EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000014744 (Gene tree)
Gene ID: -
Gene Symbol: chd7
Alias: si:ch211-197o6.2|wu:cegs2051|wu:fb37f10|wu:fb39h04|wu:fd19h06
Full Name: chromodomain helicase DNA binding protein 7
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 37432 bases
Position: chrLG17:11897202-11934633
Accession: ZDB-GENE-070912-179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000021979	ResIII	PF04851.15	4.6e-07	1	1
ENSPREP00000021982	ResIII	PF04851.15	4.4e-06	1	1
ENSPREP00000021979	DEAD	PF00270.29	4.1e-07	1	1
ENSPREP00000021982	DEAD	PF00270.29	4.2e-06	1	1
ENSPREP00000021919	BRK	PF07533.16	2.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000022175	-	1311	-	ENSPREP00000021944	436 (aa)	-	-
ENSPRET00000022210	-	1038	-	ENSPREP00000021979	345 (aa)	-	-
ENSPRET00000022213	-	768	-	ENSPREP00000021982	255 (aa)	-	-
ENSPRET00000022150	-	5289	-	ENSPREP00000021919	1762 (aa)	-	-

Gene Model

Click here to download ENSPREG00000014744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000014744's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000014744	chd7	96	64.591	ENSPREG00000022653	chd6	72	79.146
ENSPREG00000014744	chd7	96	65.759	ENSPREG00000006473	chd9	59	70.148
ENSPREG00000014744	chd7	95	40.650	ENSPREG00000006449	-	82	52.174
ENSPREG00000014744	chd7	95	36.992	ENSPREG00000023250	smarca5	50	39.856
ENSPREG00000014744	chd7	95	41.365	ENSPREG00000020337	hells	67	39.332

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000014744	chd7	96	73.541	ENSG00000171316	CHD7	51	77.414	Homo_sapiens
ENSPREG00000014744	chd7	96	64.202	ENSG00000100888	CHD8	86	85.227	Homo_sapiens
ENSPREG00000014744	chd7	91	85.870	ENSAPOG00000009351	chd7	74	78.758	Acanthochromis_polyacanthus
ENSPREG00000014744	chd7	96	73.541	ENSAMEG00000005699	CHD7	52	74.622	Ailuropoda_melanoleuca
ENSPREG00000014744	chd7	98	83.733	ENSACIG00000001590	chd7	79	84.241	Amphilophus_citrinellus
ENSPREG00000014744	chd7	96	93.210	ENSAOCG00000002337	chd7	74	93.210	Amphiprion_ocellaris
ENSPREG00000014744	chd7	96	78.682	ENSAPEG00000010332	chd7	53	96.030	Amphiprion_percula
ENSPREG00000014744	chd7	97	82.900	ENSATEG00000002590	chd7	77	83.045	Anabas_testudineus
ENSPREG00000014744	chd7	96	73.643	ENSAPLG00000005873	CHD7	51	76.807	Anas_platyrhynchos
ENSPREG00000014744	chd7	96	73.256	ENSACAG00000005760	CHD7	55	70.181	Anolis_carolinensis
ENSPREG00000014744	chd7	96	73.541	ENSANAG00000035300	CHD7	53	74.700	Aotus_nancymaae
ENSPREG00000014744	chd7	96	62.646	ENSACLG00000019692	chd8	56	66.056	Astatotilapia_calliptera
ENSPREG00000014744	chd7	99	71.469	ENSAMXG00000006180	chd7	71	71.329	Astyanax_mexicanus
ENSPREG00000014744	chd7	96	73.541	ENSBTAG00000021841	CHD7	54	78.754	Bos_taurus
ENSPREG00000014744	chd7	96	73.541	ENSCJAG00000009025	CHD7	53	74.780	Callithrix_jacchus
ENSPREG00000014744	chd7	96	73.541	ENSCAFG00000007167	CHD7	52	74.880	Canis_familiaris
ENSPREG00000014744	chd7	96	64.202	ENSCAFG00000005626	CHD8	52	69.365	Canis_familiaris
ENSPREG00000014744	chd7	96	64.202	ENSCAFG00020014565	CHD8	67	77.673	Canis_lupus_dingo
ENSPREG00000014744	chd7	96	73.541	ENSCAFG00020015856	CHD7	52	74.880	Canis_lupus_dingo
ENSPREG00000014744	chd7	96	73.541	ENSCHIG00000011729	CHD7	52	77.427	Capra_hircus
ENSPREG00000014744	chd7	96	73.541	ENSTSYG00000004018	CHD7	50	76.981	Carlito_syrichta
ENSPREG00000014744	chd7	96	73.152	ENSCAPG00000007952	CHD7	53	70.000	Cavia_aperea
ENSPREG00000014744	chd7	96	73.541	ENSCPOG00000013385	CHD7	53	73.417	Cavia_porcellus
ENSPREG00000014744	chd7	96	73.541	ENSCCAG00000025831	CHD7	53	74.780	Cebus_capucinus
ENSPREG00000014744	chd7	96	73.541	ENSCATG00000020229	CHD7	53	74.463	Cercocebus_atys
ENSPREG00000014744	chd7	96	73.930	ENSCLAG00000004679	CHD7	55	70.520	Chinchilla_lanigera
ENSPREG00000014744	chd7	96	73.541	ENSCSAG00000014349	CHD7	53	74.463	Chlorocebus_sabaeus
ENSPREG00000014744	chd7	96	73.152	ENSCHOG00000008478	CHD7	50	90.057	Choloepus_hoffmanni
ENSPREG00000014744	chd7	96	73.643	ENSCPBG00000021517	CHD7	70	78.261	Chrysemys_picta_bellii
ENSPREG00000014744	chd7	95	55.078	ENSCSAVG00000005900	-	100	62.450	Ciona_savignyi
ENSPREG00000014744	chd7	96	73.541	ENSCANG00000041382	CHD7	53	74.361	Colobus_angolensis_palliatus
ENSPREG00000014744	chd7	96	73.541	ENSCGRG00001011949	Chd7	51	76.885	Cricetulus_griseus_chok1gshd
ENSPREG00000014744	chd7	94	79.840	ENSCSEG00000017886	chd7	75	79.164	Cynoglossus_semilaevis
ENSPREG00000014744	chd7	96	65.370	ENSCVAG00000020866	-	67	79.603	Cyprinodon_variegatus
ENSPREG00000014744	chd7	96	75.194	ENSDARG00000075211	chd7	69	86.555	Danio_rerio
ENSPREG00000014744	chd7	96	62.257	ENSDARG00000075543	chd8	55	64.230	Danio_rerio
ENSPREG00000014744	chd7	96	73.152	ENSDNOG00000011674	CHD7	55	70.482	Dasypus_novemcinctus
ENSPREG00000014744	chd7	96	73.541	ENSDORG00000003515	Chd7	55	70.592	Dipodomys_ordii
ENSPREG00000014744	chd7	96	65.370	ENSDORG00000026018	-	72	73.116	Dipodomys_ordii
ENSPREG00000014744	chd7	96	65.759	ENSEBUG00000007607	chd8	51	71.743	Eptatretus_burgeri
ENSPREG00000014744	chd7	96	73.541	ENSEASG00005016258	CHD7	52	74.940	Equus_asinus_asinus
ENSPREG00000014744	chd7	96	64.202	ENSEASG00005010882	CHD8	55	71.454	Equus_asinus_asinus
ENSPREG00000014744	chd7	96	73.541	ENSECAG00000001445	CHD7	57	74.940	Equus_caballus
ENSPREG00000014744	chd7	84	86.667	ENSEEUG00000013559	CHD7	50	86.400	Erinaceus_europaeus
ENSPREG00000014744	chd7	96	75.969	ENSELUG00000024442	chd7	64	79.555	Esox_lucius
ENSPREG00000014744	chd7	96	73.541	ENSFCAG00000003849	CHD7	50	78.328	Felis_catus
ENSPREG00000014744	chd7	96	73.643	ENSFALG00000005570	CHD7	53	74.101	Ficedula_albicollis
ENSPREG00000014744	chd7	96	73.152	ENSFDAG00000000528	CHD7	55	69.950	Fukomys_damarensis
ENSPREG00000014744	chd7	96	63.424	ENSFHEG00000017596	-	62	75.510	Fundulus_heteroclitus
ENSPREG00000014744	chd7	80	95.756	ENSFHEG00000001311	chd7	58	95.756	Fundulus_heteroclitus
ENSPREG00000014744	chd7	65	58.051	ENSFHEG00000009582	-	56	75.758	Fundulus_heteroclitus
ENSPREG00000014744	chd7	96	63.424	ENSGMOG00000015075	chd8	56	65.251	Gadus_morhua
ENSPREG00000014744	chd7	96	73.541	ENSGMOG00000004232	chd7	73	89.011	Gadus_morhua
ENSPREG00000014744	chd7	96	73.643	ENSGALG00000041080	CHD7	53	74.760	Gallus_gallus
ENSPREG00000014744	chd7	96	63.813	ENSGALG00000036191	-	66	77.557	Gallus_gallus
ENSPREG00000014744	chd7	99	96.480	ENSGAFG00000006858	chd7	69	96.480	Gambusia_affinis
ENSPREG00000014744	chd7	96	66.260	ENSGAFG00000015210	-	96	55.217	Gambusia_affinis
ENSPREG00000014744	chd7	96	75.581	ENSGACG00000014897	chd7	75	75.897	Gasterosteus_aculeatus
ENSPREG00000014744	chd7	96	62.646	ENSGACG00000014096	chd8	54	65.345	Gasterosteus_aculeatus
ENSPREG00000014744	chd7	96	73.643	ENSGAGG00000017996	CHD7	74	75.954	Gopherus_agassizii
ENSPREG00000014744	chd7	96	64.202	ENSGAGG00000022951	CHD8	76	67.154	Gopherus_agassizii
ENSPREG00000014744	chd7	96	73.541	ENSGGOG00000012224	CHD7	51	77.498	Gorilla_gorilla
ENSPREG00000014744	chd7	96	79.070	ENSHBUG00000019225	chd7	56	94.075	Haplochromis_burtoni
ENSPREG00000014744	chd7	96	73.541	ENSHGLG00000017268	CHD7	52	76.510	Heterocephalus_glaber_female
ENSPREG00000014744	chd7	96	73.541	ENSHGLG00100015649	CHD7	55	70.058	Heterocephalus_glaber_male
ENSPREG00000014744	chd7	96	62.934	ENSHCOG00000016611	chd8	56	65.481	Hippocampus_comes
ENSPREG00000014744	chd7	83	90.654	ENSHCOG00000014380	chd7	75	77.834	Hippocampus_comes
ENSPREG00000014744	chd7	96	64.202	ENSHCOG00000012108	-	61	78.098	Hippocampus_comes
ENSPREG00000014744	chd7	92	71.578	ENSIPUG00000007585	chd7	69	71.311	Ictalurus_punctatus
ENSPREG00000014744	chd7	96	73.541	ENSJJAG00000022064	Chd7	53	74.361	Jaculus_jaculus
ENSPREG00000014744	chd7	96	65.370	ENSJJAG00000010052	-	67	76.139	Jaculus_jaculus
ENSPREG00000014744	chd7	96	79.070	ENSKMAG00000009724	chd7	55	94.185	Kryptolebias_marmoratus
ENSPREG00000014744	chd7	96	75.969	ENSLBEG00000020842	chd7	53	91.571	Labrus_bergylta
ENSPREG00000014744	chd7	96	72.868	ENSLACG00000002461	CHD7	52	75.203	Latimeria_chalumnae
ENSPREG00000014744	chd7	96	73.541	ENSLAFG00000000403	CHD7	51	77.387	Loxodonta_africana
ENSPREG00000014744	chd7	96	73.541	ENSMFAG00000041825	CHD7	61	77.498	Macaca_fascicularis
ENSPREG00000014744	chd7	96	73.541	ENSMMUG00000011584	CHD7	51	77.498	Macaca_mulatta
ENSPREG00000014744	chd7	96	73.541	ENSMNEG00000040978	CHD7	51	77.498	Macaca_nemestrina
ENSPREG00000014744	chd7	96	73.541	ENSMLEG00000038817	CHD7	53	74.463	Mandrillus_leucophaeus
ENSPREG00000014744	chd7	96	77.907	ENSMAMG00000011569	chd7	50	93.410	Mastacembelus_armatus
ENSPREG00000014744	chd7	96	79.070	ENSMZEG00005010646	chd7	56	94.075	Maylandia_zebra
ENSPREG00000014744	chd7	96	73.643	ENSMGAG00000011092	CHD7	53	74.580	Meleagris_gallopavo
ENSPREG00000014744	chd7	96	73.541	ENSMAUG00000001000	Chd7	53	76.802	Mesocricetus_auratus
ENSPREG00000014744	chd7	96	64.202	ENSMAUG00000015827	Chd8	51	64.167	Mesocricetus_auratus
ENSPREG00000014744	chd7	96	73.541	ENSMICG00000002430	CHD7	50	77.414	Microcebus_murinus
ENSPREG00000014744	chd7	96	73.930	ENSMOCG00000011408	Chd7	51	77.224	Microtus_ochrogaster
ENSPREG00000014744	chd7	96	73.643	ENSMODG00000008488	CHD7	51	76.559	Monodelphis_domestica
ENSPREG00000014744	chd7	99	93.424	ENSMALG00000004389	chd7	72	93.424	Monopterus_albus
ENSPREG00000014744	chd7	96	64.202	MGP_CAROLIEiJ_G0019237	Chd8	53	65.655	Mus_caroli
ENSPREG00000014744	chd7	96	73.541	MGP_CAROLIEiJ_G0025797	Chd7	51	77.265	Mus_caroli
ENSPREG00000014744	chd7	96	73.541	ENSMUSG00000041235	Chd7	51	76.135	Mus_musculus
ENSPREG00000014744	chd7	96	64.202	ENSMUSG00000053754	Chd8	61	58.100	Mus_musculus
ENSPREG00000014744	chd7	96	64.202	MGP_PahariEiJ_G0030258	Chd8	53	65.680	Mus_pahari
ENSPREG00000014744	chd7	96	73.541	MGP_PahariEiJ_G0023920	Chd7	51	76.548	Mus_pahari
ENSPREG00000014744	chd7	96	73.541	MGP_SPRETEiJ_G0026745	Chd7	51	77.090	Mus_spretus
ENSPREG00000014744	chd7	96	73.541	ENSMPUG00000002338	CHD7	53	74.320	Mustela_putorius_furo
ENSPREG00000014744	chd7	96	73.541	ENSMLUG00000015266	CHD7	51	73.246	Myotis_lucifugus
ENSPREG00000014744	chd7	96	73.541	ENSNGAG00000010767	Chd7	53	74.620	Nannospalax_galili
ENSPREG00000014744	chd7	96	65.370	ENSNGAG00000017135	-	72	73.367	Nannospalax_galili
ENSPREG00000014744	chd7	95	81.187	ENSNBRG00000001280	chd7	75	81.187	Neolamprologus_brichardi
ENSPREG00000014744	chd7	96	73.152	ENSNLEG00000002027	CHD7	51	77.330	Nomascus_leucogenys
ENSPREG00000014744	chd7	96	60.700	ENSOPRG00000016120	CHD8	50	68.150	Ochotona_princeps
ENSPREG00000014744	chd7	96	65.370	ENSODEG00000015358	-	72	72.864	Octodon_degus
ENSPREG00000014744	chd7	96	73.541	ENSODEG00000002424	CHD7	51	76.802	Octodon_degus
ENSPREG00000014744	chd7	96	81.961	ENSONIG00000016614	chd7	57	81.532	Oreochromis_niloticus
ENSPREG00000014744	chd7	96	73.643	ENSOANG00000005042	CHD7	56	77.797	Ornithorhynchus_anatinus
ENSPREG00000014744	chd7	93	63.454	ENSOANG00000013276	-	100	77.745	Ornithorhynchus_anatinus
ENSPREG00000014744	chd7	96	73.541	ENSOCUG00000010034	CHD7	64	77.417	Oryctolagus_cuniculus
ENSPREG00000014744	chd7	96	64.202	ENSOCUG00000010822	CHD8	50	69.311	Oryctolagus_cuniculus
ENSPREG00000014744	chd7	96	77.132	ENSORLG00000013492	chd7	50	92.999	Oryzias_latipes
ENSPREG00000014744	chd7	96	76.744	ENSORLG00020020002	chd7	50	92.894	Oryzias_latipes_hni
ENSPREG00000014744	chd7	96	77.132	ENSORLG00015020858	chd7	50	92.999	Oryzias_latipes_hsok
ENSPREG00000014744	chd7	96	77.132	ENSOMEG00000016881	chd7	50	92.723	Oryzias_melastigma
ENSPREG00000014744	chd7	96	73.541	ENSOGAG00000013905	CHD7	51	77.498	Otolemur_garnettii
ENSPREG00000014744	chd7	96	73.541	ENSOARG00000016176	CHD7	51	74.263	Ovis_aries
ENSPREG00000014744	chd7	96	73.541	ENSPPAG00000033330	CHD7	51	77.414	Pan_paniscus
ENSPREG00000014744	chd7	96	73.541	ENSPPRG00000022248	CHD7	50	77.330	Panthera_pardus
ENSPREG00000014744	chd7	96	73.541	ENSPTRG00000020286	CHD7	51	77.414	Pan_troglodytes
ENSPREG00000014744	chd7	96	73.541	ENSPANG00000018419	CHD7	53	74.463	Papio_anubis
ENSPREG00000014744	chd7	96	74.419	ENSPKIG00000009637	chd7	54	71.215	Paramormyrops_kingsleyae
ENSPREG00000014744	chd7	96	74.031	ENSPSIG00000012003	CHD7	55	69.957	Pelodiscus_sinensis
ENSPREG00000014744	chd7	96	65.323	ENSPMGG00000019850	chd8	91	62.136	Periophthalmus_magnuspinnatus
ENSPREG00000014744	chd7	96	76.357	ENSPMGG00000018543	chd7	73	90.851	Periophthalmus_magnuspinnatus
ENSPREG00000014744	chd7	96	73.541	ENSPEMG00000023028	Chd7	52	77.076	Peromyscus_maniculatus_bairdii
ENSPREG00000014744	chd7	96	64.202	ENSPCIG00000020931	CHD8	58	69.805	Phascolarctos_cinereus
ENSPREG00000014744	chd7	84	65.799	ENSPCIG00000000025	-	55	71.102	Phascolarctos_cinereus
ENSPREG00000014744	chd7	96	64.591	ENSPFOG00000010939	-	64	66.580	Poecilia_formosa
ENSPREG00000014744	chd7	99	96.791	ENSPFOG00000004891	chd7	73	94.872	Poecilia_formosa
ENSPREG00000014744	chd7	80	96.687	ENSPLAG00000023322	chd7	57	96.687	Poecilia_latipinna
ENSPREG00000014744	chd7	99	90.620	ENSPMEG00000005879	chd7	76	90.620	Poecilia_mexicana
ENSPREG00000014744	chd7	96	64.591	ENSPMEG00000000676	-	63	80.412	Poecilia_mexicana
ENSPREG00000014744	chd7	96	73.541	ENSPPYG00000018618	CHD7	51	77.414	Pongo_abelii
ENSPREG00000014744	chd7	96	73.541	ENSPCOG00000013850	CHD7	51	77.246	Propithecus_coquereli
ENSPREG00000014744	chd7	96	79.070	ENSPNYG00000012490	chd7	76	79.214	Pundamilia_nyererei
ENSPREG00000014744	chd7	96	74.806	ENSPNAG00000011245	chd7	75	69.717	Pygocentrus_nattereri
ENSPREG00000014744	chd7	96	73.541	ENSRNOG00000006689	Chd7	52	76.961	Rattus_norvegicus
ENSPREG00000014744	chd7	96	73.541	ENSRBIG00000043575	CHD7	53	74.383	Rhinopithecus_bieti
ENSPREG00000014744	chd7	96	73.541	ENSRROG00000008981	CHD7	53	74.383	Rhinopithecus_roxellana
ENSPREG00000014744	chd7	96	73.541	ENSSBOG00000021462	CHD7	51	76.910	Saimiri_boliviensis_boliviensis
ENSPREG00000014744	chd7	96	73.643	ENSSHAG00000011522	CHD7	51	74.919	Sarcophilus_harrisii
ENSPREG00000014744	chd7	96	75.194	ENSSFOG00015015077	chd7	53	72.419	Scleropages_formosus
ENSPREG00000014744	chd7	71	83.684	ENSSMAG00000001097	-	98	85.116	Scophthalmus_maximus
ENSPREG00000014744	chd7	96	78.682	ENSSDUG00000013773	chd7	57	92.739	Seriola_dumerili
ENSPREG00000014744	chd7	96	64.202	ENSSARG00000004849	CHD8	54	64.844	Sorex_araneus
ENSPREG00000014744	chd7	96	73.256	ENSSPUG00000009235	CHD7	55	75.041	Sphenodon_punctatus
ENSPREG00000014744	chd7	96	94.021	ENSSPAG00000006320	chd7	71	94.021	Stegastes_partitus
ENSPREG00000014744	chd7	96	73.541	ENSSSCG00000006231	CHD7	52	77.076	Sus_scrofa
ENSPREG00000014744	chd7	96	72.868	ENSTGUG00000011196	CHD7	53	74.181	Taeniopygia_guttata
ENSPREG00000014744	chd7	97	91.241	ENSTRUG00000008632	chd7	83	91.241	Takifugu_rubripes
ENSPREG00000014744	chd7	96	64.981	ENSTRUG00000006682	chd8	70	71.139	Takifugu_rubripes
ENSPREG00000014744	chd7	88	93.333	ENSTNIG00000002647	chd7	74	77.841	Tetraodon_nigroviridis
ENSPREG00000014744	chd7	96	73.541	ENSUAMG00000025734	CHD7	57	78.723	Ursus_americanus
ENSPREG00000014744	chd7	96	64.202	ENSUAMG00000004198	CHD8	89	74.221	Ursus_americanus
ENSPREG00000014744	chd7	96	64.202	ENSUMAG00000004045	CHD8	63	69.763	Ursus_maritimus
ENSPREG00000014744	chd7	96	73.541	ENSUMAG00000010436	CHD7	68	77.523	Ursus_maritimus
ENSPREG00000014744	chd7	96	73.541	ENSVVUG00000018063	CHD7	52	74.880	Vulpes_vulpes
ENSPREG00000014744	chd7	96	63.035	ENSXETG00000017194	CHD8	59	80.570	Xenopus_tropicalis
ENSPREG00000014744	chd7	96	74.319	ENSXETG00000026004	chd8	52	78.101	Xenopus_tropicalis
ENSPREG00000014744	chd7	80	96.687	ENSXMAG00000018590	chd7	58	96.687	Xiphophorus_maculatus