EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPREG00000014875 (Gene tree)
Gene ID
103457156
Gene Symbol
cpsf3
Alias
si:dkey-81b15.1|wu:fc32f10|zgc:101655
Full Name
cleavage and polyadenylation specificity factor subunit 3-like
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Minus strand
Length
6694 bases
Position
chrLG21:1910716-1917409
Accession
103457156
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000022035CPSF73-100_CPF11718.83.4e-5211
ENSPREP00000022035Beta-CaspPF10996.81.4e-3311
ENSPREP00000022035Lactamase_BPF00753.273.9e-0811
ENSPREP00000022035RMMBLPF07521.121.6e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000022266-1884XM_008397116ENSPREP00000022035627 (aa)XP_008395338-
Gene Model
Click here to download ENSPREG00000014875's gene model file
Pathways
Pathway IDPathway NameSource
pret03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000014875's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPREG00000014875cpsf310074.161ENSPREG00000004482CPSF39079.647
ENSPREG00000014875cpsf36239.691ENSPREG00000021516ints116339.691
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000014875cpsf39982.671ENSG00000119203CPSF39882.075Homo_sapiens
ENSPREG00000014875cpsf37392.779ENSAPOG00000012241CPSF38692.779Acanthochromis_polyacanthus
ENSPREG00000014875cpsf39691.708ENSAPOG00000022087cpsf39991.708Acanthochromis_polyacanthus
ENSPREG00000014875cpsf39982.830ENSAMEG00000008493CPSF39282.830Ailuropoda_melanoleuca
ENSPREG00000014875cpsf310089.399ENSACIG00000009846cpsf310089.399Amphilophus_citrinellus
ENSPREG00000014875cpsf310085.400ENSACIG00000023663CPSF310085.400Amphilophus_citrinellus
ENSPREG00000014875cpsf310084.985ENSAOCG00000022056cpsf39791.200Amphiprion_ocellaris
ENSPREG00000014875cpsf310085.805ENSAOCG00000010077CPSF310085.805Amphiprion_ocellaris
ENSPREG00000014875cpsf310091.228ENSAPEG00000019526cpsf310091.228Amphiprion_percula
ENSPREG00000014875cpsf39985.783ENSAPEG00000021167CPSF39985.783Amphiprion_percula
ENSPREG00000014875cpsf39990.400ENSATEG00000003959cpsf39990.400Anabas_testudineus
ENSPREG00000014875cpsf310075.474ENSATEG00000014525CPSF39081.250Anabas_testudineus
ENSPREG00000014875cpsf39982.194ENSAPLG00000006941CPSF39282.194Anas_platyrhynchos
ENSPREG00000014875cpsf39980.794ENSACAG00000001759CPSF39980.794Anolis_carolinensis
ENSPREG00000014875cpsf39977.516ENSANAG00000031254CPSF39477.516Aotus_nancymaae
ENSPREG00000014875cpsf310085.400ENSACLG00000018846CPSF310085.400Astatotilapia_calliptera
ENSPREG00000014875cpsf310093.142ENSACLG00000014484cpsf310093.142Astatotilapia_calliptera
ENSPREG00000014875cpsf39985.714ENSAMXG00000004786cpsf39985.714Astyanax_mexicanus
ENSPREG00000014875cpsf39982.830ENSBTAG00000019735CPSF39282.830Bos_taurus
ENSPREG00000014875cpsf39156.314WBGene00013460cpsf-38356.314Caenorhabditis_elegans
ENSPREG00000014875cpsf39982.512ENSCJAG00000006276CPSF39282.512Callithrix_jacchus
ENSPREG00000014875cpsf39982.830ENSCAFG00000003375CPSF38782.830Canis_familiaris
ENSPREG00000014875cpsf38985.133ENSCAFG00020026799CPSF39185.133Canis_lupus_dingo
ENSPREG00000014875cpsf39982.830ENSCHIG00000013973CPSF39282.830Capra_hircus
ENSPREG00000014875cpsf39982.671ENSTSYG00000002967CPSF39282.671Carlito_syrichta
ENSPREG00000014875cpsf39982.512ENSCAPG00000013851CPSF39482.512Cavia_aperea
ENSPREG00000014875cpsf39982.353ENSCPOG00000011299CPSF39282.353Cavia_porcellus
ENSPREG00000014875cpsf39982.512ENSCCAG00000036730CPSF39382.512Cebus_capucinus
ENSPREG00000014875cpsf39981.410ENSCATG00000014770CPSF39187.617Cercocebus_atys
ENSPREG00000014875cpsf39982.512ENSCLAG00000002727CPSF39282.512Chinchilla_lanigera
ENSPREG00000014875cpsf39974.245ENSCSAG00000007125CPSF39174.245Chlorocebus_sabaeus
ENSPREG00000014875cpsf38960.633ENSCHOG00000000180CPSF38560.633Choloepus_hoffmanni
ENSPREG00000014875cpsf39976.812ENSCPBG00000014074CPSF39182.671Chrysemys_picta_bellii
ENSPREG00000014875cpsf39966.930ENSCING00000007214-9066.930Ciona_intestinalis
ENSPREG00000014875cpsf39972.170ENSCANG00000034435CPSF39272.170Colobus_angolensis_palliatus
ENSPREG00000014875cpsf39982.353ENSCGRG00001013134Cpsf39282.353Cricetulus_griseus_chok1gshd
ENSPREG00000014875cpsf39982.353ENSCGRG00000018319Cpsf39282.353Cricetulus_griseus_crigri
ENSPREG00000014875cpsf310084.236ENSCSEG00000002021CPSF310084.236Cynoglossus_semilaevis
ENSPREG00000014875cpsf310078.551ENSCVAG00000015067CPSF39184.579Cyprinodon_variegatus
ENSPREG00000014875cpsf310078.696ENSDARG00000027649cpsf39184.579Danio_rerio
ENSPREG00000014875cpsf39981.429ENSDNOG00000008940CPSF38781.429Dasypus_novemcinctus
ENSPREG00000014875cpsf39483.752ENSDORG00000014263Cpsf39183.752Dipodomys_ordii
ENSPREG00000014875cpsf39864.563FBgn0261065Cpsf739064.563Drosophila_melanogaster
ENSPREG00000014875cpsf39573.675ENSETEG00000003893CPSF39273.675Echinops_telfairi
ENSPREG00000014875cpsf39873.011ENSEBUG00000009018cpsf39073.011Eptatretus_burgeri
ENSPREG00000014875cpsf39982.830ENSEASG00005003970CPSF39282.830Equus_asinus_asinus
ENSPREG00000014875cpsf39982.830ENSECAG00000019911CPSF38987.044Equus_caballus
ENSPREG00000014875cpsf39962.958ENSEEUG00000015422CPSF39962.958Erinaceus_europaeus
ENSPREG00000014875cpsf39988.712ENSELUG00000013775cpsf39988.712Esox_lucius
ENSPREG00000014875cpsf39982.830ENSFCAG00000007852CPSF39882.233Felis_catus
ENSPREG00000014875cpsf310081.790ENSFALG00000006572CPSF39881.790Ficedula_albicollis
ENSPREG00000014875cpsf39982.166ENSFDAG00000006317CPSF39182.166Fukomys_damarensis
ENSPREG00000014875cpsf36365.854ENSFHEG00000012186CPSF310065.854Fundulus_heteroclitus
ENSPREG00000014875cpsf310088.047ENSFHEG00000014774cpsf39794.560Fundulus_heteroclitus
ENSPREG00000014875cpsf310081.422ENSGMOG00000003157cpsf39187.420Gadus_morhua
ENSPREG00000014875cpsf39982.222ENSGALG00000016424CPSF39982.222Gallus_gallus
ENSPREG00000014875cpsf310097.774ENSGAFG00000019449cpsf310097.774Gambusia_affinis
ENSPREG00000014875cpsf310079.275ENSGAFG00000008016CPSF39185.215Gambusia_affinis
ENSPREG00000014875cpsf37379.657ENSGAGG00000025583CPSF39379.657Gopherus_agassizii
ENSPREG00000014875cpsf39982.671ENSGGOG00000001757CPSF39982.671Gorilla_gorilla
ENSPREG00000014875cpsf36378.856ENSHBUG00000014332CPSF310078.856Haplochromis_burtoni
ENSPREG00000014875cpsf310093.142ENSHBUG00000001188cpsf310093.142Haplochromis_burtoni
ENSPREG00000014875cpsf39982.166ENSHGLG00000000666CPSF39182.166Heterocephalus_glaber_female
ENSPREG00000014875cpsf39982.166ENSHGLG00100007765CPSF39182.166Heterocephalus_glaber_male
ENSPREG00000014875cpsf39977.649ENSHCOG00000015957CPSF39183.150Hippocampus_comes
ENSPREG00000014875cpsf39982.774ENSHCOG00000007251cpsf39189.263Hippocampus_comes
ENSPREG00000014875cpsf39984.945ENSIPUG00000023488cpsf39985.174Ictalurus_punctatus
ENSPREG00000014875cpsf39982.353ENSSTOG00000004476CPSF39282.353Ictidomys_tridecemlineatus
ENSPREG00000014875cpsf39981.905ENSJJAG00000023415Cpsf39281.905Jaculus_jaculus
ENSPREG00000014875cpsf310085.714ENSKMAG00000002806cpsf39792.160Kryptolebias_marmoratus
ENSPREG00000014875cpsf310078.116ENSKMAG00000007317CPSF39184.102Kryptolebias_marmoratus
ENSPREG00000014875cpsf35987.027ENSLBEG00000015018-9987.027Labrus_bergylta
ENSPREG00000014875cpsf39579.452ENSLBEG00000013492CPSF39085.906Labrus_bergylta
ENSPREG00000014875cpsf39975.700ENSLBEG00000020569cpsf38681.553Labrus_bergylta
ENSPREG00000014875cpsf39970.537ENSLACG00000008308CPSF39175.955Latimeria_chalumnae
ENSPREG00000014875cpsf310078.932ENSLOCG00000016823cpsf39184.652Lepisosteus_oculatus
ENSPREG00000014875cpsf39982.830ENSLAFG00000009467CPSF39282.830Loxodonta_africana
ENSPREG00000014875cpsf39982.512ENSMFAG00000001339CPSF39881.918Macaca_fascicularis
ENSPREG00000014875cpsf39981.918ENSMMUG00000018038CPSF39881.918Macaca_mulatta
ENSPREG00000014875cpsf39961.514ENSMNEG00000039447CPSF39161.514Macaca_nemestrina
ENSPREG00000014875cpsf39982.671ENSMLEG00000026825CPSF38393.095Mandrillus_leucophaeus
ENSPREG00000014875cpsf310085.533ENSMAMG00000003076cpsf310085.533Mastacembelus_armatus
ENSPREG00000014875cpsf310085.782ENSMAMG00000008835CPSF310085.782Mastacembelus_armatus
ENSPREG00000014875cpsf310093.142ENSMZEG00005014358cpsf310093.142Maylandia_zebra
ENSPREG00000014875cpsf310085.400ENSMZEG00005006258CPSF310085.400Maylandia_zebra
ENSPREG00000014875cpsf39982.222ENSMGAG00000013995CPSF39482.222Meleagris_gallopavo
ENSPREG00000014875cpsf35874.933ENSMAUG00000000166Cpsf39974.933Mesocricetus_auratus
ENSPREG00000014875cpsf39977.813ENSMICG00000002363CPSF39877.813Microcebus_murinus
ENSPREG00000014875cpsf39979.680ENSMOCG00000020067Cpsf39179.680Microtus_ochrogaster
ENSPREG00000014875cpsf39984.640ENSMMOG00000018212CPSF39684.640Mola_mola
ENSPREG00000014875cpsf37877.660ENSMMOG00000011923CPSF38577.660Mola_mola
ENSPREG00000014875cpsf39981.132ENSMODG00000014703CPSF39281.132Monodelphis_domestica
ENSPREG00000014875cpsf39683.580ENSMALG00000011474CPSF39683.580Monopterus_albus
ENSPREG00000014875cpsf310089.857ENSMALG00000016416cpsf310089.857Monopterus_albus
ENSPREG00000014875cpsf39982.989MGP_CAROLIEiJ_G0017640Cpsf39282.989Mus_caroli
ENSPREG00000014875cpsf39982.989ENSMUSG00000054309Cpsf39192.760Mus_musculus
ENSPREG00000014875cpsf39982.830MGP_PahariEiJ_G0029397Cpsf39282.830Mus_pahari
ENSPREG00000014875cpsf39982.989MGP_SPRETEiJ_G0018481Cpsf39282.989Mus_spretus
ENSPREG00000014875cpsf39982.643ENSMPUG00000013213CPSF39282.643Mustela_putorius_furo
ENSPREG00000014875cpsf39982.698ENSMLUG00000010636CPSF39282.698Myotis_lucifugus
ENSPREG00000014875cpsf39982.671ENSNGAG00000019836Cpsf39282.671Nannospalax_galili
ENSPREG00000014875cpsf310092.982ENSNBRG00000004770cpsf310092.982Neolamprologus_brichardi
ENSPREG00000014875cpsf310085.400ENSNBRG00000010525CPSF310085.400Neolamprologus_brichardi
ENSPREG00000014875cpsf39982.512ENSNLEG00000013359CPSF39881.918Nomascus_leucogenys
ENSPREG00000014875cpsf39953.145ENSMEUG00000013117-9353.145Notamacropus_eugenii
ENSPREG00000014875cpsf39973.726ENSOPRG00000008902CPSF39273.726Ochotona_princeps
ENSPREG00000014875cpsf39982.671ENSODEG00000003129CPSF39282.671Octodon_degus
ENSPREG00000014875cpsf310084.548ENSONIG00000018812cpsf39790.880Oreochromis_niloticus
ENSPREG00000014875cpsf38882.060ENSOANG00000008577CPSF39982.060Ornithorhynchus_anatinus
ENSPREG00000014875cpsf39982.830ENSOCUG00000003728CPSF39282.830Oryctolagus_cuniculus
ENSPREG00000014875cpsf310083.673ENSORLG00000018854cpsf39190.240Oryzias_latipes
ENSPREG00000014875cpsf310089.633ENSORLG00020013331cpsf310089.633Oryzias_latipes_hni
ENSPREG00000014875cpsf310090.112ENSORLG00015011017cpsf310090.112Oryzias_latipes_hsok
ENSPREG00000014875cpsf310083.819ENSOMEG00000010647cpsf38790.240Oryzias_melastigma
ENSPREG00000014875cpsf39972.019ENSOGAG00000001680CPSF39272.019Otolemur_garnettii
ENSPREG00000014875cpsf39982.830ENSOARG00000015073CPSF39282.830Ovis_aries
ENSPREG00000014875cpsf39982.671ENSPPAG00000042457CPSF39282.671Pan_paniscus
ENSPREG00000014875cpsf39982.353ENSPPRG00000016790CPSF39881.918Panthera_pardus
ENSPREG00000014875cpsf39982.353ENSPTIG00000003920CPSF39982.512Panthera_tigris_altaica
ENSPREG00000014875cpsf39982.671ENSPTRG00000011638CPSF39282.671Pan_troglodytes
ENSPREG00000014875cpsf39982.671ENSPANG00000016798CPSF38490.909Papio_anubis
ENSPREG00000014875cpsf310086.120ENSPKIG00000023646cpsf310086.120Paramormyrops_kingsleyae
ENSPREG00000014875cpsf39982.540ENSPSIG00000016144CPSF39282.540Pelodiscus_sinensis
ENSPREG00000014875cpsf310085.327ENSPMGG00000006141-10085.327Periophthalmus_magnuspinnatus
ENSPREG00000014875cpsf36379.052ENSPMGG00000015311CPSF310079.052Periophthalmus_magnuspinnatus
ENSPREG00000014875cpsf39982.353ENSPEMG00000017668Cpsf39282.512Peromyscus_maniculatus_bairdii
ENSPREG00000014875cpsf37786.570ENSPMAG00000004841cpsf38986.570Petromyzon_marinus
ENSPREG00000014875cpsf39981.604ENSPCIG00000009823CPSF39481.761Phascolarctos_cinereus
ENSPREG00000014875cpsf310090.657ENSPFOG00000015922cpsf39797.276Poecilia_formosa
ENSPREG00000014875cpsf310078.986ENSPFOG00000010418-9185.056Poecilia_formosa
ENSPREG00000014875cpsf36379.753ENSPLAG00000021300-10079.753Poecilia_latipinna
ENSPREG00000014875cpsf310090.657ENSPLAG00000000882cpsf39797.276Poecilia_latipinna
ENSPREG00000014875cpsf310090.803ENSPMEG00000018309cpsf39797.436Poecilia_mexicana
ENSPREG00000014875cpsf39978.060ENSPPYG00000012666CPSF39178.060Pongo_abelii
ENSPREG00000014875cpsf38463.466ENSPCAG00000015042CPSF38163.466Procavia_capensis
ENSPREG00000014875cpsf38779.832ENSPCOG00000023016CPSF39079.832Propithecus_coquereli
ENSPREG00000014875cpsf39982.962ENSPVAG00000005324CPSF39282.962Pteropus_vampyrus
ENSPREG00000014875cpsf310093.142ENSPNYG00000004405cpsf310093.142Pundamilia_nyererei
ENSPREG00000014875cpsf38891.091ENSPNYG00000021047CPSF39291.091Pundamilia_nyererei
ENSPREG00000014875cpsf39986.142ENSPNAG00000023060cpsf39986.142Pygocentrus_nattereri
ENSPREG00000014875cpsf39982.962ENSRNOG00000052418Cpsf39182.962Rattus_norvegicus
ENSPREG00000014875cpsf39978.302ENSRBIG00000041615CPSF39778.302Rhinopithecus_bieti
ENSPREG00000014875cpsf39982.671ENSRROG00000033792CPSF39282.671Rhinopithecus_roxellana
ENSPREG00000014875cpsf39737.274YLR277CYSH19237.274Saccharomyces_cerevisiae
ENSPREG00000014875cpsf39978.696ENSSBOG00000027263CPSF39178.696Saimiri_boliviensis_boliviensis
ENSPREG00000014875cpsf39982.512ENSSHAG00000007024CPSF39282.512Sarcophilus_harrisii
ENSPREG00000014875cpsf310085.827ENSSFOG00015002108cpsf310085.827Scleropages_formosus
ENSPREG00000014875cpsf39579.755ENSSMAG00000020534CPSF38786.464Scophthalmus_maximus
ENSPREG00000014875cpsf310085.669ENSSDUG00000018498CPSF310085.669Seriola_dumerili
ENSPREG00000014875cpsf310083.673ENSSDUG00000002828cpsf38890.080Seriola_dumerili
ENSPREG00000014875cpsf310086.190ENSSLDG00000005234CPSF310086.190Seriola_lalandi_dorsalis
ENSPREG00000014875cpsf310083.673ENSSLDG00000008469cpsf38890.080Seriola_lalandi_dorsalis
ENSPREG00000014875cpsf38979.332ENSSARG00000005186CPSF38279.332Sorex_araneus
ENSPREG00000014875cpsf39981.201ENSSPUG00000015525CPSF39281.201Sphenodon_punctatus
ENSPREG00000014875cpsf310084.402ENSSPAG00000018579cpsf39790.880Stegastes_partitus
ENSPREG00000014875cpsf310086.624ENSSPAG00000002906CPSF310086.624Stegastes_partitus
ENSPREG00000014875cpsf39983.758ENSSSCG00000020799CPSF39983.758Sus_scrofa
ENSPREG00000014875cpsf39982.222ENSTGUG00000013016CPSF39282.222Taeniopygia_guttata
ENSPREG00000014875cpsf39981.287ENSTRUG00000007030cpsf39781.566Takifugu_rubripes
ENSPREG00000014875cpsf36372.431ENSTRUG00000013905CPSF39972.431Takifugu_rubripes
ENSPREG00000014875cpsf38386.174ENSTBEG00000002707CPSF37686.174Tupaia_belangeri
ENSPREG00000014875cpsf38666.757ENSTTRG00000000861CPSF38066.757Tursiops_truncatus
ENSPREG00000014875cpsf39583.694ENSUAMG00000007535CPSF38683.694Ursus_americanus
ENSPREG00000014875cpsf39982.233ENSUMAG00000003676CPSF39882.233Ursus_maritimus
ENSPREG00000014875cpsf39582.285ENSVPAG00000008041CPSF39582.285Vicugna_pacos
ENSPREG00000014875cpsf39982.830ENSVVUG00000002194CPSF39282.830Vulpes_vulpes
ENSPREG00000014875cpsf39975.181ENSXETG00000008263cpsf39081.210Xenopus_tropicalis
ENSPREG00000014875cpsf310089.898ENSXCOG00000019695cpsf39796.624Xiphophorus_couchianus
ENSPREG00000014875cpsf35878.495ENSXCOG00000000957-8778.495Xiphophorus_couchianus
ENSPREG00000014875cpsf310095.411ENSXMAG00000009784cpsf39895.411Xiphophorus_maculatus
ENSPREG00000014875cpsf310079.420ENSXMAG00000027291CPSF39185.374Xiphophorus_maculatus

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