EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000014823 (Gene tree)
Gene ID: 103468256
Gene Symbol: -
Alias: -
Full Name: transcription activator BRG1-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 14441 bases
Position: chrLG1:23708233-23722673
Accession: 103468256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000022029	ResIII	PF04851.15	1.6e-08	1	1
ENSPREP00000022059	ResIII	PF04851.15	1.8e-08	1	1
ENSPREP00000022059	BRK	PF07533.16	6.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000022260	-	4527	-	ENSPREP00000022029	1508 (aa)	-	-
ENSPRET00000022288	-	4942	XM_008415204	ENSPREP00000022059	1642 (aa)	XP_008413426	-

Gene Model

Click here to download ENSPREG00000014823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000014823's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000014823	-	98	71.151	ENSPREG00000013800	SMARCA2	93	71.371
ENSPREG00000014823	-	97	83.105	ENSPREG00000014608	smarca4a	94	86.569

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000014823	-	97	84.220	ENSG00000127616	SMARCA4	99	95.652	Homo_sapiens
ENSPREG00000014823	-	79	84.423	ENSAPOG00000003509	smarca4a	98	83.521	Acanthochromis_polyacanthus
ENSPREG00000014823	-	96	95.172	ENSAPOG00000004542	SMARCA4	98	95.298	Acanthochromis_polyacanthus
ENSPREG00000014823	-	97	82.044	ENSAMEG00000010868	SMARCA4	96	81.796	Ailuropoda_melanoleuca
ENSPREG00000014823	-	96	85.174	ENSACIG00000021550	smarca4a	94	85.435	Amphilophus_citrinellus
ENSPREG00000014823	-	94	91.967	ENSACIG00000003035	-	97	92.376	Amphilophus_citrinellus
ENSPREG00000014823	-	95	90.555	ENSAOCG00000009450	-	97	92.470	Amphiprion_ocellaris
ENSPREG00000014823	-	88	84.820	ENSAOCG00000019167	smarca4a	100	84.593	Amphiprion_ocellaris
ENSPREG00000014823	-	88	84.698	ENSAPEG00000015559	smarca4a	100	84.543	Amphiprion_percula
ENSPREG00000014823	-	99	93.399	ENSAPEG00000023108	-	99	93.203	Amphiprion_percula
ENSPREG00000014823	-	98	92.170	ENSATEG00000001094	-	99	92.303	Anabas_testudineus
ENSPREG00000014823	-	95	89.943	ENSATEG00000011524	smarca4a	95	85.463	Anabas_testudineus
ENSPREG00000014823	-	97	84.053	ENSANAG00000036991	SMARCA4	94	83.282	Aotus_nancymaae
ENSPREG00000014823	-	98	94.640	ENSACLG00000008638	-	100	94.455	Astatotilapia_calliptera
ENSPREG00000014823	-	98	82.828	ENSACLG00000000163	smarca4a	96	85.409	Astatotilapia_calliptera
ENSPREG00000014823	-	97	84.176	ENSAMXG00000021023	smarca4a	99	83.584	Astyanax_mexicanus
ENSPREG00000014823	-	95	86.713	ENSAMXG00000011238	-	99	86.242	Astyanax_mexicanus
ENSPREG00000014823	-	97	84.746	ENSBTAG00000019220	SMARCA4	96	84.178	Bos_taurus
ENSPREG00000014823	-	93	89.688	ENSCJAG00000005936	SMARCA4	89	91.870	Callithrix_jacchus
ENSPREG00000014823	-	97	84.408	ENSCAFG00000017584	SMARCA4	94	87.183	Canis_familiaris
ENSPREG00000014823	-	97	84.408	ENSCAFG00020024620	SMARCA4	99	82.274	Canis_lupus_dingo
ENSPREG00000014823	-	97	80.940	ENSCHIG00000015318	SMARCA4	99	77.582	Capra_hircus
ENSPREG00000014823	-	97	84.683	ENSTSYG00000012966	SMARCA4	94	86.907	Carlito_syrichta
ENSPREG00000014823	-	93	81.661	ENSCAPG00000015932	SMARCA4	94	89.759	Cavia_aperea
ENSPREG00000014823	-	96	84.451	ENSCPOG00000015549	SMARCA4	94	87.107	Cavia_porcellus
ENSPREG00000014823	-	97	82.018	ENSCCAG00000031660	SMARCA4	93	83.524	Cebus_capucinus
ENSPREG00000014823	-	97	84.220	ENSCATG00000029530	SMARCA4	94	87.107	Cercocebus_atys
ENSPREG00000014823	-	98	82.565	ENSCLAG00000011946	SMARCA4	99	81.899	Chinchilla_lanigera
ENSPREG00000014823	-	96	83.448	ENSCPBG00000009994	SMARCA4	99	81.356	Chrysemys_picta_bellii
ENSPREG00000014823	-	97	84.220	ENSCANG00000036013	SMARCA4	94	87.107	Colobus_angolensis_palliatus
ENSPREG00000014823	-	97	84.283	ENSCGRG00001016732	Smarca4	95	84.548	Cricetulus_griseus_chok1gshd
ENSPREG00000014823	-	97	84.283	ENSCGRG00000017242	Smarca4	95	84.548	Cricetulus_griseus_crigri
ENSPREG00000014823	-	93	84.424	ENSCSEG00000014771	smarca4a	95	84.436	Cynoglossus_semilaevis
ENSPREG00000014823	-	98	80.336	ENSCVAG00000006979	smarca4a	95	84.025	Cyprinodon_variegatus
ENSPREG00000014823	-	95	93.550	ENSCVAG00000003018	-	96	94.824	Cyprinodon_variegatus
ENSPREG00000014823	-	93	83.940	ENSDARG00000104339	SMARCA4	94	83.431	Danio_rerio
ENSPREG00000014823	-	96	85.750	ENSDARG00000077226	smarca4a	95	85.741	Danio_rerio
ENSPREG00000014823	-	97	80.158	ENSDNOG00000048847	SMARCA4	90	90.333	Dasypus_novemcinctus
ENSPREG00000014823	-	87	78.750	ENSDORG00000002544	Smarca4	86	84.442	Dipodomys_ordii
ENSPREG00000014823	-	95	73.704	ENSETEG00000013361	SMARCA4	94	73.780	Echinops_telfairi
ENSPREG00000014823	-	98	83.937	ENSEASG00005006167	SMARCA4	98	83.531	Equus_asinus_asinus
ENSPREG00000014823	-	97	84.220	ENSECAG00000008334	SMARCA4	94	86.953	Equus_caballus
ENSPREG00000014823	-	98	82.914	ENSELUG00000023232	-	94	83.024	Esox_lucius
ENSPREG00000014823	-	99	82.859	ENSELUG00000010247	smarca4a	99	81.686	Esox_lucius
ENSPREG00000014823	-	97	84.312	ENSFCAG00000004894	SMARCA4	94	86.983	Felis_catus
ENSPREG00000014823	-	93	81.564	ENSFALG00000004208	SMARCA4	95	81.309	Ficedula_albicollis
ENSPREG00000014823	-	93	83.927	ENSFDAG00000012237	SMARCA4	97	84.156	Fukomys_damarensis
ENSPREG00000014823	-	98	98.139	ENSFHEG00000007902	-	97	98.139	Fundulus_heteroclitus
ENSPREG00000014823	-	98	79.753	ENSFHEG00000010182	smarca4a	99	81.749	Fundulus_heteroclitus
ENSPREG00000014823	-	90	86.709	ENSGMOG00000005756	-	84	86.739	Gadus_morhua
ENSPREG00000014823	-	83	83.740	ENSGMOG00000002649	smarca4a	85	83.858	Gadus_morhua
ENSPREG00000014823	-	74	81.811	ENSGALG00000047145	SMARCA4	100	83.008	Gallus_gallus
ENSPREG00000014823	-	99	94.351	ENSGAFG00000008827	-	99	94.351	Gambusia_affinis
ENSPREG00000014823	-	88	84.838	ENSGAFG00000014900	smarca4a	96	84.599	Gambusia_affinis
ENSPREG00000014823	-	93	84.866	ENSGACG00000006691	smarca4a	95	83.344	Gasterosteus_aculeatus
ENSPREG00000014823	-	97	86.581	ENSGACG00000016033	-	96	86.207	Gasterosteus_aculeatus
ENSPREG00000014823	-	96	83.835	ENSGAGG00000016757	SMARCA4	99	81.447	Gopherus_agassizii
ENSPREG00000014823	-	97	84.630	ENSGGOG00000009882	SMARCA4	94	87.107	Gorilla_gorilla
ENSPREG00000014823	-	96	94.515	ENSHBUG00000005447	-	99	91.045	Haplochromis_burtoni
ENSPREG00000014823	-	96	84.959	ENSHBUG00000021172	smarca4a	95	85.588	Haplochromis_burtoni
ENSPREG00000014823	-	96	84.092	ENSHGLG00000010519	SMARCA4	95	84.303	Heterocephalus_glaber_female
ENSPREG00000014823	-	96	83.792	ENSHGLG00100013774	SMARCA4	95	84.023	Heterocephalus_glaber_male
ENSPREG00000014823	-	98	81.708	ENSHCOG00000009510	smarca4a	96	85.076	Hippocampus_comes
ENSPREG00000014823	-	96	86.066	ENSIPUG00000006107	smarca4a	97	84.303	Ictalurus_punctatus
ENSPREG00000014823	-	96	83.129	ENSIPUG00000016346	-	84	90.532	Ictalurus_punctatus
ENSPREG00000014823	-	97	84.793	ENSSTOG00000007939	SMARCA4	94	87.030	Ictidomys_tridecemlineatus
ENSPREG00000014823	-	97	82.861	ENSJJAG00000012877	Smarca4	95	83.241	Jaculus_jaculus
ENSPREG00000014823	-	98	82.409	ENSKMAG00000011931	smarca4a	98	82.068	Kryptolebias_marmoratus
ENSPREG00000014823	-	98	96.646	ENSKMAG00000019518	-	97	96.646	Kryptolebias_marmoratus
ENSPREG00000014823	-	98	82.015	ENSLBEG00000017383	smarca4a	97	81.179	Labrus_bergylta
ENSPREG00000014823	-	96	86.212	ENSLBEG00000020655	-	94	92.119	Labrus_bergylta
ENSPREG00000014823	-	53	76.975	ENSLACG00000015309	SMARCA4	100	77.036	Latimeria_chalumnae
ENSPREG00000014823	-	97	81.721	ENSLOCG00000007820	smarca4a	95	80.473	Lepisosteus_oculatus
ENSPREG00000014823	-	97	84.250	ENSLAFG00000001433	SMARCA4	94	86.907	Loxodonta_africana
ENSPREG00000014823	-	97	84.220	ENSMFAG00000032146	SMARCA4	93	87.107	Macaca_fascicularis
ENSPREG00000014823	-	97	84.220	ENSMMUG00000012042	SMARCA4	97	88.757	Macaca_mulatta
ENSPREG00000014823	-	97	84.620	ENSMNEG00000028512	SMARCA4	94	87.107	Macaca_nemestrina
ENSPREG00000014823	-	97	84.230	ENSMLEG00000034976	SMARCA4	94	86.907	Mandrillus_leucophaeus
ENSPREG00000014823	-	93	88.464	ENSMAMG00000009256	smarca4a	95	85.255	Mastacembelus_armatus
ENSPREG00000014823	-	96	94.410	ENSMAMG00000002841	-	95	94.410	Mastacembelus_armatus
ENSPREG00000014823	-	98	94.383	ENSMZEG00005023861	-	100	94.321	Maylandia_zebra
ENSPREG00000014823	-	98	82.828	ENSMZEG00005003889	smarca4a	95	85.472	Maylandia_zebra
ENSPREG00000014823	-	97	84.125	ENSMAUG00000020731	Smarca4	94	86.677	Mesocricetus_auratus
ENSPREG00000014823	-	97	84.270	ENSMICG00000009806	SMARCA4	94	86.983	Microcebus_murinus
ENSPREG00000014823	-	97	83.812	ENSMOCG00000022209	Smarca4	94	86.447	Microtus_ochrogaster
ENSPREG00000014823	-	96	82.461	ENSMMOG00000007571	smarca4a	98	83.796	Mola_mola
ENSPREG00000014823	-	99	91.744	ENSMMOG00000008466	-	98	91.054	Mola_mola
ENSPREG00000014823	-	97	82.780	ENSMODG00000006287	SMARCA4	95	83.591	Monodelphis_domestica
ENSPREG00000014823	-	91	86.458	ENSMALG00000021534	-	99	89.017	Monopterus_albus
ENSPREG00000014823	-	96	81.210	ENSMALG00000003388	smarca4a	95	85.060	Monopterus_albus
ENSPREG00000014823	-	97	84.095	MGP_CAROLIEiJ_G0031879	Smarca4	100	86.929	Mus_caroli
ENSPREG00000014823	-	97	84.095	ENSMUSG00000032187	Smarca4	99	86.929	Mus_musculus
ENSPREG00000014823	-	97	84.495	MGP_PahariEiJ_G0014745	Smarca4	100	86.840	Mus_pahari
ENSPREG00000014823	-	97	84.095	MGP_SPRETEiJ_G0033003	Smarca4	100	86.929	Mus_spretus
ENSPREG00000014823	-	97	84.346	ENSMPUG00000005711	SMARCA4	94	87.107	Mustela_putorius_furo
ENSPREG00000014823	-	97	84.881	ENSMLUG00000004491	-	94	87.030	Myotis_lucifugus
ENSPREG00000014823	-	97	84.432	ENSNGAG00000021852	Smarca4	95	84.412	Nannospalax_galili
ENSPREG00000014823	-	88	90.302	ENSNBRG00000018865	-	99	90.733	Neolamprologus_brichardi
ENSPREG00000014823	-	94	85.502	ENSNBRG00000011457	smarca4a	96	84.932	Neolamprologus_brichardi
ENSPREG00000014823	-	97	80.649	ENSNLEG00000012389	SMARCA4	94	81.093	Nomascus_leucogenys
ENSPREG00000014823	-	78	96.552	ENSOPRG00000000885	-	76	96.552	Ochotona_princeps
ENSPREG00000014823	-	98	82.774	ENSODEG00000017127	SMARCA4	99	81.697	Octodon_degus
ENSPREG00000014823	-	96	84.833	ENSONIG00000008196	smarca4a	95	85.337	Oreochromis_niloticus
ENSPREG00000014823	-	96	94.704	ENSONIG00000018040	-	95	94.641	Oreochromis_niloticus
ENSPREG00000014823	-	97	78.977	ENSOCUG00000001787	SMARCA4	98	76.564	Oryctolagus_cuniculus
ENSPREG00000014823	-	93	93.420	ENSORLG00000003955	-	95	93.459	Oryzias_latipes
ENSPREG00000014823	-	93	84.399	ENSORLG00000015452	smarca4a	99	80.424	Oryzias_latipes
ENSPREG00000014823	-	93	93.359	ENSORLG00020009728	-	95	93.400	Oryzias_latipes_hni
ENSPREG00000014823	-	93	84.138	ENSORLG00020004611	smarca4a	99	82.556	Oryzias_latipes_hni
ENSPREG00000014823	-	96	92.642	ENSORLG00015007739	-	95	92.956	Oryzias_latipes_hsok
ENSPREG00000014823	-	93	84.204	ENSORLG00015016560	smarca4a	99	79.913	Oryzias_latipes_hsok
ENSPREG00000014823	-	98	81.398	ENSOMEG00000007486	smarca4a	99	80.762	Oryzias_melastigma
ENSPREG00000014823	-	93	93.807	ENSOMEG00000016626	-	95	93.770	Oryzias_melastigma
ENSPREG00000014823	-	91	83.056	ENSOGAG00000016148	SMARCA4	100	82.724	Otolemur_garnettii
ENSPREG00000014823	-	97	84.379	ENSOARG00000017454	SMARCA4	92	84.791	Ovis_aries
ENSPREG00000014823	-	97	84.220	ENSPPAG00000043191	SMARCA4	94	87.107	Pan_paniscus
ENSPREG00000014823	-	97	84.312	ENSPPRG00000000064	SMARCA4	94	86.983	Panthera_pardus
ENSPREG00000014823	-	89	87.971	ENSPTIG00000017447	SMARCA4	99	76.870	Panthera_tigris_altaica
ENSPREG00000014823	-	97	84.220	ENSPTRG00000010488	SMARCA4	94	87.107	Pan_troglodytes
ENSPREG00000014823	-	97	84.336	ENSPANG00000011042	SMARCA4	93	87.107	Papio_anubis
ENSPREG00000014823	-	98	86.544	ENSPKIG00000007770	SMARCA4	98	85.733	Paramormyrops_kingsleyae
ENSPREG00000014823	-	93	86.396	ENSPKIG00000010087	-	96	82.208	Paramormyrops_kingsleyae
ENSPREG00000014823	-	96	78.070	ENSPSIG00000005547	SMARCA4	99	78.264	Pelodiscus_sinensis
ENSPREG00000014823	-	97	84.000	ENSPEMG00000020389	Smarca4	94	86.524	Peromyscus_maniculatus_bairdii
ENSPREG00000014823	-	97	83.770	ENSPCIG00000017138	SMARCA4	95	84.789	Phascolarctos_cinereus
ENSPREG00000014823	-	97	83.500	ENSPFOG00000007892	smarca4a	95	83.667	Poecilia_formosa
ENSPREG00000014823	-	98	99.379	ENSPFOG00000012930	-	97	99.379	Poecilia_formosa
ENSPREG00000014823	-	100	92.346	ENSPLAG00000018616	-	100	92.346	Poecilia_latipinna
ENSPREG00000014823	-	98	83.235	ENSPLAG00000014294	smarca4a	99	83.432	Poecilia_latipinna
ENSPREG00000014823	-	97	83.562	ENSPMEG00000003725	smarca4a	99	80.869	Poecilia_mexicana
ENSPREG00000014823	-	100	98.904	ENSPMEG00000008929	-	100	98.904	Poecilia_mexicana
ENSPREG00000014823	-	97	83.447	ENSPPYG00000009568	SMARCA4	95	83.364	Pongo_abelii
ENSPREG00000014823	-	77	90.110	ENSPCAG00000014054	SMARCA4	73	89.888	Procavia_capensis
ENSPREG00000014823	-	97	84.586	ENSPCOG00000023011	SMARCA4	94	86.697	Propithecus_coquereli
ENSPREG00000014823	-	92	75.862	ENSPVAG00000007787	SMARCA4	85	93.750	Pteropus_vampyrus
ENSPREG00000014823	-	98	85.304	ENSPNYG00000000717	smarca4a	96	85.463	Pundamilia_nyererei
ENSPREG00000014823	-	94	91.831	ENSPNYG00000023995	-	98	92.172	Pundamilia_nyererei
ENSPREG00000014823	-	99	83.937	ENSPNAG00000006636	-	96	86.200	Pygocentrus_nattereri
ENSPREG00000014823	-	97	85.195	ENSPNAG00000024136	smarca4a	98	84.399	Pygocentrus_nattereri
ENSPREG00000014823	-	97	84.158	ENSRNOG00000009271	Smarca4	94	86.723	Rattus_norvegicus
ENSPREG00000014823	-	97	84.693	ENSRBIG00000038696	SMARCA4	93	87.107	Rhinopithecus_bieti
ENSPREG00000014823	-	97	84.220	ENSRROG00000045509	SMARCA4	94	87.107	Rhinopithecus_roxellana
ENSPREG00000014823	-	97	84.220	ENSSBOG00000026896	SMARCA4	94	87.107	Saimiri_boliviensis_boliviensis
ENSPREG00000014823	-	97	83.521	ENSSHAG00000001642	SMARCA4	95	84.664	Sarcophilus_harrisii
ENSPREG00000014823	-	95	80.921	ENSSFOG00015009921	-	90	87.902	Scleropages_formosus
ENSPREG00000014823	-	97	86.872	ENSSFOG00015013823	smarca4	97	84.244	Scleropages_formosus
ENSPREG00000014823	-	97	84.919	ENSSMAG00000003200	smarca4a	95	84.398	Scophthalmus_maximus
ENSPREG00000014823	-	100	89.758	ENSSMAG00000014082	-	99	90.915	Scophthalmus_maximus
ENSPREG00000014823	-	97	80.100	ENSSDUG00000017298	smarca4a	99	77.427	Seriola_dumerili
ENSPREG00000014823	-	98	93.723	ENSSDUG00000005388	-	98	95.289	Seriola_dumerili
ENSPREG00000014823	-	96	90.915	ENSSLDG00000023663	-	99	91.519	Seriola_lalandi_dorsalis
ENSPREG00000014823	-	97	85.213	ENSSLDG00000024486	smarca4a	100	83.487	Seriola_lalandi_dorsalis
ENSPREG00000014823	-	65	97.516	ENSSARG00000013477	SMARCA4	83	97.516	Sorex_araneus
ENSPREG00000014823	-	96	81.665	ENSSPUG00000004558	SMARCA4	98	81.493	Sphenodon_punctatus
ENSPREG00000014823	-	98	84.585	ENSSPAG00000004248	smarca4a	99	83.938	Stegastes_partitus
ENSPREG00000014823	-	96	94.934	ENSSPAG00000012533	-	95	95.184	Stegastes_partitus
ENSPREG00000014823	-	97	84.375	ENSSSCG00000013629	SMARCA4	94	86.907	Sus_scrofa
ENSPREG00000014823	-	51	85.377	ENSTGUG00000015488	-	99	85.395	Taeniopygia_guttata
ENSPREG00000014823	-	98	90.994	ENSTRUG00000001378	SMARCA4	99	90.994	Takifugu_rubripes
ENSPREG00000014823	-	91	79.520	ENSTRUG00000004885	smarca4a	100	81.547	Takifugu_rubripes
ENSPREG00000014823	-	97	89.938	ENSTNIG00000004536	SMARCA4	95	89.924	Tetraodon_nigroviridis
ENSPREG00000014823	-	71	83.929	ENSTNIG00000004859	-	100	83.688	Tetraodon_nigroviridis
ENSPREG00000014823	-	51	100.000	ENSTBEG00000000707	-	52	100.000	Tupaia_belangeri
ENSPREG00000014823	-	96	82.520	ENSTTRG00000009519	SMARCA4	95	82.611	Tursiops_truncatus
ENSPREG00000014823	-	97	84.408	ENSUAMG00000014661	SMARCA4	94	87.183	Ursus_americanus
ENSPREG00000014823	-	92	91.090	ENSUMAG00000022005	SMARCA4	95	90.767	Ursus_maritimus
ENSPREG00000014823	-	97	84.408	ENSVVUG00000017820	SMARCA4	91	87.183	Vulpes_vulpes
ENSPREG00000014823	-	97	80.296	ENSXETG00000009355	smarca4	99	77.547	Xenopus_tropicalis
ENSPREG00000014823	-	99	94.008	ENSXCOG00000013494	-	99	94.008	Xiphophorus_couchianus
ENSPREG00000014823	-	98	99.296	ENSXMAG00000007030	-	97	98.881	Xiphophorus_maculatus
ENSPREG00000014823	-	97	81.481	ENSXMAG00000006321	smarca4a	100	81.947	Xiphophorus_maculatus