EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000014574 (Gene tree)
Gene ID: 103461084
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein Musashi homolog 1-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 8036 bases
Position: chrKK215600.1:1061-9096
Accession: 103461084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000021562	RRM_1	PF00076.22	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000021787	-	609	XM_008403411	ENSPREP00000021562	202 (aa)	XP_008401633	-

Gene Model

Click here to download ENSPREG00000014574's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000014574's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000014574	-	100	88.119	ENSPREG00000021416	-	75	88.119
ENSPREG00000014574	-	90	75.652	ENSPREG00000000881	msi2a	78	64.356

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000014574	-	100	78.571	ENSG00000135097	MSI1	70	85.890	Homo_sapiens
ENSPREG00000014574	-	100	87.624	ENSAPOG00000003191	MSI1	73	87.624	Acanthochromis_polyacanthus
ENSPREG00000014574	-	100	86.425	ENSAPOG00000023458	-	77	86.425	Acanthochromis_polyacanthus
ENSPREG00000014574	-	100	70.039	ENSAMEG00000013302	MSI1	71	70.039	Ailuropoda_melanoleuca
ENSPREG00000014574	-	94	89.529	ENSACIG00000017754	-	62	89.529	Amphilophus_citrinellus
ENSPREG00000014574	-	100	86.634	ENSAOCG00000009031	-	76	86.634	Amphiprion_ocellaris
ENSPREG00000014574	-	100	80.090	ENSAOCG00000003804	MSI1	76	80.090	Amphiprion_ocellaris
ENSPREG00000014574	-	100	80.090	ENSAPEG00000003245	MSI1	76	80.090	Amphiprion_percula
ENSPREG00000014574	-	100	86.425	ENSAPEG00000006857	-	51	86.425	Amphiprion_percula
ENSPREG00000014574	-	100	79.730	ENSATEG00000023779	-	76	80.180	Anabas_testudineus
ENSPREG00000014574	-	100	95.050	ENSATEG00000017059	MSI1	88	86.878	Anabas_testudineus
ENSPREG00000014574	-	100	80.631	ENSACAG00000002762	MSI1	61	80.631	Anolis_carolinensis
ENSPREG00000014574	-	100	78.571	ENSANAG00000027151	MSI1	63	78.571	Aotus_nancymaae
ENSPREG00000014574	-	100	86.425	ENSACLG00000000117	-	81	86.425	Astatotilapia_calliptera
ENSPREG00000014574	-	100	89.109	ENSACLG00000011230	MSI1	76	81.448	Astatotilapia_calliptera
ENSPREG00000014574	-	100	88.119	ENSAMXG00000038960	msi1	62	88.119	Astyanax_mexicanus
ENSPREG00000014574	-	100	85.854	ENSBTAG00000009800	MSI1	64	85.854	Bos_taurus
ENSPREG00000014574	-	100	85.854	ENSCJAG00000008578	MSI1	62	78.571	Callithrix_jacchus
ENSPREG00000014574	-	100	78.571	ENSCAFG00000010283	MSI1	62	78.571	Canis_familiaris
ENSPREG00000014574	-	100	78.571	ENSCAFG00020020585	MSI1	72	78.571	Canis_lupus_dingo
ENSPREG00000014574	-	100	77.533	ENSCHIG00000024304	MSI1	62	77.533	Capra_hircus
ENSPREG00000014574	-	100	78.571	ENSTSYG00000033949	MSI1	92	78.571	Carlito_syrichta
ENSPREG00000014574	-	100	78.571	ENSCAPG00000003919	MSI1	64	78.571	Cavia_aperea
ENSPREG00000014574	-	100	78.571	ENSCPOG00000012361	MSI1	65	78.571	Cavia_porcellus
ENSPREG00000014574	-	100	78.571	ENSCCAG00000035567	MSI1	62	78.571	Cebus_capucinus
ENSPREG00000014574	-	100	81.776	ENSCATG00000030019	MSI1	61	81.776	Cercocebus_atys
ENSPREG00000014574	-	100	78.571	ENSCLAG00000011329	MSI1	65	78.571	Chinchilla_lanigera
ENSPREG00000014574	-	100	87.129	ENSCPBG00000011349	MSI1	57	87.129	Chrysemys_picta_bellii
ENSPREG00000014574	-	100	78.571	ENSCANG00000040651	MSI1	68	78.571	Colobus_angolensis_palliatus
ENSPREG00000014574	-	100	78.571	ENSCGRG00001018883	Msi1	62	78.571	Cricetulus_griseus_chok1gshd
ENSPREG00000014574	-	100	79.186	ENSCSEG00000005834	-	93	79.186	Cynoglossus_semilaevis
ENSPREG00000014574	-	100	92.079	ENSCSEG00000008352	-	75	92.079	Cynoglossus_semilaevis
ENSPREG00000014574	-	100	92.079	ENSCSEG00000011032	MSI1	83	92.079	Cynoglossus_semilaevis
ENSPREG00000014574	-	100	94.059	ENSCVAG00000009100	MSI1	75	94.059	Cyprinodon_variegatus
ENSPREG00000014574	-	100	63.348	ENSCVAG00000017463	-	85	63.348	Cyprinodon_variegatus
ENSPREG00000014574	-	100	89.604	ENSDARG00000010710	msi1	84	89.604	Danio_rerio
ENSPREG00000014574	-	100	80.543	ENSDARG00000102015	CABZ01037298.1	87	80.543	Danio_rerio
ENSPREG00000014574	-	100	71.493	ENSDNOG00000005713	MSI1	61	71.493	Dasypus_novemcinctus
ENSPREG00000014574	-	100	78.571	ENSDORG00000005610	Msi1	64	78.571	Dipodomys_ordii
ENSPREG00000014574	-	100	73.214	ENSETEG00000004756	MSI1	68	73.214	Echinops_telfairi
ENSPREG00000014574	-	100	85.854	ENSEASG00005004736	MSI1	60	85.854	Equus_asinus_asinus
ENSPREG00000014574	-	100	85.854	ENSECAG00000017526	MSI1	62	78.571	Equus_caballus
ENSPREG00000014574	-	100	75.934	ENSELUG00000023219	MSI1	76	75.934	Esox_lucius
ENSPREG00000014574	-	100	78.605	ENSELUG00000023280	-	63	76.279	Esox_lucius
ENSPREG00000014574	-	100	85.854	ENSFCAG00000011007	MSI1	62	78.571	Felis_catus
ENSPREG00000014574	-	100	80.090	ENSFALG00000007574	MSI1	71	80.090	Ficedula_albicollis
ENSPREG00000014574	-	100	78.125	ENSFDAG00000019586	MSI1	68	78.125	Fukomys_damarensis
ENSPREG00000014574	-	100	87.624	ENSFHEG00000003560	-	77	87.624	Fundulus_heteroclitus
ENSPREG00000014574	-	100	94.554	ENSFHEG00000022446	MSI1	77	86.425	Fundulus_heteroclitus
ENSPREG00000014574	-	100	81.900	ENSGMOG00000001006	MSI1	76	81.448	Gadus_morhua
ENSPREG00000014574	-	100	80.090	ENSGMOG00000017838	-	61	80.090	Gadus_morhua
ENSPREG00000014574	-	100	80.090	ENSGALG00000007227	MSI1	55	80.090	Gallus_gallus
ENSPREG00000014574	-	100	78.733	ENSGAFG00000021522	MSI1	76	78.733	Gambusia_affinis
ENSPREG00000014574	-	100	79.911	ENSGACG00000008674	-	62	79.911	Gasterosteus_aculeatus
ENSPREG00000014574	-	100	90.594	ENSGACG00000012679	MSI1	75	90.594	Gasterosteus_aculeatus
ENSPREG00000014574	-	100	87.129	ENSGAGG00000016037	MSI1	58	87.129	Gopherus_agassizii
ENSPREG00000014574	-	100	78.571	ENSGGOG00000010328	MSI1	71	78.571	Gorilla_gorilla
ENSPREG00000014574	-	100	86.425	ENSHBUG00000011841	-	76	86.425	Haplochromis_burtoni
ENSPREG00000014574	-	100	81.448	ENSHBUG00000021921	MSI1	76	81.448	Haplochromis_burtoni
ENSPREG00000014574	-	100	78.125	ENSHGLG00000012782	MSI1	62	78.125	Heterocephalus_glaber_female
ENSPREG00000014574	-	100	78.125	ENSHGLG00100016848	MSI1	68	78.125	Heterocephalus_glaber_male
ENSPREG00000014574	-	100	85.149	ENSHCOG00000012019	MSI1	80	85.149	Hippocampus_comes
ENSPREG00000014574	-	100	91.584	ENSHCOG00000012067	-	74	91.584	Hippocampus_comes
ENSPREG00000014574	-	100	88.614	ENSIPUG00000001976	msi1	81	88.614	Ictalurus_punctatus
ENSPREG00000014574	-	100	78.571	ENSSTOG00000009799	MSI1	72	78.571	Ictidomys_tridecemlineatus
ENSPREG00000014574	-	100	69.756	ENSJJAG00000010643	-	58	69.756	Jaculus_jaculus
ENSPREG00000014574	-	100	80.365	ENSJJAG00000010463	Msi1	61	80.365	Jaculus_jaculus
ENSPREG00000014574	-	100	84.163	ENSKMAG00000011251	MSI1	76	84.163	Kryptolebias_marmoratus
ENSPREG00000014574	-	100	86.634	ENSKMAG00000019877	-	80	86.634	Kryptolebias_marmoratus
ENSPREG00000014574	-	100	88.614	ENSLBEG00000001375	-	70	88.614	Labrus_bergylta
ENSPREG00000014574	-	100	94.059	ENSLBEG00000008789	MSI1	75	94.059	Labrus_bergylta
ENSPREG00000014574	-	100	79.279	ENSLACG00000018287	MSI1	82	79.279	Latimeria_chalumnae
ENSPREG00000014574	-	100	78.431	ENSLAFG00000009412	MSI1	87	76.106	Loxodonta_africana
ENSPREG00000014574	-	100	78.571	ENSMFAG00000001798	MSI1	65	78.571	Macaca_fascicularis
ENSPREG00000014574	-	100	78.571	ENSMMUG00000031527	MSI1	62	78.571	Macaca_mulatta
ENSPREG00000014574	-	100	85.854	ENSMNEG00000040034	MSI1	60	85.854	Macaca_nemestrina
ENSPREG00000014574	-	100	78.571	ENSMLEG00000003921	MSI1	68	78.571	Mandrillus_leucophaeus
ENSPREG00000014574	-	100	85.520	ENSMAMG00000002279	MSI1	76	85.520	Mastacembelus_armatus
ENSPREG00000014574	-	100	87.129	ENSMAMG00000018426	-	76	87.129	Mastacembelus_armatus
ENSPREG00000014574	-	100	81.448	ENSMZEG00005026892	MSI1	76	81.448	Maylandia_zebra
ENSPREG00000014574	-	100	94.554	ENSMZEG00005000340	-	75	94.554	Maylandia_zebra
ENSPREG00000014574	-	50	94.118	ENSMGAG00000016518	-	60	94.118	Meleagris_gallopavo
ENSPREG00000014574	-	100	79.909	ENSMICG00000033181	MSI1	61	79.909	Microcebus_murinus
ENSPREG00000014574	-	100	78.571	ENSMOCG00000002286	Msi1	62	78.571	Microtus_ochrogaster
ENSPREG00000014574	-	100	88.119	ENSMMOG00000012265	-	80	88.119	Mola_mola
ENSPREG00000014574	-	100	82.673	ENSMMOG00000010492	MSI1	73	82.673	Mola_mola
ENSPREG00000014574	-	100	44.248	ENSMODG00000003189	-	68	44.248	Monodelphis_domestica
ENSPREG00000014574	-	100	90.521	ENSMALG00000017889	MSI1	77	90.521	Monopterus_albus
ENSPREG00000014574	-	100	86.139	ENSMALG00000001426	-	80	86.139	Monopterus_albus
ENSPREG00000014574	-	100	78.571	MGP_CAROLIEiJ_G0027626	Msi1	82	85.714	Mus_caroli
ENSPREG00000014574	-	100	79.186	ENSMUSG00000054256	Msi1	82	85.714	Mus_musculus
ENSPREG00000014574	-	100	78.733	MGP_PahariEiJ_G0024206	Msi1	82	85.093	Mus_pahari
ENSPREG00000014574	-	100	78.571	MGP_SPRETEiJ_G0028624	Msi1	82	85.714	Mus_spretus
ENSPREG00000014574	-	100	78.571	ENSMPUG00000003168	MSI1	72	78.571	Mustela_putorius_furo
ENSPREG00000014574	-	100	70.455	ENSMLUG00000010313	MSI1	65	70.455	Myotis_lucifugus
ENSPREG00000014574	-	100	78.571	ENSNGAG00000014508	Msi1	62	78.571	Nannospalax_galili
ENSPREG00000014574	-	100	94.554	ENSNBRG00000000841	-	75	94.554	Neolamprologus_brichardi
ENSPREG00000014574	-	100	81.448	ENSNBRG00000018012	MSI1	86	81.448	Neolamprologus_brichardi
ENSPREG00000014574	-	100	55.516	ENSNLEG00000015636	MSI1	95	55.516	Nomascus_leucogenys
ENSPREG00000014574	-	100	61.607	ENSMEUG00000015759	MSI1	68	61.607	Notamacropus_eugenii
ENSPREG00000014574	-	94	67.299	ENSOPRG00000016879	MSI1	64	67.299	Ochotona_princeps
ENSPREG00000014574	-	100	78.571	ENSODEG00000006328	MSI1	68	78.571	Octodon_degus
ENSPREG00000014574	-	100	81.250	ENSONIG00000019452	-	77	81.250	Oreochromis_niloticus
ENSPREG00000014574	-	100	86.425	ENSONIG00000011182	MSI1	76	86.425	Oreochromis_niloticus
ENSPREG00000014574	-	100	78.571	ENSOCUG00000027716	MSI1	72	78.571	Oryctolagus_cuniculus
ENSPREG00000014574	-	100	79.902	ENSORLG00000029593	MSI1	78	79.208	Oryzias_latipes
ENSPREG00000014574	-	100	95.050	ENSORLG00000019978	-	78	95.050	Oryzias_latipes
ENSPREG00000014574	-	100	87.129	ENSORLG00020008266	MSI1	78	87.129	Oryzias_latipes_hni
ENSPREG00000014574	-	100	95.050	ENSORLG00015013672	-	57	95.050	Oryzias_latipes_hsok
ENSPREG00000014574	-	100	87.129	ENSORLG00015003916	MSI1	78	87.129	Oryzias_latipes_hsok
ENSPREG00000014574	-	100	79.638	ENSOMEG00000002272	-	81	79.208	Oryzias_melastigma
ENSPREG00000014574	-	100	88.479	ENSOMEG00000017536	MSI1	81	88.479	Oryzias_melastigma
ENSPREG00000014574	-	100	77.533	ENSOGAG00000003847	MSI1	62	77.533	Otolemur_garnettii
ENSPREG00000014574	-	100	74.222	ENSOARG00000012097	MSI1	68	74.222	Ovis_aries
ENSPREG00000014574	-	100	78.571	ENSPPAG00000043073	MSI1	68	78.571	Pan_paniscus
ENSPREG00000014574	-	100	78.571	ENSPPRG00000000370	MSI1	62	78.571	Panthera_pardus
ENSPREG00000014574	-	100	78.571	ENSPTIG00000008913	MSI1	72	78.571	Panthera_tigris_altaica
ENSPREG00000014574	-	100	81.776	ENSPTRG00000005531	MSI1	61	81.776	Pan_troglodytes
ENSPREG00000014574	-	100	78.571	ENSPANG00000006335	MSI1	62	78.571	Papio_anubis
ENSPREG00000014574	-	100	87.129	ENSPKIG00000016497	MSI1	58	87.129	Paramormyrops_kingsleyae
ENSPREG00000014574	-	100	80.543	ENSPKIG00000023575	-	76	80.543	Paramormyrops_kingsleyae
ENSPREG00000014574	-	100	78.125	ENSPSIG00000009621	-	98	78.125	Pelodiscus_sinensis
ENSPREG00000014574	-	100	73.756	ENSPSIG00000011608	-	58	74.661	Pelodiscus_sinensis
ENSPREG00000014574	-	94	93.651	ENSPMGG00000000514	MSI1	77	93.651	Periophthalmus_magnuspinnatus
ENSPREG00000014574	-	100	67.290	ENSPMGG00000007743	-	72	66.981	Periophthalmus_magnuspinnatus
ENSPREG00000014574	-	100	78.571	ENSPEMG00000010491	Msi1	78	78.571	Peromyscus_maniculatus_bairdii
ENSPREG00000014574	-	100	100.000	ENSPFOG00000013113	MSI1	77	86.878	Poecilia_formosa
ENSPREG00000014574	-	100	79.638	ENSPFOG00000008319	-	65	79.638	Poecilia_formosa
ENSPREG00000014574	-	100	80.296	ENSPLAG00000012431	-	76	80.296	Poecilia_latipinna
ENSPREG00000014574	-	100	86.878	ENSPLAG00000014025	-	77	86.878	Poecilia_latipinna
ENSPREG00000014574	-	100	79.208	ENSPMEG00000007025	-	75	78.713	Poecilia_mexicana
ENSPREG00000014574	-	100	95.050	ENSPMEG00000012796	MSI1	75	95.050	Poecilia_mexicana
ENSPREG00000014574	-	100	78.571	ENSPPYG00000005027	MSI1	62	78.571	Pongo_abelii
ENSPREG00000014574	-	63	81.633	ENSPCAG00000002300	MSI1	54	81.633	Procavia_capensis
ENSPREG00000014574	-	100	79.909	ENSPCOG00000017341	MSI1	61	79.909	Propithecus_coquereli
ENSPREG00000014574	-	100	56.579	ENSPVAG00000002225	MSI1	68	56.579	Pteropus_vampyrus
ENSPREG00000014574	-	100	81.448	ENSPNYG00000004379	MSI1	76	81.448	Pundamilia_nyererei
ENSPREG00000014574	-	100	86.425	ENSPNYG00000002529	-	76	86.425	Pundamilia_nyererei
ENSPREG00000014574	-	100	87.624	ENSPNAG00000019337	msi1	75	87.624	Pygocentrus_nattereri
ENSPREG00000014574	-	100	78.571	ENSRNOG00000001156	Msi1	72	78.571	Rattus_norvegicus
ENSPREG00000014574	-	100	78.571	ENSRBIG00000036889	MSI1	72	78.571	Rhinopithecus_bieti
ENSPREG00000014574	-	100	78.571	ENSRROG00000041076	MSI1	63	78.571	Rhinopithecus_roxellana
ENSPREG00000014574	-	100	78.571	ENSSBOG00000030259	MSI1	64	78.571	Saimiri_boliviensis_boliviensis
ENSPREG00000014574	-	100	65.198	ENSSHAG00000006834	MSI1	74	65.198	Sarcophilus_harrisii
ENSPREG00000014574	-	100	82.673	ENSSFOG00015014964	-	61	80.543	Scleropages_formosus
ENSPREG00000014574	-	100	89.109	ENSSFOG00015005350	MSI1	80	89.109	Scleropages_formosus
ENSPREG00000014574	-	100	79.638	ENSSMAG00000009156	-	70	78.365	Scophthalmus_maximus
ENSPREG00000014574	-	100	94.059	ENSSMAG00000018824	MSI1	81	94.059	Scophthalmus_maximus
ENSPREG00000014574	-	100	88.835	ENSSDUG00000022697	-	81	88.835	Seriola_dumerili
ENSPREG00000014574	-	100	86.878	ENSSDUG00000001027	MSI1	77	86.878	Seriola_dumerili
ENSPREG00000014574	-	100	95.050	ENSSLDG00000016832	MSI1	75	95.050	Seriola_lalandi_dorsalis
ENSPREG00000014574	-	100	88.835	ENSSLDG00000018706	-	81	88.835	Seriola_lalandi_dorsalis
ENSPREG00000014574	-	100	80.090	ENSSPUG00000015741	MSI1	61	80.090	Sphenodon_punctatus
ENSPREG00000014574	-	100	84.158	ENSSPAG00000014085	-	100	84.158	Stegastes_partitus
ENSPREG00000014574	-	100	88.614	ENSSPAG00000013098	-	81	80.995	Stegastes_partitus
ENSPREG00000014574	-	100	85.366	ENSSSCG00000029365	MSI1	72	78.125	Sus_scrofa
ENSPREG00000014574	-	100	80.631	ENSTGUG00000009534	MSI1	65	80.631	Taeniopygia_guttata
ENSPREG00000014574	-	100	77.723	ENSTRUG00000015636	-	65	77.723	Takifugu_rubripes
ENSPREG00000014574	-	100	85.520	ENSTRUG00000016249	MSI1	87	85.520	Takifugu_rubripes
ENSPREG00000014574	-	100	80.090	ENSTNIG00000011469	MSI1	73	80.090	Tetraodon_nigroviridis
ENSPREG00000014574	-	100	56.522	ENSTNIG00000019814	-	63	53.782	Tetraodon_nigroviridis
ENSPREG00000014574	-	100	67.556	ENSTBEG00000007182	MSI1	82	67.857	Tupaia_belangeri
ENSPREG00000014574	-	100	81.860	ENSUMAG00000006176	MSI1	63	81.860	Ursus_maritimus
ENSPREG00000014574	-	100	80.365	ENSVVUG00000020993	MSI1	67	78.571	Vulpes_vulpes
ENSPREG00000014574	-	100	76.889	ENSXETG00000012216	msi1	62	77.632	Xenopus_tropicalis
ENSPREG00000014574	-	100	86.634	ENSXCOG00000017605	MSI1	57	86.634	Xiphophorus_couchianus
ENSPREG00000014574	-	100	86.634	ENSXMAG00000018237	-	71	86.634	Xiphophorus_maculatus
ENSPREG00000014574	-	100	94.059	ENSXMAG00000027103	MSI1	58	94.059	Xiphophorus_maculatus