EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000014689 (Gene tree)
Gene ID: 103482437
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 8979 bases
Position: chrLG20:10427046-10436024
Accession: 103482437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000021743	zf-RanBP	PF00641.18	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000021971	-	2097	XM_008438590	ENSPREP00000021743	698 (aa)	XP_008436812	-

Gene Model

Click here to download ENSPREG00000014689's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret04217	Necroptosis	KEGG
pret04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000014689's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000014689	shrprbck1r	59	53.349	ENSPREG00000009702	sharpin	95	53.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000014689	shrprbck1r	100	79.972	ENSAPOG00000022737	shrprbck1r	100	79.972	Acanthochromis_polyacanthus
ENSPREG00000014689	shrprbck1r	59	54.779	ENSAPOG00000023352	sharpin	95	54.779	Acanthochromis_polyacanthus
ENSPREG00000014689	shrprbck1r	100	77.496	ENSACIG00000002184	shrprbck1r	100	77.496	Amphilophus_citrinellus
ENSPREG00000014689	shrprbck1r	59	54.186	ENSAOCG00000017464	sharpin	95	54.042	Amphiprion_ocellaris
ENSPREG00000014689	shrprbck1r	100	80.758	ENSAOCG00000002890	shrprbck1r	100	80.758	Amphiprion_ocellaris
ENSPREG00000014689	shrprbck1r	100	80.453	ENSAPEG00000023274	shrprbck1r	100	80.453	Amphiprion_percula
ENSPREG00000014689	shrprbck1r	59	54.186	ENSAPEG00000004049	sharpin	95	54.186	Amphiprion_percula
ENSPREG00000014689	shrprbck1r	100	78.521	ENSATEG00000014561	shrprbck1r	100	78.805	Anabas_testudineus
ENSPREG00000014689	shrprbck1r	59	55.658	ENSATEG00000007832	sharpin	88	55.658	Anabas_testudineus
ENSPREG00000014689	shrprbck1r	100	76.989	ENSACLG00000022609	shrprbck1r	100	77.699	Astatotilapia_calliptera
ENSPREG00000014689	shrprbck1r	54	56.053	ENSAMXG00000006229	sharpin	97	56.053	Astyanax_mexicanus
ENSPREG00000014689	shrprbck1r	100	67.989	ENSAMXG00000021016	shrprbck1r	100	68.313	Astyanax_mexicanus
ENSPREG00000014689	shrprbck1r	100	72.238	ENSCSEG00000011306	shrprbck1r	100	72.521	Cynoglossus_semilaevis
ENSPREG00000014689	shrprbck1r	100	87.870	ENSCVAG00000007250	shrprbck1r	100	87.870	Cyprinodon_variegatus
ENSPREG00000014689	shrprbck1r	59	53.972	ENSCVAG00000006586	sharpin	95	53.972	Cyprinodon_variegatus
ENSPREG00000014689	shrprbck1r	100	67.406	ENSDARG00000059871	shrprbck1r	100	67.545	Danio_rerio
ENSPREG00000014689	shrprbck1r	54	53.351	ENSDARG00000076995	sharpin	94	53.351	Danio_rerio
ENSPREG00000014689	shrprbck1r	100	71.049	ENSELUG00000016022	shrprbck1r	100	71.049	Esox_lucius
ENSPREG00000014689	shrprbck1r	59	52.822	ENSFHEG00000013564	sharpin	94	52.822	Fundulus_heteroclitus
ENSPREG00000014689	shrprbck1r	59	42.755	ENSGAFG00000021405	sharpin	95	42.755	Gambusia_affinis
ENSPREG00000014689	shrprbck1r	100	92.340	ENSGAFG00000009309	shrprbck1r	100	92.340	Gambusia_affinis
ENSPREG00000014689	shrprbck1r	76	77.632	ENSGACG00000002544	shrprbck1r	99	78.368	Gasterosteus_aculeatus
ENSPREG00000014689	shrprbck1r	100	76.934	ENSHBUG00000021933	shrprbck1r	100	77.075	Haplochromis_burtoni
ENSPREG00000014689	shrprbck1r	60	53.162	ENSHCOG00000018847	sharpin	81	53.630	Hippocampus_comes
ENSPREG00000014689	shrprbck1r	53	55.409	ENSIPUG00000011951	sharpin	99	55.409	Ictalurus_punctatus
ENSPREG00000014689	shrprbck1r	96	65.896	ENSIPUG00000014247	shrprbck1r	100	64.463	Ictalurus_punctatus
ENSPREG00000014689	shrprbck1r	100	76.944	ENSKMAG00000015215	shrprbck1r	100	76.944	Kryptolebias_marmoratus
ENSPREG00000014689	shrprbck1r	59	54.588	ENSKMAG00000015204	sharpin	76	54.588	Kryptolebias_marmoratus
ENSPREG00000014689	shrprbck1r	59	55.963	ENSLBEG00000016624	sharpin	96	55.963	Labrus_bergylta
ENSPREG00000014689	shrprbck1r	100	78.310	ENSLBEG00000016876	shrprbck1r	100	78.873	Labrus_bergylta
ENSPREG00000014689	shrprbck1r	95	52.907	ENSLACG00000010948	-	97	52.907	Latimeria_chalumnae
ENSPREG00000014689	shrprbck1r	100	66.203	ENSLOCG00000008910	shrprbck1r	100	66.528	Lepisosteus_oculatus
ENSPREG00000014689	shrprbck1r	100	76.629	ENSMAMG00000022930	shrprbck1r	100	76.771	Mastacembelus_armatus
ENSPREG00000014689	shrprbck1r	53	61.538	ENSMAMG00000014645	sharpin	95	61.538	Mastacembelus_armatus
ENSPREG00000014689	shrprbck1r	100	76.090	ENSMZEG00005021257	shrprbck1r	100	76.793	Maylandia_zebra
ENSPREG00000014689	shrprbck1r	100	76.231	ENSMMOG00000003764	shrprbck1r	100	76.231	Mola_mola
ENSPREG00000014689	shrprbck1r	96	77.452	ENSMALG00000008861	shrprbck1r	96	76.676	Monopterus_albus
ENSPREG00000014689	shrprbck1r	51	61.538	ENSMALG00000020528	sharpin	96	61.538	Monopterus_albus
ENSPREG00000014689	shrprbck1r	100	76.653	ENSNBRG00000002270	shrprbck1r	100	77.356	Neolamprologus_brichardi
ENSPREG00000014689	shrprbck1r	100	76.371	ENSONIG00000014401	shrprbck1r	100	77.075	Oreochromis_niloticus
ENSPREG00000014689	shrprbck1r	54	53.960	ENSONIG00000009626	-	96	53.960	Oreochromis_niloticus
ENSPREG00000014689	shrprbck1r	59	52.558	ENSORLG00000017281	sharpin	95	52.558	Oryzias_latipes
ENSPREG00000014689	shrprbck1r	100	76.023	ENSORLG00000007392	shrprbck1r	100	76.023	Oryzias_latipes
ENSPREG00000014689	shrprbck1r	59	52.535	ENSORLG00020000801	sharpin	95	52.535	Oryzias_latipes_hni
ENSPREG00000014689	shrprbck1r	100	75.882	ENSORLG00020018619	shrprbck1r	100	75.882	Oryzias_latipes_hni
ENSPREG00000014689	shrprbck1r	100	75.317	ENSORLG00015018865	shrprbck1r	100	75.317	Oryzias_latipes_hsok
ENSPREG00000014689	shrprbck1r	59	52.535	ENSORLG00015009860	sharpin	95	52.535	Oryzias_latipes_hsok
ENSPREG00000014689	shrprbck1r	100	77.856	ENSOMEG00000012749	shrprbck1r	100	77.856	Oryzias_melastigma
ENSPREG00000014689	shrprbck1r	50	65.625	ENSOMEG00000005729	sharpin	88	65.625	Oryzias_melastigma
ENSPREG00000014689	shrprbck1r	64	58.120	ENSPKIG00000018308	-	95	58.120	Paramormyrops_kingsleyae
ENSPREG00000014689	shrprbck1r	100	69.510	ENSPKIG00000006933	shrprbck1r	100	69.510	Paramormyrops_kingsleyae
ENSPREG00000014689	shrprbck1r	100	73.466	ENSPMGG00000013254	shrprbck1r	100	73.466	Periophthalmus_magnuspinnatus
ENSPREG00000014689	shrprbck1r	100	94.468	ENSPFOG00000004214	shrprbck1r	100	94.468	Poecilia_formosa
ENSPREG00000014689	shrprbck1r	59	53.364	ENSPFOG00000015253	sharpin	95	53.364	Poecilia_formosa
ENSPREG00000014689	shrprbck1r	100	94.043	ENSPLAG00000020523	shrprbck1r	100	94.043	Poecilia_latipinna
ENSPREG00000014689	shrprbck1r	59	53.596	ENSPLAG00000000423	sharpin	95	53.596	Poecilia_latipinna
ENSPREG00000014689	shrprbck1r	59	38.369	ENSPMEG00000023030	sharpin	89	39.089	Poecilia_mexicana
ENSPREG00000014689	shrprbck1r	100	94.444	ENSPMEG00000006877	shrprbck1r	100	94.444	Poecilia_mexicana
ENSPREG00000014689	shrprbck1r	100	76.512	ENSPNYG00000022601	shrprbck1r	100	77.215	Pundamilia_nyererei
ENSPREG00000014689	shrprbck1r	100	67.218	ENSPNAG00000007847	shrprbck1r	100	67.901	Pygocentrus_nattereri
ENSPREG00000014689	shrprbck1r	54	54.907	ENSPNAG00000002911	sharpin	99	55.026	Pygocentrus_nattereri
ENSPREG00000014689	shrprbck1r	62	52.263	ENSSFOG00015004028	sharpin	99	53.939	Scleropages_formosus
ENSPREG00000014689	shrprbck1r	76	63.447	ENSSFOG00015014150	-	96	63.447	Scleropages_formosus
ENSPREG00000014689	shrprbck1r	100	76.138	ENSSMAG00000018085	shrprbck1r	100	76.414	Scophthalmus_maximus
ENSPREG00000014689	shrprbck1r	100	79.155	ENSSDUG00000002959	shrprbck1r	100	79.437	Seriola_dumerili
ENSPREG00000014689	shrprbck1r	59	45.327	ENSSDUG00000019039	sharpin	96	45.327	Seriola_dumerili
ENSPREG00000014689	shrprbck1r	100	79.014	ENSSLDG00000009026	shrprbck1r	100	79.296	Seriola_lalandi_dorsalis
ENSPREG00000014689	shrprbck1r	96	78.299	ENSSPAG00000016097	shrprbck1r	99	78.299	Stegastes_partitus
ENSPREG00000014689	shrprbck1r	100	74.184	ENSTRUG00000006949	shrprbck1r	100	74.752	Takifugu_rubripes
ENSPREG00000014689	shrprbck1r	59	51.659	ENSTRUG00000011046	sharpin	96	51.896	Takifugu_rubripes
ENSPREG00000014689	shrprbck1r	54	54.937	ENSTNIG00000008521	sharpin	94	54.937	Tetraodon_nigroviridis
ENSPREG00000014689	shrprbck1r	59	41.363	ENSXCOG00000015019	sharpin	96	41.363	Xiphophorus_couchianus
ENSPREG00000014689	shrprbck1r	100	92.418	ENSXCOG00000006701	shrprbck1r	100	92.418	Xiphophorus_couchianus
ENSPREG00000014689	shrprbck1r	100	92.561	ENSXMAG00000018972	shrprbck1r	100	92.561	Xiphophorus_maculatus
ENSPREG00000014689	shrprbck1r	59	53.256	ENSXMAG00000022076	sharpin	95	53.256	Xiphophorus_maculatus