EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000014420 (Gene tree)
Gene ID: 103478269
Gene Symbol: sall3a
Alias: -
Full Name: spalt like transcription factor 3
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 12848 bases
Position: chrLG16:26187227-26200074
Accession: 103478269
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000021321	zf-C2H2	PF00096.26	7.4e-22	1	4
ENSPREP00000021321	zf-C2H2	PF00096.26	7.4e-22	2	4
ENSPREP00000021321	zf-C2H2	PF00096.26	7.4e-22	3	4
ENSPREP00000021321	zf-C2H2	PF00096.26	7.4e-22	4	4
ENSPREP00000021321	zf-met	PF12874.7	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000021546	-	4434	XM_008431984	ENSPREP00000021321	1253 (aa)	XP_008430206	-

Gene Model

Click here to download ENSPREG00000014420's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000014420's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000014420	sall3a	62	46.784	ENSPREG00000015079	sall3b	91	42.033
ENSPREG00000014420	sall3a	92	79.412	ENSPREG00000006802	sall1a	85	79.412
ENSPREG00000014420	sall3a	78	63.462	ENSPREG00000021140	sall4	87	63.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000014420	sall3a	68	70.588	ENSG00000256463	SALL3	88	73.451	Homo_sapiens
ENSPREG00000014420	sall3a	95	49.917	ENSAPOG00000004264	sall3b	89	49.836	Acanthochromis_polyacanthus
ENSPREG00000014420	sall3a	93	87.976	ENSAPOG00000020922	sall3a	92	84.337	Acanthochromis_polyacanthus
ENSPREG00000014420	sall3a	66	63.265	ENSAMEG00000010206	SALL3	89	63.265	Ailuropoda_melanoleuca
ENSPREG00000014420	sall3a	69	58.207	ENSACIG00000019407	sall3b	86	58.101	Amphilophus_citrinellus
ENSPREG00000014420	sall3a	68	90.141	ENSACIG00000014041	sall3a	84	90.141	Amphilophus_citrinellus
ENSPREG00000014420	sall3a	95	49.672	ENSAOCG00000012779	sall3b	89	49.029	Amphiprion_ocellaris
ENSPREG00000014420	sall3a	93	87.135	ENSAOCG00000010863	sall3a	82	93.056	Amphiprion_ocellaris
ENSPREG00000014420	sall3a	99	86.846	ENSAPEG00000019278	sall3a	94	86.846	Amphiprion_percula
ENSPREG00000014420	sall3a	69	57.088	ENSAPEG00000018170	sall3b	86	56.522	Amphiprion_percula
ENSPREG00000014420	sall3a	95	88.564	ENSATEG00000024524	sall3a	82	97.436	Anabas_testudineus
ENSPREG00000014420	sall3a	61	58.312	ENSATEG00000004914	sall3b	90	51.221	Anabas_testudineus
ENSPREG00000014420	sall3a	93	61.538	ENSAPLG00000013214	SALL3	89	61.312	Anas_platyrhynchos
ENSPREG00000014420	sall3a	95	61.240	ENSACAG00000000478	SALL3	89	61.248	Anolis_carolinensis
ENSPREG00000014420	sall3a	62	57.252	ENSACLG00000001619	sall3b	90	50.081	Astatotilapia_calliptera
ENSPREG00000014420	sall3a	99	84.707	ENSACLG00000022451	sall3a	94	84.945	Astatotilapia_calliptera
ENSPREG00000014420	sall3a	54	65.957	ENSAMXG00000035442	sall3b	70	65.957	Astyanax_mexicanus
ENSPREG00000014420	sall3a	99	69.128	ENSAMXG00000011185	sall3a	83	81.333	Astyanax_mexicanus
ENSPREG00000014420	sall3a	98	69.643	ENSBTAG00000050200	SALL3	90	69.643	Bos_taurus
ENSPREG00000014420	sall3a	65	71.681	ENSCJAG00000007332	SALL3	88	71.681	Callithrix_jacchus
ENSPREG00000014420	sall3a	64	65.602	ENSCAFG00000000013	SALL3	87	59.193	Canis_familiaris
ENSPREG00000014420	sall3a	66	69.912	ENSCAFG00020015092	SALL3	87	69.912	Canis_lupus_dingo
ENSPREG00000014420	sall3a	65	69.643	ENSCHIG00000000145	SALL3	89	69.643	Capra_hircus
ENSPREG00000014420	sall3a	65	64.444	ENSTSYG00000028846	SALL3	83	64.487	Carlito_syrichta
ENSPREG00000014420	sall3a	78	72.566	ENSCAPG00000006496	SALL3	81	70.652	Cavia_aperea
ENSPREG00000014420	sall3a	93	57.420	ENSCPOG00000008546	SALL3	88	58.340	Cavia_porcellus
ENSPREG00000014420	sall3a	64	65.314	ENSCCAG00000034863	SALL3	59	66.282	Cebus_capucinus
ENSPREG00000014420	sall3a	67	72.566	ENSCATG00000029727	SALL3	88	72.566	Cercocebus_atys
ENSPREG00000014420	sall3a	65	72.566	ENSCSAG00000018244	SALL3	88	72.566	Chlorocebus_sabaeus
ENSPREG00000014420	sall3a	54	64.545	ENSCHOG00000013939	-	74	64.545	Choloepus_hoffmanni
ENSPREG00000014420	sall3a	98	77.876	ENSCPBG00000003657	SALL3	88	77.876	Chrysemys_picta_bellii
ENSPREG00000014420	sall3a	69	75.439	ENSCANG00000030302	SALL3	83	75.439	Colobus_angolensis_palliatus
ENSPREG00000014420	sall3a	98	72.566	ENSCGRG00001018203	Sall3	88	72.566	Cricetulus_griseus_chok1gshd
ENSPREG00000014420	sall3a	93	58.714	ENSCGRG00000017127	Sall3	88	58.719	Cricetulus_griseus_crigri
ENSPREG00000014420	sall3a	65	65.000	ENSCSEG00000009569	sall3b	83	65.000	Cynoglossus_semilaevis
ENSPREG00000014420	sall3a	95	86.739	ENSCSEG00000009058	sall3a	89	86.739	Cynoglossus_semilaevis
ENSPREG00000014420	sall3a	90	90.196	ENSCVAG00000017005	sall3b	91	70.115	Cyprinodon_variegatus
ENSPREG00000014420	sall3a	69	89.217	ENSCVAG00000009684	sall3a	83	89.624	Cyprinodon_variegatus
ENSPREG00000014420	sall3a	95	50.083	ENSDARG00000057586	sall3b	90	50.000	Danio_rerio
ENSPREG00000014420	sall3a	99	62.451	ENSDARG00000079613	sall3a	94	62.727	Danio_rerio
ENSPREG00000014420	sall3a	65	67.925	ENSDNOG00000025483	SALL3	88	64.565	Dasypus_novemcinctus
ENSPREG00000014420	sall3a	64	64.912	ENSDORG00000002702	Sall3	75	66.957	Dipodomys_ordii
ENSPREG00000014420	sall3a	68	61.538	ENSETEG00000001481	SALL3	79	61.538	Echinops_telfairi
ENSPREG00000014420	sall3a	95	60.248	ENSEASG00005002071	SALL3	89	59.587	Equus_asinus_asinus
ENSPREG00000014420	sall3a	95	60.331	ENSECAG00000015414	SALL3	89	59.752	Equus_caballus
ENSPREG00000014420	sall3a	95	50.570	ENSELUG00000009541	sall3b	90	50.734	Esox_lucius
ENSPREG00000014420	sall3a	96	73.676	ENSELUG00000020351	sall3a	94	71.584	Esox_lucius
ENSPREG00000014420	sall3a	98	67.593	ENSFCAG00000028839	SALL3	89	67.593	Felis_catus
ENSPREG00000014420	sall3a	95	61.488	ENSFALG00000013343	SALL3	89	61.020	Ficedula_albicollis
ENSPREG00000014420	sall3a	93	77.627	ENSGMOG00000006649	sall3a	89	77.384	Gadus_morhua
ENSPREG00000014420	sall3a	98	77.876	ENSGALG00000041404	SALL3	88	77.876	Gallus_gallus
ENSPREG00000014420	sall3a	93	92.550	ENSGAFG00000001581	sall3a	88	92.550	Gambusia_affinis
ENSPREG00000014420	sall3a	62	47.059	ENSGAFG00000014435	-	84	61.224	Gambusia_affinis
ENSPREG00000014420	sall3a	95	48.350	ENSGACG00000002533	sall3b	90	47.759	Gasterosteus_aculeatus
ENSPREG00000014420	sall3a	93	82.222	ENSGACG00000005503	sall3a	87	82.222	Gasterosteus_aculeatus
ENSPREG00000014420	sall3a	95	61.716	ENSGAGG00000000925	SALL3	89	61.755	Gopherus_agassizii
ENSPREG00000014420	sall3a	69	70.330	ENSGGOG00000008127	SALL3	88	73.451	Gorilla_gorilla
ENSPREG00000014420	sall3a	99	84.865	ENSHBUG00000004486	sall3a	94	85.103	Haplochromis_burtoni
ENSPREG00000014420	sall3a	69	57.323	ENSHBUG00000018127	sall3b	86	57.506	Haplochromis_burtoni
ENSPREG00000014420	sall3a	95	57.695	ENSHGLG00000000824	SALL3	89	58.189	Heterocephalus_glaber_female
ENSPREG00000014420	sall3a	71	65.598	ENSHGLG00100008694	SALL3	60	66.242	Heterocephalus_glaber_male
ENSPREG00000014420	sall3a	89	65.957	ENSHCOG00000004745	sall3b	52	65.957	Hippocampus_comes
ENSPREG00000014420	sall3a	90	86.555	ENSHCOG00000010423	sall3a	94	82.423	Hippocampus_comes
ENSPREG00000014420	sall3a	95	70.933	ENSIPUG00000003378	sall3	94	68.549	Ictalurus_punctatus
ENSPREG00000014420	sall3a	95	45.959	ENSIPUG00000003006	sall3b	90	46.819	Ictalurus_punctatus
ENSPREG00000014420	sall3a	95	58.892	ENSSTOG00000004145	SALL3	89	57.969	Ictidomys_tridecemlineatus
ENSPREG00000014420	sall3a	98	72.566	ENSJJAG00000014351	Sall3	88	72.566	Jaculus_jaculus
ENSPREG00000014420	sall3a	57	49.673	ENSKMAG00000012418	sall3b	89	44.103	Kryptolebias_marmoratus
ENSPREG00000014420	sall3a	95	91.137	ENSKMAG00000003846	sall3a	94	87.302	Kryptolebias_marmoratus
ENSPREG00000014420	sall3a	95	87.636	ENSLBEG00000005152	sall3a	94	83.981	Labrus_bergylta
ENSPREG00000014420	sall3a	69	57.179	ENSLBEG00000015706	sall3b	86	56.760	Labrus_bergylta
ENSPREG00000014420	sall3a	95	67.964	ENSLOCG00000007831	sall3a	89	67.133	Lepisosteus_oculatus
ENSPREG00000014420	sall3a	95	72.566	ENSLAFG00000013521	SALL3	89	72.566	Loxodonta_africana
ENSPREG00000014420	sall3a	80	72.566	ENSMFAG00000031402	SALL3	84	72.566	Macaca_fascicularis
ENSPREG00000014420	sall3a	69	56.637	ENSMAMG00000006101	sall3b	86	56.577	Mastacembelus_armatus
ENSPREG00000014420	sall3a	63	81.308	ENSMAMG00000001276	sall3a	88	76.528	Mastacembelus_armatus
ENSPREG00000014420	sall3a	62	57.125	ENSMZEG00005026224	sall3b	90	50.161	Maylandia_zebra
ENSPREG00000014420	sall3a	99	84.707	ENSMZEG00005007586	sall3a	94	84.945	Maylandia_zebra
ENSPREG00000014420	sall3a	95	61.405	ENSMGAG00000002297	SALL3	89	61.431	Meleagris_gallopavo
ENSPREG00000014420	sall3a	98	73.451	ENSMAUG00000011828	Sall3	88	73.451	Mesocricetus_auratus
ENSPREG00000014420	sall3a	64	73.214	ENSMICG00000017395	SALL3	83	73.214	Microcebus_murinus
ENSPREG00000014420	sall3a	95	58.601	ENSMOCG00000013205	Sall3	89	59.128	Microtus_ochrogaster
ENSPREG00000014420	sall3a	71	56.274	ENSMMOG00000014246	sall3b	86	55.867	Mola_mola
ENSPREG00000014420	sall3a	67	89.706	ENSMMOG00000003253	sall3a	84	89.706	Mola_mola
ENSPREG00000014420	sall3a	95	61.456	ENSMODG00000012231	SALL3	89	61.494	Monodelphis_domestica
ENSPREG00000014420	sall3a	61	56.331	ENSMALG00000015200	sall3b	90	47.615	Monopterus_albus
ENSPREG00000014420	sall3a	92	87.058	ENSMALG00000003343	sall3a	93	83.401	Monopterus_albus
ENSPREG00000014420	sall3a	95	59.653	MGP_CAROLIEiJ_G0022442	Sall3	89	60.066	Mus_caroli
ENSPREG00000014420	sall3a	95	59.323	ENSMUSG00000024565	Sall3	89	59.736	Mus_musculus
ENSPREG00000014420	sall3a	95	59.256	MGP_PahariEiJ_G0019170	Sall3	89	59.504	Mus_pahari
ENSPREG00000014420	sall3a	95	59.308	MGP_SPRETEiJ_G0023357	Sall3	89	59.555	Mus_spretus
ENSPREG00000014420	sall3a	81	59.827	ENSMPUG00000016646	SALL3	89	59.595	Mustela_putorius_furo
ENSPREG00000014420	sall3a	95	68.142	ENSMLUG00000010582	SALL3	88	68.142	Myotis_lucifugus
ENSPREG00000014420	sall3a	98	73.451	ENSNGAG00000023772	Sall3	89	73.451	Nannospalax_galili
ENSPREG00000014420	sall3a	69	57.702	ENSNBRG00000016034	sall3b	86	57.634	Neolamprologus_brichardi
ENSPREG00000014420	sall3a	92	85.085	ENSNBRG00000008974	sall3a	94	81.752	Neolamprologus_brichardi
ENSPREG00000014420	sall3a	69	70.330	ENSNLEG00000008217	SALL3	88	71.681	Nomascus_leucogenys
ENSPREG00000014420	sall3a	73	72.566	ENSODEG00000002692	SALL3	88	72.566	Octodon_degus
ENSPREG00000014420	sall3a	95	78.658	ENSONIG00000007305	sall3a	89	78.981	Oreochromis_niloticus
ENSPREG00000014420	sall3a	61	57.125	ENSONIG00000013791	sall3b	90	49.480	Oreochromis_niloticus
ENSPREG00000014420	sall3a	85	61.538	ENSOCUG00000004364	-	82	61.538	Oryctolagus_cuniculus
ENSPREG00000014420	sall3a	64	61.652	ENSOCUG00000029398	SALL3	86	57.467	Oryctolagus_cuniculus
ENSPREG00000014420	sall3a	99	82.157	ENSORLG00000020718	sall3a	94	82.474	Oryzias_latipes
ENSPREG00000014420	sall3a	85	65.957	ENSORLG00020015105	sall3b	81	65.957	Oryzias_latipes_hni
ENSPREG00000014420	sall3a	93	83.008	ENSORLG00020001794	sall3a	89	83.687	Oryzias_latipes_hni
ENSPREG00000014420	sall3a	76	70.000	ENSORLG00015005877	sall3b	97	65.957	Oryzias_latipes_hsok
ENSPREG00000014420	sall3a	93	83.078	ENSORLG00015018152	sall3a	94	80.242	Oryzias_latipes_hsok
ENSPREG00000014420	sall3a	95	86.538	ENSOMEG00000011390	sall3a	94	82.937	Oryzias_melastigma
ENSPREG00000014420	sall3a	72	65.487	ENSOARG00000004353	SALL3	80	65.487	Ovis_aries
ENSPREG00000014420	sall3a	71	65.909	ENSPPAG00000029586	-	84	66.667	Pan_paniscus
ENSPREG00000014420	sall3a	69	70.330	ENSPTRG00000010126	SALL3	85	70.330	Pan_troglodytes
ENSPREG00000014420	sall3a	65	71.681	ENSPANG00000006485	SALL3	88	71.681	Papio_anubis
ENSPREG00000014420	sall3a	80	75.472	ENSPKIG00000018271	SALL3	89	75.472	Paramormyrops_kingsleyae
ENSPREG00000014420	sall3a	95	68.029	ENSPKIG00000013427	sall3a	97	68.812	Paramormyrops_kingsleyae
ENSPREG00000014420	sall3a	93	60.895	ENSPSIG00000008556	SALL3	91	61.351	Pelodiscus_sinensis
ENSPREG00000014420	sall3a	67	59.615	ENSPMGG00000002913	sall3b	85	59.615	Periophthalmus_magnuspinnatus
ENSPREG00000014420	sall3a	95	80.466	ENSPMGG00000017042	sall3a	88	80.466	Periophthalmus_magnuspinnatus
ENSPREG00000014420	sall3a	98	73.451	ENSPEMG00000022799	Sall3	88	73.451	Peromyscus_maniculatus_bairdii
ENSPREG00000014420	sall3a	98	76.991	ENSPCIG00000002472	SALL3	90	76.991	Phascolarctos_cinereus
ENSPREG00000014420	sall3a	99	93.889	ENSPFOG00000019127	sall3a	94	93.889	Poecilia_formosa
ENSPREG00000014420	sall3a	62	47.613	ENSPFOG00000013292	sall3b	91	42.741	Poecilia_formosa
ENSPREG00000014420	sall3a	99	93.492	ENSPLAG00000018123	sall3a	94	93.492	Poecilia_latipinna
ENSPREG00000014420	sall3a	62	47.607	ENSPLAG00000013919	sall3b	91	42.904	Poecilia_latipinna
ENSPREG00000014420	sall3a	70	47.208	ENSPMEG00000023703	sall3b	86	47.462	Poecilia_mexicana
ENSPREG00000014420	sall3a	100	97.689	ENSPMEG00000014946	sall3a	100	97.689	Poecilia_mexicana
ENSPREG00000014420	sall3a	63	66.334	ENSPPYG00000009253	SALL3	88	57.819	Pongo_abelii
ENSPREG00000014420	sall3a	95	63.265	ENSPCAG00000006522	SALL3	89	72.566	Procavia_capensis
ENSPREG00000014420	sall3a	72	73.214	ENSPCOG00000012553	SALL3	83	73.214	Propithecus_coquereli
ENSPREG00000014420	sall3a	95	67.857	ENSPVAG00000014645	SALL3	89	50.000	Pteropus_vampyrus
ENSPREG00000014420	sall3a	92	85.085	ENSPNYG00000012783	sall3a	89	85.339	Pundamilia_nyererei
ENSPREG00000014420	sall3a	69	57.323	ENSPNYG00000005353	sall3b	86	57.506	Pundamilia_nyererei
ENSPREG00000014420	sall3a	95	48.569	ENSPNAG00000017141	sall3b	90	48.657	Pygocentrus_nattereri
ENSPREG00000014420	sall3a	83	73.451	ENSRNOG00000026116	Sall3	84	73.451	Rattus_norvegicus
ENSPREG00000014420	sall3a	66	73.451	ENSRBIG00000036190	SALL3	61	73.451	Rhinopithecus_bieti
ENSPREG00000014420	sall3a	72	73.451	ENSRROG00000034130	SALL3	83	73.451	Rhinopithecus_roxellana
ENSPREG00000014420	sall3a	66	70.588	ENSSBOG00000023380	SALL3	84	70.588	Saimiri_boliviensis_boliviensis
ENSPREG00000014420	sall3a	95	61.175	ENSSHAG00000015872	SALL3	89	61.772	Sarcophilus_harrisii
ENSPREG00000014420	sall3a	92	66.150	ENSSFOG00015012223	sall3a	84	92.857	Scleropages_formosus
ENSPREG00000014420	sall3a	76	78.788	ENSSFOG00015009159	SALL3	82	67.500	Scleropages_formosus
ENSPREG00000014420	sall3a	61	56.943	ENSSMAG00000019762	sall3b	90	49.879	Scophthalmus_maximus
ENSPREG00000014420	sall3a	95	88.103	ENSSMAG00000007674	sall3a	89	88.186	Scophthalmus_maximus
ENSPREG00000014420	sall3a	95	86.000	ENSSDUG00000011099	sall3a	94	82.595	Seriola_dumerili
ENSPREG00000014420	sall3a	68	58.809	ENSSDUG00000010584	sall3b	86	58.249	Seriola_dumerili
ENSPREG00000014420	sall3a	95	85.917	ENSSLDG00000012706	sall3a	94	82.516	Seriola_lalandi_dorsalis
ENSPREG00000014420	sall3a	62	58.726	ENSSLDG00000016800	sall3b	90	51.261	Seriola_lalandi_dorsalis
ENSPREG00000014420	sall3a	89	95.327	ENSSPAG00000013114	sall3a	94	90.472	Stegastes_partitus
ENSPREG00000014420	sall3a	67	57.806	ENSSPAG00000003172	sall3b	86	57.197	Stegastes_partitus
ENSPREG00000014420	sall3a	98	68.750	ENSSSCG00000004858	SALL3	90	68.750	Sus_scrofa
ENSPREG00000014420	sall3a	93	58.067	ENSTGUG00000006541	SALL3	88	57.943	Taeniopygia_guttata
ENSPREG00000014420	sall3a	52	65.217	ENSTRUG00000003369	sall3b	61	65.217	Takifugu_rubripes
ENSPREG00000014420	sall3a	65	93.023	ENSTRUG00000017423	sall3a	83	93.023	Takifugu_rubripes
ENSPREG00000014420	sall3a	63	81.099	ENSTNIG00000001257	sall3a	100	78.712	Tetraodon_nigroviridis
ENSPREG00000014420	sall3a	90	64.444	ENSTBEG00000008964	SALL3	74	63.043	Tupaia_belangeri
ENSPREG00000014420	sall3a	66	70.435	ENSTTRG00000004958	SALL3	73	70.435	Tursiops_truncatus
ENSPREG00000014420	sall3a	98	69.912	ENSUAMG00000016908	SALL3	89	69.912	Ursus_americanus
ENSPREG00000014420	sall3a	63	85.714	ENSVVUG00000018838	SALL3	84	80.645	Vulpes_vulpes
ENSPREG00000014420	sall3a	99	57.870	ENSXETG00000000845	sall3	94	57.653	Xenopus_tropicalis
ENSPREG00000014420	sall3a	67	48.529	ENSXCOG00000018799	sall3b	86	61.224	Xiphophorus_couchianus
ENSPREG00000014420	sall3a	93	87.510	ENSXCOG00000016907	sall3a	88	87.510	Xiphophorus_couchianus
ENSPREG00000014420	sall3a	96	45.333	ENSXMAG00000000798	sall3b	97	45.333	Xiphophorus_maculatus
ENSPREG00000014420	sall3a	99	96.443	ENSXMAG00000023447	sall3a	100	96.443	Xiphophorus_maculatus