81	57.595	ENSMEUG00000009611	RBM28	82	57.862	Notamacropus_eugenii
ENSPREG00000014287	rbm28	79	49.897	ENSODEG00000003213	-	55	52.632	Octodon_degus
ENSPREG00000014287	rbm28	76	55.362	ENSODEG00000013217	-	82	56.853	Octodon_degus
ENSPREG00000014287	rbm28	75	72.185	ENSONIG00000014924	rbm28	58	72.627	Oreochromis_niloticus
ENSPREG00000014287	rbm28	98	44.757	ENSOANG00000000815	-	57	49.433	Ornithorhynchus_anatinus
ENSPREG00000014287	rbm28	79	53.430	ENSOCUG00000003009	RBM28	56	55.530	Oryctolagus_cuniculus
ENSPREG00000014287	rbm28	99	64.351	ENSORLG00000009636	rbm28	58	70.000	Oryzias_latipes
ENSPREG00000014287	rbm28	78	70.264	ENSORLG00020002123	rbm28	85	70.264	Oryzias_latipes_hni
ENSPREG00000014287	rbm28	85	69.458	ENSORLG00015015030	rbm28	99	69.608	Oryzias_latipes_hsok
ENSPREG00000014287	rbm28	74	71.938	ENSOMEG00000007801	rbm28	57	73.645	Oryzias_melastigma
ENSPREG00000014287	rbm28	80	51.745	ENSOGAG00000006011	RBM28	74	62.500	Otolemur_garnettii
ENSPREG00000014287	rbm28	98	49.806	ENSOARG00000002547	RBM28	57	54.607	Ovis_aries
ENSPREG00000014287	rbm28	98	48.062	ENSPPAG00000041730	RBM28	78	65.000	Pan_paniscus
ENSPREG00000014287	rbm28	98	50.728	ENSPPRG00000004420	RBM28	80	65.000	Panthera_pardus
ENSPREG00000014287	rbm28	98	49.934	ENSPTIG00000008550	RBM28	80	65.000	Panthera_tigris_altaica
ENSPREG00000014287	rbm28	98	48.191	ENSPTRG00000019659	RBM28	78	65.000	Pan_troglodytes
ENSPREG00000014287	rbm28	98	48.143	ENSPANG00000022295	RBM28	77	65.000	Papio_anubis
ENSPREG00000014287	rbm28	98	54.545	ENSPKIG00000023453	rbm28	98	53.652	Paramormyrops_kingsleyae
ENSPREG00000014287	rbm28	83	65.155	ENSPMGG00000012840	rbm28	92	65.155	Periophthalmus_magnuspinnatus
ENSPREG00000014287	rbm28	98	48.800	ENSPEMG00000020673	Rbm28	59	55.682	Peromyscus_maniculatus_bairdii
ENSPREG00000014287	rbm28	98	49.867	ENSPCIG00000012810	RBM28	98	50.266	Phascolarctos_cinereus
ENSPREG00000014287	rbm28	99	91.265	ENSPFOG00000018209	rbm28	99	91.339	Poecilia_formosa
ENSPREG00000014287	rbm28	99	93.316	ENSPLAG00000016078	rbm28	96	91.350	Poecilia_latipinna
ENSPREG00000014287	rbm28	99	91.134	ENSPMEG00000004292	rbm28	99	91.933	Poecilia_mexicana
ENSPREG00000014287	rbm28	98	48.571	ENSPPYG00000017975	RBM28	56	54.713	Pongo_abelii
ENSPREG00000014287	rbm28	73	51.667	ENSPCAG00000008223	RBM28	82	51.499	Procavia_capensis
ENSPREG00000014287	rbm28	69	65.000	ENSPCOG00000016797	RBM28	74	65.000	Propithecus_coquereli
ENSPREG00000014287	rbm28	69	61.290	ENSPVAG00000005443	RBM28	65	64.179	Pteropus_vampyrus
ENSPREG00000014287	rbm28	99	63.777	ENSPNYG00000014003	rbm28	59	71.523	Pundamilia_nyererei
ENSPREG00000014287	rbm28	98	49.467	ENSRNOG00000005468	Rbm28	85	54.587	Rattus_norvegicus
ENSPREG00000014287	rbm28	98	48.761	ENSRBIG00000033990	RBM28	75	65.000	Rhinopithecus_bieti
ENSPREG00000014287	rbm28	98	48.258	ENSRROG00000040747	RBM28	75	65.000	Rhinopithecus_roxellana
ENSPREG00000014287	rbm28	94	49.041	ENSSHAG00000017017	RBM28	59	55.809	Sarcophilus_harrisii
ENSPREG00000014287	rbm28	98	53.262	ENSSFOG00015001231	rbm28	58	59.404	Scleropages_formosus
ENSPREG00000014287	rbm28	74	64.967	ENSSMAG00000003885	rbm28	90	64.901	Scophthalmus_maximus
ENSPREG00000014287	rbm28	84	68.452	ENSSDUG00000014270	rbm28	87	72.788	Seriola_dumerili
ENSPREG00000014287	rbm28	75	71.840	ENSSLDG00000020099	rbm28	58	71.903	Seriola_lalandi_dorsalis
ENSPREG00000014287	rbm28	74	57.487	ENSSARG00000008303	RBM28	80	56.391	Sorex_araneus
ENSPREG00000014287	rbm28	72	51.826	ENSSPUG00000000838	RBM28	80	51.584	Sphenodon_punctatus
ENSPREG00000014287	rbm28	73	71.719	ENSSPAG00000023305	rbm28	61	72.000	Stegastes_partitus
ENSPREG00000014287	rbm28	98	50.065	ENSSSCG00000031847	RBM28	57	55.506	Sus_scrofa
ENSPREG00000014287	rbm28	75	64.238	ENSTRUG00000013311	rbm28	99	59.331	Takifugu_rubripes
ENSPREG00000014287	rbm28	99	57.560	ENSTNIG00000017962	rbm28	59	66.593	Tetraodon_nigroviridis
ENSPREG00000014287	rbm28	70	54.430	ENSTBEG00000012749	RBM28	82	53.550	Tupaia_belangeri
ENSPREG00000014287	rbm28	98	48.698	ENSTTRG00000013647	RBM28	87	54.464	Tursiops_truncatus
ENSPREG00000014287	rbm28	98	45.372	ENSUAMG00000006949	RBM28	58	50.457	Ursus_americanus
ENSPREG00000014287	rbm28	98	48.691	ENSUMAG00000005997	RBM28	56	54.943	Ursus_maritimus
ENSPREG00000014287	rbm28	83	45.540	ENSVPAG00000008304	RBM28	59	49.195	Vicugna_pacos
ENSPREG00000014287	rbm28	98	48.819	ENSVVUG00000007270	RBM28	56	55.889	Vulpes_vulpes
ENSPREG00000014287	rbm28	77	50.511	ENSXETG00000009271	rbm28	57	52.772	Xenopus_tropicalis
ENSPREG00000014287	rbm28	85	78.906	ENSXCOG00000020357	rbm28	91	86.517	Xiphophorus_couchianus
ENSPREG00000014287	rbm28	99	90.250	ENSXMAG00000004415	rbm28	74	88.121	Xiphophorus_maculatus