EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000014298 (Gene tree)
Gene ID: 103459608
Gene Symbol: apex1
Alias: hm:zehn1532|wu:fc13d11|zap1|zgc:66204
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 1262 bases
Position: chrLG23:14796811-14798072
Accession: 103459608
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000021137	Exo_endo_phos	PF03372.23	4.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000021362	-	936	XM_008401322	ENSPREP00000021137	311 (aa)	XP_008399544	-

Gene Model

Click here to download ENSPREG00000014298's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000014298's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000014298	apex1	99	66.456	ENSG00000100823	APEX1	88	71.326	Homo_sapiens
ENSPREG00000014298	apex1	99	88.710	ENSAPOG00000017002	apex1	100	88.710	Acanthochromis_polyacanthus
ENSPREG00000014298	apex1	99	66.772	ENSAMEG00000005418	APEX1	88	71.685	Ailuropoda_melanoleuca
ENSPREG00000014298	apex1	89	90.614	ENSACIG00000010653	apex1	95	90.714	Amphilophus_citrinellus
ENSPREG00000014298	apex1	99	88.387	ENSAOCG00000009649	apex1	100	88.387	Amphiprion_ocellaris
ENSPREG00000014298	apex1	99	88.710	ENSAPEG00000021453	apex1	100	88.710	Amphiprion_percula
ENSPREG00000014298	apex1	99	91.262	ENSATEG00000002883	apex1	97	91.262	Anabas_testudineus
ENSPREG00000014298	apex1	90	72.500	ENSACAG00000008099	APEX1	88	72.500	Anolis_carolinensis
ENSPREG00000014298	apex1	89	72.043	ENSANAG00000030117	APEX1	88	72.043	Aotus_nancymaae
ENSPREG00000014298	apex1	99	90.000	ENSACLG00000018441	apex1	100	90.000	Astatotilapia_calliptera
ENSPREG00000014298	apex1	99	84.516	ENSAMXG00000034699	apex1	99	84.194	Astyanax_mexicanus
ENSPREG00000014298	apex1	99	66.772	ENSBTAG00000002745	APEX1	88	71.685	Bos_taurus
ENSPREG00000014298	apex1	92	43.056	WBGene00001372	exo-3	92	45.113	Caenorhabditis_elegans
ENSPREG00000014298	apex1	89	72.043	ENSCJAG00000009726	APEX1	88	72.043	Callithrix_jacchus
ENSPREG00000014298	apex1	99	66.772	ENSCAFG00000032033	APEX1	88	72.043	Canis_familiaris
ENSPREG00000014298	apex1	53	59.412	ENSCAFG00020023002	-	74	68.421	Canis_lupus_dingo
ENSPREG00000014298	apex1	99	66.772	ENSCAFG00020014377	-	88	72.043	Canis_lupus_dingo
ENSPREG00000014298	apex1	99	66.772	ENSCHIG00000007298	-	88	71.685	Capra_hircus
ENSPREG00000014298	apex1	86	58.889	ENSCHIG00000014537	-	86	58.519	Capra_hircus
ENSPREG00000014298	apex1	99	66.562	ENSTSYG00000034813	APEX1	88	70.968	Carlito_syrichta
ENSPREG00000014298	apex1	87	65.818	ENSCAPG00000016235	APEX1	91	72.034	Cavia_aperea
ENSPREG00000014298	apex1	99	67.508	ENSCPOG00000030909	APEX1	88	72.043	Cavia_porcellus
ENSPREG00000014298	apex1	89	72.043	ENSCCAG00000033056	-	88	72.043	Cebus_capucinus
ENSPREG00000014298	apex1	99	58.544	ENSCCAG00000031931	-	87	62.366	Cebus_capucinus
ENSPREG00000014298	apex1	99	66.139	ENSCATG00000015580	APEX1	88	70.968	Cercocebus_atys
ENSPREG00000014298	apex1	99	67.192	ENSCLAG00000001002	APEX1	88	71.685	Chinchilla_lanigera
ENSPREG00000014298	apex1	99	66.456	ENSCSAG00000016685	-	88	71.326	Chlorocebus_sabaeus
ENSPREG00000014298	apex1	99	66.456	ENSCSAG00000016670	-	88	71.326	Chlorocebus_sabaeus
ENSPREG00000014298	apex1	99	70.570	ENSCPBG00000009567	APEX1	99	70.253	Chrysemys_picta_bellii
ENSPREG00000014298	apex1	94	57.045	ENSCING00000008137	-	85	60.300	Ciona_intestinalis
ENSPREG00000014298	apex1	95	51.186	ENSCSAVG00000007144	-	100	54.264	Ciona_savignyi
ENSPREG00000014298	apex1	99	66.772	ENSCANG00000030726	APEX1	99	66.772	Colobus_angolensis_palliatus
ENSPREG00000014298	apex1	99	65.079	ENSCGRG00001017046	Apex1	88	70.251	Cricetulus_griseus_chok1gshd
ENSPREG00000014298	apex1	99	65.079	ENSCGRG00000008984	Apex1	88	70.251	Cricetulus_griseus_crigri
ENSPREG00000014298	apex1	99	85.484	ENSCSEG00000017499	apex1	99	85.484	Cynoglossus_semilaevis
ENSPREG00000014298	apex1	99	91.935	ENSCVAG00000022075	apex1	100	91.935	Cyprinodon_variegatus
ENSPREG00000014298	apex1	100	83.601	ENSDARG00000045843	apex1	99	84.466	Danio_rerio
ENSPREG00000014298	apex1	99	64.353	ENSDNOG00000042234	APEX1	83	69.176	Dasypus_novemcinctus
ENSPREG00000014298	apex1	99	67.192	ENSDORG00000001616	Apex1	88	71.685	Dipodomys_ordii
ENSPREG00000014298	apex1	99	67.089	ENSETEG00000004855	-	88	72.043	Echinops_telfairi
ENSPREG00000014298	apex1	76	60.084	ENSEBUG00000000622	-	92	60.084	Eptatretus_burgeri
ENSPREG00000014298	apex1	99	67.823	ENSEASG00005017489	APEX1	65	72.401	Equus_asinus_asinus
ENSPREG00000014298	apex1	99	67.823	ENSECAG00000022325	APEX1	72	72.401	Equus_caballus
ENSPREG00000014298	apex1	86	71.747	ENSEEUG00000012569	APEX1	93	71.747	Erinaceus_europaeus
ENSPREG00000014298	apex1	99	82.258	ENSELUG00000021706	apex1	99	84.194	Esox_lucius
ENSPREG00000014298	apex1	99	68.139	ENSFCAG00000030869	APEX1	88	72.760	Felis_catus
ENSPREG00000014298	apex1	99	68.139	ENSFDAG00000006120	APEX1	88	72.760	Fukomys_damarensis
ENSPREG00000014298	apex1	100	90.675	ENSFHEG00000009031	apex1	84	90.675	Fundulus_heteroclitus
ENSPREG00000014298	apex1	99	75.806	ENSGMOG00000007943	apex1	99	75.806	Gadus_morhua
ENSPREG00000014298	apex1	99	95.484	ENSGAFG00000005311	apex1	100	95.484	Gambusia_affinis
ENSPREG00000014298	apex1	100	88.103	ENSGACG00000019497	apex1	99	91.353	Gasterosteus_aculeatus
ENSPREG00000014298	apex1	99	70.570	ENSGAGG00000014999	APEX1	99	70.253	Gopherus_agassizii
ENSPREG00000014298	apex1	99	66.139	ENSGGOG00000002128	APEX1	88	70.968	Gorilla_gorilla
ENSPREG00000014298	apex1	99	89.677	ENSHBUG00000005894	apex1	100	89.677	Haplochromis_burtoni
ENSPREG00000014298	apex1	99	68.770	ENSHGLG00000002848	APEX1	88	72.401	Heterocephalus_glaber_female
ENSPREG00000014298	apex1	99	68.770	ENSHGLG00100017878	APEX1	88	72.401	Heterocephalus_glaber_male
ENSPREG00000014298	apex1	99	85.852	ENSHCOG00000009961	apex1	100	85.852	Hippocampus_comes
ENSPREG00000014298	apex1	99	81.553	ENSIPUG00000005799	apex1	99	81.553	Ictalurus_punctatus
ENSPREG00000014298	apex1	99	67.089	ENSSTOG00000010096	APEX1	88	72.401	Ictidomys_tridecemlineatus
ENSPREG00000014298	apex1	99	66.454	ENSJJAG00000012067	-	88	70.968	Jaculus_jaculus
ENSPREG00000014298	apex1	99	59.306	ENSJJAG00000003660	-	88	62.724	Jaculus_jaculus
ENSPREG00000014298	apex1	89	63.082	ENSJJAG00000020465	-	90	63.082	Jaculus_jaculus
ENSPREG00000014298	apex1	99	90.645	ENSKMAG00000021171	apex1	100	90.645	Kryptolebias_marmoratus
ENSPREG00000014298	apex1	99	89.032	ENSLBEG00000010248	apex1	100	89.032	Labrus_bergylta
ENSPREG00000014298	apex1	99	72.293	ENSLACG00000008617	APEX1	89	76.786	Latimeria_chalumnae
ENSPREG00000014298	apex1	99	77.636	ENSLOCG00000015516	apex1	99	76.677	Lepisosteus_oculatus
ENSPREG00000014298	apex1	89	72.760	ENSLAFG00000021872	APEX1	88	72.760	Loxodonta_africana
ENSPREG00000014298	apex1	99	66.139	ENSMFAG00000002565	APEX1	88	70.968	Macaca_fascicularis
ENSPREG00000014298	apex1	99	66.139	ENSMMUG00000048039	APEX1	88	70.968	Macaca_mulatta
ENSPREG00000014298	apex1	99	66.139	ENSMNEG00000036944	APEX1	88	70.968	Macaca_nemestrina
ENSPREG00000014298	apex1	99	66.139	ENSMLEG00000042125	APEX1	88	70.968	Mandrillus_leucophaeus
ENSPREG00000014298	apex1	100	91.318	ENSMAMG00000023526	apex1	100	91.613	Mastacembelus_armatus
ENSPREG00000014298	apex1	99	90.000	ENSMZEG00005014187	apex1	100	90.000	Maylandia_zebra
ENSPREG00000014298	apex1	99	65.823	ENSMAUG00000013994	Apex1	88	69.892	Mesocricetus_auratus
ENSPREG00000014298	apex1	99	66.772	ENSMICG00000043554	APEX1	88	71.685	Microcebus_murinus
ENSPREG00000014298	apex1	99	66.562	ENSMOCG00000013721	Apex1	88	72.043	Microtus_ochrogaster
ENSPREG00000014298	apex1	100	85.256	ENSMMOG00000010031	apex1	97	85.256	Mola_mola
ENSPREG00000014298	apex1	89	69.892	ENSMODG00000007125	APEX1	87	69.892	Monodelphis_domestica
ENSPREG00000014298	apex1	90	83.571	ENSMALG00000011699	apex1	75	83.571	Monopterus_albus
ENSPREG00000014298	apex1	99	67.834	MGP_CAROLIEiJ_G0019209	Apex1	99	67.834	Mus_caroli
ENSPREG00000014298	apex1	99	67.302	ENSMUSG00000035960	Apex1	99	67.302	Mus_musculus
ENSPREG00000014298	apex1	99	67.302	MGP_PahariEiJ_G0030232	Apex1	99	67.302	Mus_pahari
ENSPREG00000014298	apex1	99	67.302	MGP_SPRETEiJ_G0020101	Apex1	99	67.302	Mus_spretus
ENSPREG00000014298	apex1	99	66.458	ENSMLUG00000028957	APEX1	87	71.326	Myotis_lucifugus
ENSPREG00000014298	apex1	87	55.396	ENSNGAG00000021748	-	72	57.917	Nannospalax_galili
ENSPREG00000014298	apex1	99	66.456	ENSNGAG00000002725	-	87	72.464	Nannospalax_galili
ENSPREG00000014298	apex1	100	89.389	ENSNBRG00000005334	apex1	92	89.389	Neolamprologus_brichardi
ENSPREG00000014298	apex1	99	66.139	ENSNLEG00000010839	APEX1	99	66.139	Nomascus_leucogenys
ENSPREG00000014298	apex1	99	65.176	ENSMEUG00000014519	APEX1	89	69.176	Notamacropus_eugenii
ENSPREG00000014298	apex1	99	67.089	ENSOPRG00000014029	APEX1	88	71.326	Ochotona_princeps
ENSPREG00000014298	apex1	99	67.823	ENSODEG00000001703	-	88	72.401	Octodon_degus
ENSPREG00000014298	apex1	99	52.012	ENSODEG00000006583	-	87	55.088	Octodon_degus
ENSPREG00000014298	apex1	90	56.272	ENSODEG00000004777	-	83	59.921	Octodon_degus
ENSPREG00000014298	apex1	99	89.677	ENSONIG00000012089	apex1	100	89.677	Oreochromis_niloticus
ENSPREG00000014298	apex1	88	70.182	ENSOANG00000008836	APEX1	68	70.182	Ornithorhynchus_anatinus
ENSPREG00000014298	apex1	99	67.089	ENSOCUG00000005022	APEX1	88	72.401	Oryctolagus_cuniculus
ENSPREG00000014298	apex1	99	90.354	ENSORLG00000012378	apex1	100	90.354	Oryzias_latipes
ENSPREG00000014298	apex1	99	90.354	ENSORLG00020021371	apex1	100	90.354	Oryzias_latipes_hni
ENSPREG00000014298	apex1	99	90.354	ENSORLG00015020089	apex1	100	90.354	Oryzias_latipes_hsok
ENSPREG00000014298	apex1	99	89.389	ENSOMEG00000018876	apex1	100	89.389	Oryzias_melastigma
ENSPREG00000014298	apex1	99	67.722	ENSOGAG00000013335	-	88	72.760	Otolemur_garnettii
ENSPREG00000014298	apex1	97	61.184	ENSOGAG00000029355	-	89	64.516	Otolemur_garnettii
ENSPREG00000014298	apex1	96	64.052	ENSOARG00000001876	-	87	68.773	Ovis_aries
ENSPREG00000014298	apex1	96	59.272	ENSOARG00000014424	-	89	60.573	Ovis_aries
ENSPREG00000014298	apex1	99	67.089	ENSOARG00000019740	-	88	72.043	Ovis_aries
ENSPREG00000014298	apex1	99	66.456	ENSPPAG00000038760	APEX1	89	71.326	Pan_paniscus
ENSPREG00000014298	apex1	99	67.405	ENSPPRG00000011794	APEX1	88	72.760	Panthera_pardus
ENSPREG00000014298	apex1	99	68.139	ENSPTIG00000014829	APEX1	88	72.760	Panthera_tigris_altaica
ENSPREG00000014298	apex1	99	66.456	ENSPTRG00000006093	APEX1	89	71.326	Pan_troglodytes
ENSPREG00000014298	apex1	99	66.139	ENSPANG00000022757	APEX1	88	70.968	Papio_anubis
ENSPREG00000014298	apex1	89	87.319	ENSPKIG00000003504	apex1	99	83.974	Paramormyrops_kingsleyae
ENSPREG00000014298	apex1	86	76.208	ENSPMGG00000016596	apex1	79	76.208	Periophthalmus_magnuspinnatus
ENSPREG00000014298	apex1	99	66.032	ENSPEMG00000019097	Apex1	88	71.326	Peromyscus_maniculatus_bairdii
ENSPREG00000014298	apex1	93	70.103	ENSPMAG00000007275	-	95	71.326	Petromyzon_marinus
ENSPREG00000014298	apex1	89	69.176	ENSPCIG00000023274	APEX1	87	69.176	Phascolarctos_cinereus
ENSPREG00000014298	apex1	99	97.419	ENSPFOG00000004178	apex1	100	97.419	Poecilia_formosa
ENSPREG00000014298	apex1	99	95.806	ENSPLAG00000012779	apex1	100	95.806	Poecilia_latipinna
ENSPREG00000014298	apex1	99	97.419	ENSPMEG00000019623	apex1	100	97.419	Poecilia_mexicana
ENSPREG00000014298	apex1	99	66.139	ENSPPYG00000005565	APEX1	88	70.968	Pongo_abelii
ENSPREG00000014298	apex1	99	64.557	ENSPCAG00000010376	APEX1	88	69.892	Procavia_capensis
ENSPREG00000014298	apex1	99	67.089	ENSPCOG00000021564	APEX1	99	67.089	Propithecus_coquereli
ENSPREG00000014298	apex1	99	66.038	ENSPVAG00000010736	APEX1	87	71.685	Pteropus_vampyrus
ENSPREG00000014298	apex1	99	90.000	ENSPNYG00000023940	apex1	100	90.000	Pundamilia_nyererei
ENSPREG00000014298	apex1	92	84.615	ENSPNAG00000020897	apex1	96	84.561	Pygocentrus_nattereri
ENSPREG00000014298	apex1	99	66.667	ENSRNOG00000009663	Apex1	88	72.043	Rattus_norvegicus
ENSPREG00000014298	apex1	99	66.456	ENSRBIG00000038325	APEX1	87	71.326	Rhinopithecus_bieti
ENSPREG00000014298	apex1	99	60.645	ENSSBOG00000031372	-	91	63.799	Saimiri_boliviensis_boliviensis
ENSPREG00000014298	apex1	89	72.043	ENSSBOG00000018921	-	88	72.043	Saimiri_boliviensis_boliviensis
ENSPREG00000014298	apex1	100	62.857	ENSSHAG00000013524	APEX1	87	68.440	Sarcophilus_harrisii
ENSPREG00000014298	apex1	99	79.355	ENSSFOG00015001948	apex1	99	81.613	Scleropages_formosus
ENSPREG00000014298	apex1	99	85.714	ENSSMAG00000013348	apex1	100	86.032	Scophthalmus_maximus
ENSPREG00000014298	apex1	100	90.675	ENSSDUG00000016377	apex1	100	90.675	Seriola_dumerili
ENSPREG00000014298	apex1	99	90.645	ENSSLDG00000023005	apex1	100	90.645	Seriola_lalandi_dorsalis
ENSPREG00000014298	apex1	90	73.571	ENSSPUG00000000531	APEX1	94	73.477	Sphenodon_punctatus
ENSPREG00000014298	apex1	99	87.097	ENSSPAG00000000458	apex1	100	87.097	Stegastes_partitus
ENSPREG00000014298	apex1	95	40.264	ENSSSCG00000039705	-	86	42.322	Sus_scrofa
ENSPREG00000014298	apex1	99	67.089	ENSSSCG00000040060	-	99	67.089	Sus_scrofa
ENSPREG00000014298	apex1	76	57.872	ENSTGUG00000014378	APEX1	100	57.872	Taeniopygia_guttata
ENSPREG00000014298	apex1	100	82.166	ENSTRUG00000004268	apex1	95	83.121	Takifugu_rubripes
ENSPREG00000014298	apex1	99	83.548	ENSTNIG00000005778	apex1	100	83.548	Tetraodon_nigroviridis
ENSPREG00000014298	apex1	99	63.924	ENSTBEG00000006405	APEX1	88	68.817	Tupaia_belangeri
ENSPREG00000014298	apex1	76	71.064	ENSTTRG00000007860	APEX1	100	71.064	Tursiops_truncatus
ENSPREG00000014298	apex1	99	67.192	ENSUAMG00000010457	APEX1	88	71.685	Ursus_americanus
ENSPREG00000014298	apex1	99	67.192	ENSUMAG00000009178	APEX1	88	71.685	Ursus_maritimus
ENSPREG00000014298	apex1	76	66.809	ENSVPAG00000005083	APEX1	100	66.809	Vicugna_pacos
ENSPREG00000014298	apex1	99	66.772	ENSVVUG00000009010	APEX1	88	72.043	Vulpes_vulpes
ENSPREG00000014298	apex1	99	68.153	ENSXETG00000024773	apex1	99	67.834	Xenopus_tropicalis
ENSPREG00000014298	apex1	100	96.141	ENSXCOG00000015233	apex1	100	96.141	Xiphophorus_couchianus
ENSPREG00000014298	apex1	99	96.129	ENSXMAG00000006195	apex1	100	96.129	Xiphophorus_maculatus