EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPREG00000014608 (Gene tree)
Gene ID
103468379
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Plus strand
Length
16775 bases
Position
chrLG8:6741008-6757782
Accession
103468379
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000021652ResIIIPF04851.151e-0811
ENSPREP00000021746ResIIIPF04851.151e-0811
ENSPREP00000021614ResIIIPF04851.151.3e-0811
ENSPREP00000021694ResIIIPF04851.151.3e-0811
ENSPREP00000021652BRKPF07533.166.3e-1711
ENSPREP00000021746BRKPF07533.166.4e-1711
ENSPREP00000021694BRKPF07533.166.4e-1711
ENSPREP00000021614BRKPF07533.166.9e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000021974-4680-ENSPREP000000217461559 (aa)--
ENSPRET00000021921-5109-ENSPREP000000216941567 (aa)--
ENSPRET00000021839-4968XM_008415429ENSPREP000000216141641 (aa)XP_008413651UPI0004A35003
ENSPRET00000021877-5052-ENSPREP000000216521548 (aa)--
Gene Model
Click here to download ENSPREG00000014608's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000014608's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPREG00000014608smarca4a9970.204ENSPREG00000013800SMARCA29371.565
ENSPREG00000014608smarca4a9486.569ENSPREG00000014823-9783.105
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000014608smarca4a10086.606ENSG00000127616SMARCA499100.000Homo_sapiens
ENSPREG00000014608smarca4a7691.582ENSAPOG00000003509smarca4a9889.650Acanthochromis_polyacanthus
ENSPREG00000014608smarca4a9682.566ENSAPOG00000004542SMARCA49982.110Acanthochromis_polyacanthus
ENSPREG00000014608smarca4a10082.322ENSAMEG00000010868SMARCA49881.552Ailuropoda_melanoleuca
ENSPREG00000014608smarca4a9992.209ENSACIG00000021550smarca4a9891.656Amphilophus_citrinellus
ENSPREG00000014608smarca4a9583.498ENSACIG00000003035-9783.256Amphilophus_citrinellus
ENSPREG00000014608smarca4a9088.041ENSAOCG00000019167smarca4a10086.119Amphiprion_ocellaris
ENSPREG00000014608smarca4a9584.668ENSAOCG00000009450-9784.427Amphiprion_ocellaris
ENSPREG00000014608smarca4a9088.108ENSAPEG00000015559smarca4a10086.188Amphiprion_percula
ENSPREG00000014608smarca4a10082.263ENSAPEG00000023108-9880.772Amphiprion_percula
ENSPREG00000014608smarca4a9983.002ENSATEG00000001094-9783.886Anabas_testudineus
ENSPREG00000014608smarca4a10091.884ENSATEG00000011524smarca4a10091.520Anabas_testudineus
ENSPREG00000014608smarca4a9986.397ENSANAG00000036991SMARCA49783.791Aotus_nancymaae
ENSPREG00000014608smarca4a9685.348ENSACLG00000008638-9880.665Astatotilapia_calliptera
ENSPREG00000014608smarca4a9991.862ENSACLG00000000163smarca4a9991.188Astatotilapia_calliptera
ENSPREG00000014608smarca4a9585.308ENSAMXG00000011238-9682.957Astyanax_mexicanus
ENSPREG00000014608smarca4a9783.281ENSAMXG00000021023smarca4a9883.653Astyanax_mexicanus
ENSPREG00000014608smarca4a10086.008ENSBTAG00000019220SMARCA49784.850Bos_taurus
ENSPREG00000014608smarca4a10082.576ENSCJAG00000005936SMARCA49387.463Callithrix_jacchus
ENSPREG00000014608smarca4a10086.372ENSCAFG00000017584SMARCA49785.442Canis_familiaris
ENSPREG00000014608smarca4a10086.372ENSCAFG00020024620SMARCA49685.442Canis_lupus_dingo
ENSPREG00000014608smarca4a10082.033ENSCHIG00000015318SMARCA49881.424Capra_hircus
ENSPREG00000014608smarca4a10086.432ENSTSYG00000012966SMARCA49785.888Carlito_syrichta
ENSPREG00000014608smarca4a9577.369ENSCAPG00000015932SMARCA49389.610Cavia_aperea
ENSPREG00000014608smarca4a10086.355ENSCPOG00000015549SMARCA49785.315Cavia_porcellus
ENSPREG00000014608smarca4a10083.303ENSCCAG00000031660SMARCA49682.353Cebus_capucinus
ENSPREG00000014608smarca4a10086.554ENSCATG00000029530SMARCA49785.569Cercocebus_atys
ENSPREG00000014608smarca4a10085.931ENSCLAG00000011946SMARCA49785.687Chinchilla_lanigera
ENSPREG00000014608smarca4a10086.077ENSCPBG00000009994SMARCA49985.006Chrysemys_picta_bellii
ENSPREG00000014608smarca4a10086.493ENSCANG00000036013SMARCA49785.569Colobus_angolensis_palliatus
ENSPREG00000014608smarca4a10086.432ENSCGRG00001016732Smarca49785.315Cricetulus_griseus_chok1gshd
ENSPREG00000014608smarca4a10086.432ENSCGRG00000017242Smarca49785.315Cricetulus_griseus_crigri
ENSPREG00000014608smarca4a9691.149ENSCSEG00000014771smarca4a10090.612Cynoglossus_semilaevis
ENSPREG00000014608smarca4a9995.407ENSCVAG00000006979smarca4a9995.407Cyprinodon_variegatus
ENSPREG00000014608smarca4a9982.266ENSCVAG00000003018-9881.549Cyprinodon_variegatus
ENSPREG00000014608smarca4a10087.659ENSDARG00000077226smarca4a9784.862Danio_rerio
ENSPREG00000014608smarca4a9682.945ENSDARG00000104339SMARCA49481.635Danio_rerio
ENSPREG00000014608smarca4a8183.630ENSDNOG00000048847SMARCA49090.899Dasypus_novemcinctus
ENSPREG00000014608smarca4a8581.198ENSDORG00000002544Smarca48985.765Dipodomys_ordii
ENSPREG00000014608smarca4a9574.537ENSETEG00000013361SMARCA49474.226Echinops_telfairi
ENSPREG00000014608smarca4a10086.477ENSEASG00005006167SMARCA49685.442Equus_asinus_asinus
ENSPREG00000014608smarca4a10086.537ENSECAG00000008334SMARCA49885.505Equus_caballus
ENSPREG00000014608smarca4a9977.498ENSELUG00000023232-9484.936Esox_lucius
ENSPREG00000014608smarca4a10087.582ENSELUG00000010247smarca4a10086.563Esox_lucius
ENSPREG00000014608smarca4a10086.336ENSFCAG00000004894SMARCA49785.343Felis_catus
ENSPREG00000014608smarca4a8788.206ENSFALG00000004208SMARCA49283.254Ficedula_albicollis
ENSPREG00000014608smarca4a9385.942ENSFDAG00000012237SMARCA49785.000Fukomys_damarensis
ENSPREG00000014608smarca4a10096.105ENSFHEG00000010182smarca4a10096.105Fundulus_heteroclitus
ENSPREG00000014608smarca4a10083.551ENSFHEG00000007902-9982.957Fundulus_heteroclitus
ENSPREG00000014608smarca4a8990.678ENSGMOG00000002649smarca4a9488.095Gadus_morhua
ENSPREG00000014608smarca4a9380.446ENSGMOG00000005756-8879.571Gadus_morhua
ENSPREG00000014608smarca4a7485.538ENSGALG00000047145SMARCA410084.306Gallus_gallus
ENSPREG00000014608smarca4a9398.053ENSGAFG00000014900smarca4a10098.193Gambusia_affinis
ENSPREG00000014608smarca4a9980.925ENSGAFG00000008827-9880.813Gambusia_affinis
ENSPREG00000014608smarca4a9890.211ENSGACG00000006691smarca4a10089.165Gasterosteus_aculeatus
ENSPREG00000014608smarca4a9978.727ENSGACG00000016033-9977.825Gasterosteus_aculeatus
ENSPREG00000014608smarca4a10086.295ENSGAGG00000016757SMARCA49985.229Gopherus_agassizii
ENSPREG00000014608smarca4a10086.554ENSGGOG00000009882SMARCA49785.569Gorilla_gorilla
ENSPREG00000014608smarca4a10092.010ENSHBUG00000021172smarca4a9891.119Haplochromis_burtoni
ENSPREG00000014608smarca4a10083.323ENSHBUG00000005447-9882.484Haplochromis_burtoni
ENSPREG00000014608smarca4a10086.320ENSHGLG00000010519SMARCA49783.064Heterocephalus_glaber_female
ENSPREG00000014608smarca4a10085.420ENSHGLG00100013774SMARCA49784.571Heterocephalus_glaber_male
ENSPREG00000014608smarca4a9889.732ENSHCOG00000009510smarca4a9690.967Hippocampus_comes
ENSPREG00000014608smarca4a10087.862ENSIPUG00000006107smarca4a9985.050Ictalurus_punctatus
ENSPREG00000014608smarca4a9882.940ENSIPUG00000016346-9482.003Ictalurus_punctatus
ENSPREG00000014608smarca4a10086.477ENSSTOG00000007939SMARCA49785.378Ictidomys_tridecemlineatus
ENSPREG00000014608smarca4a10084.721ENSJJAG00000012877Smarca49783.001Jaculus_jaculus
ENSPREG00000014608smarca4a9684.584ENSKMAG00000019518-9884.944Kryptolebias_marmoratus
ENSPREG00000014608smarca4a10093.118ENSKMAG00000011931smarca4a9991.651Kryptolebias_marmoratus
ENSPREG00000014608smarca4a9986.216ENSLBEG00000017383smarca4a9785.426Labrus_bergylta
ENSPREG00000014608smarca4a9581.931ENSLBEG00000020655-9881.931Labrus_bergylta
ENSPREG00000014608smarca4a5678.851ENSLACG00000015309SMARCA410078.136Latimeria_chalumnae
ENSPREG00000014608smarca4a10084.242ENSLOCG00000007820smarca4a9983.250Lepisosteus_oculatus
ENSPREG00000014608smarca4a10086.457ENSLAFG00000001433SMARCA49785.470Loxodonta_africana
ENSPREG00000014608smarca4a10086.554ENSMFAG00000032146SMARCA49685.569Macaca_fascicularis
ENSPREG00000014608smarca4a10086.554ENSMMUG00000012042SMARCA49592.000Macaca_mulatta
ENSPREG00000014608smarca4a10086.311ENSMNEG00000028512SMARCA49785.614Macaca_nemestrina
ENSPREG00000014608smarca4a10086.432ENSMLEG00000034976SMARCA49785.406Mandrillus_leucophaeus
ENSPREG00000014608smarca4a10091.889ENSMAMG00000009256smarca4a10091.465Mastacembelus_armatus
ENSPREG00000014608smarca4a9981.878ENSMAMG00000002841-9885.066Mastacembelus_armatus
ENSPREG00000014608smarca4a9683.748ENSMZEG00005023861-9881.353Maylandia_zebra
ENSPREG00000014608smarca4a10091.894ENSMZEG00005003889smarca4a9991.125Maylandia_zebra
ENSPREG00000014608smarca4a10086.155ENSMAUG00000020731Smarca49785.152Mesocricetus_auratus
ENSPREG00000014608smarca4a10086.336ENSMICG00000009806SMARCA49785.343Microcebus_murinus
ENSPREG00000014608smarca4a10086.094ENSMOCG00000022209Smarca49785.025Microtus_ochrogaster
ENSPREG00000014608smarca4a9980.655ENSMMOG00000008466-9879.633Mola_mola
ENSPREG00000014608smarca4a9688.518ENSMMOG00000007571smarca4a9888.224Mola_mola
ENSPREG00000014608smarca4a10085.128ENSMODG00000006287SMARCA49983.138Monodelphis_domestica
ENSPREG00000014608smarca4a8981.825ENSMALG00000021534-9981.502Monopterus_albus
ENSPREG00000014608smarca4a9691.839ENSMALG00000003388smarca4a10091.641Monopterus_albus
ENSPREG00000014608smarca4a10086.242MGP_CAROLIEiJ_G0031879Smarca49686.689Mus_caroli
ENSPREG00000014608smarca4a10086.242ENSMUSG00000032187Smarca49686.689Mus_musculus
ENSPREG00000014608smarca4a10085.939MGP_PahariEiJ_G0014745Smarca49686.689Mus_pahari
ENSPREG00000014608smarca4a10086.242MGP_SPRETEiJ_G0033003Smarca49686.689Mus_spretus
ENSPREG00000014608smarca4a10086.432ENSMPUG00000005711SMARCA49785.442Mustela_putorius_furo
ENSPREG00000014608smarca4a10086.554ENSMLUG00000004491-9785.505Myotis_lucifugus
ENSPREG00000014608smarca4a10085.766ENSNGAG00000021852Smarca49785.532Nannospalax_galili
ENSPREG00000014608smarca4a8982.337ENSNBRG00000018865-9982.185Neolamprologus_brichardi
ENSPREG00000014608smarca4a9687.850ENSNBRG00000011457smarca4a9686.875Neolamprologus_brichardi
ENSPREG00000014608smarca4a9191.429ENSNLEG00000012389SMARCA49483.148Nomascus_leucogenys
ENSPREG00000014608smarca4a8089.655ENSOPRG00000000885-7689.655Ochotona_princeps
ENSPREG00000014608smarca4a10083.624ENSODEG00000017127SMARCA48488.453Octodon_degus
ENSPREG00000014608smarca4a10091.949ENSONIG00000008196smarca4a9990.863Oreochromis_niloticus
ENSPREG00000014608smarca4a10083.323ENSONIG00000018040-9981.109Oreochromis_niloticus
ENSPREG00000014608smarca4a9979.755ENSOCUG00000001787SMARCA49880.552Oryctolagus_cuniculus
ENSPREG00000014608smarca4a10091.291ENSORLG00000015452smarca4a10090.499Oryzias_latipes
ENSPREG00000014608smarca4a9682.984ENSORLG00000003955-9878.651Oryzias_latipes
ENSPREG00000014608smarca4a10091.352ENSORLG00020004611smarca4a10090.499Oryzias_latipes_hni
ENSPREG00000014608smarca4a9682.995ENSORLG00020009728-9878.874Oryzias_latipes_hni
ENSPREG00000014608smarca4a9982.431ENSORLG00015007739-9579.722Oryzias_latipes_hsok
ENSPREG00000014608smarca4a10090.987ENSORLG00015016560smarca4a10090.438Oryzias_latipes_hsok
ENSPREG00000014608smarca4a10092.078ENSOMEG00000007486smarca4a10091.286Oryzias_melastigma
ENSPREG00000014608smarca4a9782.954ENSOMEG00000016626-9580.051Oryzias_melastigma
ENSPREG00000014608smarca4a9085.193ENSOGAG00000016148SMARCA410083.402Otolemur_garnettii
ENSPREG00000014608smarca4a10085.412ENSOARG00000017454SMARCA49685.668Ovis_aries
ENSPREG00000014608smarca4a10086.554ENSPPAG00000043191SMARCA49785.569Pan_paniscus
ENSPREG00000014608smarca4a10086.336ENSPPRG00000000064SMARCA49785.343Panthera_pardus
ENSPREG00000014608smarca4a7887.149ENSPTIG00000017447SMARCA49779.789Panthera_tigris_altaica
ENSPREG00000014608smarca4a10086.554ENSPTRG00000010488SMARCA49785.569Pan_troglodytes
ENSPREG00000014608smarca4a10086.432ENSPANG00000011042SMARCA49685.678Papio_anubis
ENSPREG00000014608smarca4a10084.313ENSPKIG00000010087-9884.792Paramormyrops_kingsleyae
ENSPREG00000014608smarca4a10087.976ENSPKIG00000007770SMARCA410087.183Paramormyrops_kingsleyae
ENSPREG00000014608smarca4a10080.653ENSPSIG00000005547SMARCA49979.716Pelodiscus_sinensis
ENSPREG00000014608smarca4a10086.155ENSPEMG00000020389Smarca49785.089Peromyscus_maniculatus_bairdii
ENSPREG00000014608smarca4a10086.841ENSPCIG00000017138SMARCA49985.436Phascolarctos_cinereus
ENSPREG00000014608smarca4a8886.885ENSPFOG00000012930-9982.450Poecilia_formosa
ENSPREG00000014608smarca4a10098.358ENSPFOG00000007892smarca4a10098.358Poecilia_formosa
ENSPREG00000014608smarca4a9984.625ENSPLAG00000018616-9884.310Poecilia_latipinna
ENSPREG00000014608smarca4a10098.418ENSPLAG00000014294smarca4a10098.418Poecilia_latipinna
ENSPREG00000014608smarca4a9982.020ENSPMEG00000008929-9883.418Poecilia_mexicana
ENSPREG00000014608smarca4a9997.353ENSPMEG00000003725smarca4a9898.426Poecilia_mexicana
ENSPREG00000014608smarca4a10084.739ENSPPYG00000009568SMARCA49783.313Pongo_abelii
ENSPREG00000014608smarca4a7694.505ENSPCAG00000014054SMARCA47592.188Procavia_capensis
ENSPREG00000014608smarca4a10086.554ENSPCOG00000023011SMARCA49785.406Propithecus_coquereli
ENSPREG00000014608smarca4a9680.035ENSPVAG00000007787SMARCA49379.849Pteropus_vampyrus
ENSPREG00000014608smarca4a9988.711ENSPNYG00000000717smarca4a9688.315Pundamilia_nyererei
ENSPREG00000014608smarca4a9583.366ENSPNYG00000023995-9882.916Pundamilia_nyererei
ENSPREG00000014608smarca4a9684.867ENSPNAG00000006636-9383.412Pygocentrus_nattereri
ENSPREG00000014608smarca4a9783.217ENSPNAG00000024136smarca4a9782.719Pygocentrus_nattereri
ENSPREG00000014608smarca4a10086.242ENSRNOG00000009271Smarca49785.305Rattus_norvegicus
ENSPREG00000014608smarca4a10086.493ENSRBIG00000038696SMARCA49685.569Rhinopithecus_bieti
ENSPREG00000014608smarca4a10086.493ENSRROG00000045509SMARCA49785.569Rhinopithecus_roxellana
ENSPREG00000014608smarca4a10086.303ENSSBOG00000026896SMARCA49688.241Saimiri_boliviensis_boliviensis
ENSPREG00000014608smarca4a10086.901ENSSHAG00000001642SMARCA49985.436Sarcophilus_harrisii
ENSPREG00000014608smarca4a10088.271ENSSFOG00015013823smarca49985.059Scleropages_formosus
ENSPREG00000014608smarca4a9190.659ENSSFOG00015009921-9489.755Scleropages_formosus
ENSPREG00000014608smarca4a10090.511ENSSMAG00000003200smarca4a10089.730Scophthalmus_maximus
ENSPREG00000014608smarca4a10080.486ENSSMAG00000014082-9978.532Scophthalmus_maximus
ENSPREG00000014608smarca4a10087.583ENSSDUG00000017298smarca4a10086.325Seriola_dumerili
ENSPREG00000014608smarca4a9984.800ENSSDUG00000005388-9880.663Seriola_dumerili
ENSPREG00000014608smarca4a9684.987ENSSLDG00000023663-9784.686Seriola_lalandi_dorsalis
ENSPREG00000014608smarca4a10091.767ENSSLDG00000024486smarca4a10090.805Seriola_lalandi_dorsalis
ENSPREG00000014608smarca4a6497.403ENSSARG00000013477SMARCA48197.403Sorex_araneus
ENSPREG00000014608smarca4a9682.392ENSSPUG00000004558SMARCA49881.383Sphenodon_punctatus
ENSPREG00000014608smarca4a10091.526ENSSPAG00000004248smarca4a10090.565Stegastes_partitus
ENSPREG00000014608smarca4a10082.488ENSSPAG00000012533-9686.576Stegastes_partitus
ENSPREG00000014608smarca4a10086.457ENSSSCG00000013629SMARCA49785.470Sus_scrofa
ENSPREG00000014608smarca4a5090.367ENSTGUG00000015488-9883.871Taeniopygia_guttata
ENSPREG00000014608smarca4a9084.558ENSTRUG00000004885smarca4a10081.962Takifugu_rubripes
ENSPREG00000014608smarca4a9681.728ENSTRUG00000001378SMARCA49879.064Takifugu_rubripes
ENSPREG00000014608smarca4a10081.466ENSTNIG00000004536SMARCA49980.645Tetraodon_nigroviridis
ENSPREG00000014608smarca4a7890.391ENSTNIG00000004859-10090.391Tetraodon_nigroviridis
ENSPREG00000014608smarca4a53100.000ENSTBEG00000000707-52100.000Tupaia_belangeri
ENSPREG00000014608smarca4a10083.373ENSTTRG00000009519SMARCA49781.983Tursiops_truncatus
ENSPREG00000014608smarca4a10086.432ENSUAMG00000014661SMARCA49785.442Ursus_americanus
ENSPREG00000014608smarca4a9288.547ENSUMAG00000022005SMARCA49890.523Ursus_maritimus
ENSPREG00000014608smarca4a10086.372ENSVVUG00000017820SMARCA49485.442Vulpes_vulpes
ENSPREG00000014608smarca4a10081.402ENSXETG00000009355smarca49980.012Xenopus_tropicalis
ENSPREG00000014608smarca4a9984.096ENSXCOG00000013494-9881.784Xiphophorus_couchianus
ENSPREG00000014608smarca4a9489.647ENSXMAG00000007030-9983.294Xiphophorus_maculatus
ENSPREG00000014608smarca4a10097.928ENSXMAG00000006321smarca4a10097.928Xiphophorus_maculatus

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