EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000015073 (Gene tree)
Gene ID: 103473819
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 3389 bases
Position: chrLG12:17880719-17884107
Accession: 103473819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000022319	zf-C2H2	PF00096.26	9.3e-13	1	2
ENSPREP00000022319	zf-C2H2	PF00096.26	9.3e-13	2	2
ENSPREP00000022319	zf-met	PF12874.7	8.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000022552	-	1140	XM_008424335	ENSPREP00000022319	379 (aa)	XP_008422557	-

Gene Model

Click here to download ENSPREG00000015073's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000015073's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000015073	prdm12b	69	41.176	ENSPREG00000018366	prdm5	95	41.176
ENSPREG00000015073	prdm12b	95	73.984	ENSPREG00000003211	-	94	73.171

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000015073	prdm12b	89	82.749	ENSG00000130711	PRDM12	100	76.963	Homo_sapiens
ENSPREG00000015073	prdm12b	99	65.195	ENSAPOG00000018234	-	100	64.416	Acanthochromis_polyacanthus
ENSPREG00000015073	prdm12b	99	87.500	ENSAPOG00000016051	prdm12b	100	86.990	Acanthochromis_polyacanthus
ENSPREG00000015073	prdm12b	87	82.424	ENSAMEG00000016234	PRDM12	99	82.727	Ailuropoda_melanoleuca
ENSPREG00000015073	prdm12b	99	76.396	ENSACIG00000005193	-	100	76.650	Amphilophus_citrinellus
ENSPREG00000015073	prdm12b	99	88.052	ENSACIG00000019578	prdm12b	100	87.532	Amphilophus_citrinellus
ENSPREG00000015073	prdm12b	99	88.831	ENSAOCG00000015040	prdm12b	100	88.312	Amphiprion_ocellaris
ENSPREG00000015073	prdm12b	99	89.529	ENSAPEG00000015092	prdm12b	100	89.529	Amphiprion_percula
ENSPREG00000015073	prdm12b	100	73.846	ENSAPEG00000022849	-	100	74.359	Amphiprion_percula
ENSPREG00000015073	prdm12b	99	78.149	ENSATEG00000014595	-	96	83.988	Anabas_testudineus
ENSPREG00000015073	prdm12b	92	81.429	ENSANAG00000020616	PRDM12	97	83.186	Aotus_nancymaae
ENSPREG00000015073	prdm12b	99	86.053	ENSACLG00000011876	prdm12b	100	84.737	Astatotilapia_calliptera
ENSPREG00000015073	prdm12b	99	76.826	ENSACLG00000007631	-	100	75.758	Astatotilapia_calliptera
ENSPREG00000015073	prdm12b	99	81.316	ENSAMXG00000033665	prdm12b	100	80.840	Astyanax_mexicanus
ENSPREG00000015073	prdm12b	99	80.475	ENSAMXG00000008540	PRDM12	100	79.894	Astyanax_mexicanus
ENSPREG00000015073	prdm12b	89	82.456	ENSBTAG00000023797	PRDM12	91	82.891	Bos_taurus
ENSPREG00000015073	prdm12b	89	82.749	ENSCJAG00000020540	PRDM12	91	82.891	Callithrix_jacchus
ENSPREG00000015073	prdm12b	78	83.278	ENSCAFG00000023076	PRDM12	99	76.991	Canis_familiaris
ENSPREG00000015073	prdm12b	89	82.749	ENSCAFG00020024046	PRDM12	100	77.225	Canis_lupus_dingo
ENSPREG00000015073	prdm12b	89	82.749	ENSCHIG00000025005	PRDM12	91	83.186	Capra_hircus
ENSPREG00000015073	prdm12b	93	77.746	ENSCPOG00000005901	PRDM12	95	82.972	Cavia_porcellus
ENSPREG00000015073	prdm12b	89	82.749	ENSCCAG00000037485	PRDM12	91	82.891	Cebus_capucinus
ENSPREG00000015073	prdm12b	89	82.749	ENSCATG00000020327	PRDM12	91	82.891	Cercocebus_atys
ENSPREG00000015073	prdm12b	89	82.596	ENSCLAG00000005499	PRDM12	90	82.596	Chinchilla_lanigera
ENSPREG00000015073	prdm12b	89	82.749	ENSCSAG00000014756	PRDM12	100	76.963	Chlorocebus_sabaeus
ENSPREG00000015073	prdm12b	100	78.796	ENSCPBG00000022628	PRDM12	100	77.225	Chrysemys_picta_bellii
ENSPREG00000015073	prdm12b	89	82.456	ENSCGRG00001015005	Prdm12	100	76.963	Cricetulus_griseus_chok1gshd
ENSPREG00000015073	prdm12b	99	93.701	ENSCVAG00000017166	prdm12b	100	93.701	Cyprinodon_variegatus
ENSPREG00000015073	prdm12b	99	77.411	ENSCVAG00000000944	-	100	77.411	Cyprinodon_variegatus
ENSPREG00000015073	prdm12b	99	82.058	ENSDARG00000007430	prdm12b	100	81.794	Danio_rerio
ENSPREG00000015073	prdm12b	89	82.164	ENSDNOG00000042302	PRDM12	91	82.596	Dasypus_novemcinctus
ENSPREG00000015073	prdm12b	93	62.400	ENSEBUG00000016780	prdm12b	74	68.155	Eptatretus_burgeri
ENSPREG00000015073	prdm12b	89	83.186	ENSEASG00005008472	PRDM12	91	83.186	Equus_asinus_asinus
ENSPREG00000015073	prdm12b	89	83.186	ENSECAG00000005933	PRDM12	91	83.186	Equus_caballus
ENSPREG00000015073	prdm12b	99	80.418	ENSELUG00000009905	prdm12b	100	80.315	Esox_lucius
ENSPREG00000015073	prdm12b	99	79.894	ENSELUG00000013674	PRDM12	100	81.137	Esox_lucius
ENSPREG00000015073	prdm12b	89	82.749	ENSFCAG00000043086	PRDM12	91	83.186	Felis_catus
ENSPREG00000015073	prdm12b	100	79.581	ENSFALG00000001445	PRDM12	89	78.010	Ficedula_albicollis
ENSPREG00000015073	prdm12b	99	92.969	ENSFHEG00000003944	prdm12b	100	91.667	Fundulus_heteroclitus
ENSPREG00000015073	prdm12b	99	76.845	ENSFHEG00000007746	-	100	76.845	Fundulus_heteroclitus
ENSPREG00000015073	prdm12b	91	86.040	ENSGMOG00000011797	prdm12b	100	81.890	Gadus_morhua
ENSPREG00000015073	prdm12b	100	79.581	ENSGALG00000003895	PRDM12	100	78.010	Gallus_gallus
ENSPREG00000015073	prdm12b	100	97.625	ENSGAFG00000010827	prdm12b	100	97.625	Gambusia_affinis
ENSPREG00000015073	prdm12b	100	87.760	ENSGACG00000016713	prdm12b	100	86.979	Gasterosteus_aculeatus
ENSPREG00000015073	prdm12b	100	78.796	ENSGAGG00000014083	PRDM12	100	77.225	Gopherus_agassizii
ENSPREG00000015073	prdm12b	89	82.456	ENSGGOG00000010568	PRDM12	100	76.702	Gorilla_gorilla
ENSPREG00000015073	prdm12b	99	87.467	ENSHBUG00000022878	prdm12b	100	87.990	Haplochromis_burtoni
ENSPREG00000015073	prdm12b	99	76.826	ENSHBUG00000022537	-	93	75.567	Haplochromis_burtoni
ENSPREG00000015073	prdm12b	89	82.891	ENSHGLG00000013939	PRDM12	100	76.440	Heterocephalus_glaber_female
ENSPREG00000015073	prdm12b	87	85.714	ENSHCOG00000003663	prdm12b	100	80.000	Hippocampus_comes
ENSPREG00000015073	prdm12b	95	74.105	ENSHCOG00000021167	-	100	70.361	Hippocampus_comes
ENSPREG00000015073	prdm12b	99	77.632	ENSIPUG00000019544	PRDM12	100	77.632	Ictalurus_punctatus
ENSPREG00000015073	prdm12b	99	82.368	ENSIPUG00000017053	prdm12b	100	81.890	Ictalurus_punctatus
ENSPREG00000015073	prdm12b	89	82.749	ENSSTOG00000005986	PRDM12	86	83.186	Ictidomys_tridecemlineatus
ENSPREG00000015073	prdm12b	89	83.186	ENSJJAG00000005424	Prdm12	99	83.186	Jaculus_jaculus
ENSPREG00000015073	prdm12b	94	77.222	ENSKMAG00000021205	-	93	76.944	Kryptolebias_marmoratus
ENSPREG00000015073	prdm12b	99	82.673	ENSKMAG00000016921	prdm12b	100	84.653	Kryptolebias_marmoratus
ENSPREG00000015073	prdm12b	99	88.512	ENSLBEG00000017769	prdm12b	100	87.467	Labrus_bergylta
ENSPREG00000015073	prdm12b	99	77.604	ENSLBEG00000007776	-	100	77.865	Labrus_bergylta
ENSPREG00000015073	prdm12b	99	78.947	ENSLACG00000017560	PRDM12	99	77.368	Latimeria_chalumnae
ENSPREG00000015073	prdm12b	99	79.790	ENSLOCG00000005429	prdm12b	99	80.315	Lepisosteus_oculatus
ENSPREG00000015073	prdm12b	89	83.186	ENSLAFG00000006979	PRDM12	90	83.631	Loxodonta_africana
ENSPREG00000015073	prdm12b	89	82.456	ENSMFAG00000040322	PRDM12	90	82.891	Macaca_fascicularis
ENSPREG00000015073	prdm12b	89	82.749	ENSMNEG00000037234	PRDM12	91	82.891	Macaca_nemestrina
ENSPREG00000015073	prdm12b	99	74.684	ENSMAMG00000018988	-	100	75.190	Mastacembelus_armatus
ENSPREG00000015073	prdm12b	99	86.719	ENSMAMG00000013212	prdm12b	100	87.240	Mastacembelus_armatus
ENSPREG00000015073	prdm12b	99	76.441	ENSMZEG00005000415	PRDM12	100	75.126	Maylandia_zebra
ENSPREG00000015073	prdm12b	93	82.353	ENSMGAG00000005438	PRDM12	92	85.970	Meleagris_gallopavo
ENSPREG00000015073	prdm12b	100	77.225	ENSMAUG00000013040	Prdm12	100	76.702	Mesocricetus_auratus
ENSPREG00000015073	prdm12b	89	82.749	ENSMICG00000015480	PRDM12	91	83.186	Microcebus_murinus
ENSPREG00000015073	prdm12b	99	77.454	ENSMOCG00000021026	Prdm12	90	83.186	Microtus_ochrogaster
ENSPREG00000015073	prdm12b	100	78.272	ENSMODG00000012108	PRDM12	92	84.776	Monodelphis_domestica
ENSPREG00000015073	prdm12b	99	73.107	ENSMALG00000021901	prdm12b	99	72.966	Monopterus_albus
ENSPREG00000015073	prdm12b	89	82.456	MGP_CAROLIEiJ_G0023414	Prdm12	100	76.963	Mus_caroli
ENSPREG00000015073	prdm12b	89	82.456	ENSMUSG00000079466	Prdm12	100	76.963	Mus_musculus
ENSPREG00000015073	prdm12b	89	82.456	MGP_PahariEiJ_G0024871	Prdm12	100	76.963	Mus_pahari
ENSPREG00000015073	prdm12b	89	82.456	MGP_SPRETEiJ_G0024331	Prdm12	100	76.963	Mus_spretus
ENSPREG00000015073	prdm12b	88	83.582	ENSNGAG00000018480	Prdm12	93	82.891	Nannospalax_galili
ENSPREG00000015073	prdm12b	99	71.907	ENSNBRG00000024312	-	100	71.907	Neolamprologus_brichardi
ENSPREG00000015073	prdm12b	99	87.047	ENSNBRG00000006727	prdm12b	100	86.788	Neolamprologus_brichardi
ENSPREG00000015073	prdm12b	100	70.185	ENSMEUG00000003828	PRDM12	92	75.602	Notamacropus_eugenii
ENSPREG00000015073	prdm12b	89	83.186	ENSOPRG00000008680	PRDM12	99	83.186	Ochotona_princeps
ENSPREG00000015073	prdm12b	92	81.429	ENSODEG00000016282	PRDM12	62	82.891	Octodon_degus
ENSPREG00000015073	prdm12b	64	75.207	ENSOANG00000001043	PRDM12	100	73.140	Ornithorhynchus_anatinus
ENSPREG00000015073	prdm12b	81	83.495	ENSOCUG00000008241	PRDM12	96	83.495	Oryctolagus_cuniculus
ENSPREG00000015073	prdm12b	99	77.692	ENSORLG00000017558	-	100	77.436	Oryzias_latipes
ENSPREG00000015073	prdm12b	100	84.872	ENSORLG00000007114	prdm12b	100	84.062	Oryzias_latipes
ENSPREG00000015073	prdm12b	100	84.833	ENSORLG00020019565	prdm12b	100	84.576	Oryzias_latipes_hni
ENSPREG00000015073	prdm12b	99	77.238	ENSORLG00020013167	-	100	77.238	Oryzias_latipes_hni
ENSPREG00000015073	prdm12b	100	83.805	ENSORLG00015007621	prdm12b	100	84.062	Oryzias_latipes_hsok
ENSPREG00000015073	prdm12b	99	77.692	ENSORLG00015003435	-	100	77.436	Oryzias_latipes_hsok
ENSPREG00000015073	prdm12b	99	76.263	ENSOMEG00000007762	-	100	76.263	Oryzias_melastigma
ENSPREG00000015073	prdm12b	100	84.224	ENSOMEG00000004134	prdm12b	100	84.184	Oryzias_melastigma
ENSPREG00000015073	prdm12b	89	82.749	ENSOGAG00000007557	PRDM12	99	83.186	Otolemur_garnettii
ENSPREG00000015073	prdm12b	78	81.818	ENSPPAG00000031506	-	99	80.528	Pan_paniscus
ENSPREG00000015073	prdm12b	100	71.316	ENSPPRG00000023024	PRDM12	84	77.151	Panthera_pardus
ENSPREG00000015073	prdm12b	89	82.749	ENSPTRG00000021475	PRDM12	100	76.963	Pan_troglodytes
ENSPREG00000015073	prdm12b	89	82.749	ENSPTRG00000043324	-	100	76.963	Pan_troglodytes
ENSPREG00000015073	prdm12b	89	82.749	ENSPANG00000025967	PRDM12	91	82.891	Papio_anubis
ENSPREG00000015073	prdm12b	92	78.857	ENSPKIG00000004305	PRDM12	94	81.627	Paramormyrops_kingsleyae
ENSPREG00000015073	prdm12b	99	82.199	ENSPKIG00000007228	prdm12b	100	82.199	Paramormyrops_kingsleyae
ENSPREG00000015073	prdm12b	100	78.534	ENSPSIG00000006739	PRDM12	100	76.963	Pelodiscus_sinensis
ENSPREG00000015073	prdm12b	99	75.448	ENSPMGG00000002356	-	100	74.359	Periophthalmus_magnuspinnatus
ENSPREG00000015073	prdm12b	100	85.789	ENSPMGG00000008867	prdm12b	100	87.105	Periophthalmus_magnuspinnatus
ENSPREG00000015073	prdm12b	96	79.019	ENSPEMG00000009969	Prdm12	90	82.891	Peromyscus_maniculatus_bairdii
ENSPREG00000015073	prdm12b	100	78.272	ENSPCIG00000024119	PRDM12	92	84.776	Phascolarctos_cinereus
ENSPREG00000015073	prdm12b	99	94.256	ENSPFOG00000019841	prdm12b	100	94.256	Poecilia_formosa
ENSPREG00000015073	prdm12b	100	98.945	ENSPLAG00000016626	prdm12b	100	98.945	Poecilia_latipinna
ENSPREG00000015073	prdm12b	96	99.178	ENSPMEG00000016698	prdm12b	99	99.178	Poecilia_mexicana
ENSPREG00000015073	prdm12b	96	79.235	ENSPPYG00000019694	PRDM12	93	83.881	Pongo_abelii
ENSPREG00000015073	prdm12b	89	82.749	ENSPCOG00000022255	PRDM12	100	77.225	Propithecus_coquereli
ENSPREG00000015073	prdm12b	89	82.749	ENSPVAG00000001511	PRDM12	100	77.225	Pteropus_vampyrus
ENSPREG00000015073	prdm12b	99	76.441	ENSPNYG00000013589	-	100	75.126	Pundamilia_nyererei
ENSPREG00000015073	prdm12b	99	87.273	ENSPNYG00000009607	prdm12b	100	86.753	Pundamilia_nyererei
ENSPREG00000015073	prdm12b	99	79.112	ENSPNAG00000013396	PRDM12	100	78.851	Pygocentrus_nattereri
ENSPREG00000015073	prdm12b	99	82.632	ENSPNAG00000024532	prdm12b	100	81.842	Pygocentrus_nattereri
ENSPREG00000015073	prdm12b	89	82.456	ENSRNOG00000009218	Prdm12	100	76.963	Rattus_norvegicus
ENSPREG00000015073	prdm12b	85	83.792	ENSRBIG00000042712	PRDM12	91	81.471	Rhinopithecus_bieti
ENSPREG00000015073	prdm12b	87	83.988	ENSRROG00000043554	PRDM12	100	83.988	Rhinopithecus_roxellana
ENSPREG00000015073	prdm12b	100	77.546	ENSSHAG00000015972	PRDM12	92	83.929	Sarcophilus_harrisii
ENSPREG00000015073	prdm12b	99	85.279	ENSSMAG00000003754	prdm12b	100	86.041	Scophthalmus_maximus
ENSPREG00000015073	prdm12b	99	86.224	ENSSDUG00000023498	prdm12b	100	85.714	Seriola_dumerili
ENSPREG00000015073	prdm12b	99	78.093	ENSSDUG00000019071	-	100	77.835	Seriola_dumerili
ENSPREG00000015073	prdm12b	99	85.459	ENSSLDG00000009557	prdm12b	100	85.459	Seriola_lalandi_dorsalis
ENSPREG00000015073	prdm12b	99	76.517	ENSSLDG00000013562	-	100	76.253	Seriola_lalandi_dorsalis
ENSPREG00000015073	prdm12b	100	77.428	ENSSPUG00000013424	PRDM12	100	76.115	Sphenodon_punctatus
ENSPREG00000015073	prdm12b	99	87.824	ENSSPAG00000018824	prdm12b	100	88.083	Stegastes_partitus
ENSPREG00000015073	prdm12b	99	72.559	ENSSPAG00000022420	-	100	72.559	Stegastes_partitus
ENSPREG00000015073	prdm12b	89	82.749	ENSSSCG00000005703	PRDM12	100	77.225	Sus_scrofa
ENSPREG00000015073	prdm12b	99	86.842	ENSTRUG00000018659	prdm12b	100	85.602	Takifugu_rubripes
ENSPREG00000015073	prdm12b	99	75.521	ENSTRUG00000013239	-	100	75.521	Takifugu_rubripes
ENSPREG00000015073	prdm12b	99	86.842	ENSTNIG00000009020	prdm12b	99	85.340	Tetraodon_nigroviridis
ENSPREG00000015073	prdm12b	99	74.674	ENSTNIG00000005859	-	100	73.958	Tetraodon_nigroviridis
ENSPREG00000015073	prdm12b	89	82.749	ENSUAMG00000009653	PRDM12	91	83.186	Ursus_americanus
ENSPREG00000015073	prdm12b	89	82.749	ENSVVUG00000027662	PRDM12	78	83.186	Vulpes_vulpes
ENSPREG00000015073	prdm12b	100	97.098	ENSXCOG00000002836	prdm12b	100	97.098	Xiphophorus_couchianus
ENSPREG00000015073	prdm12b	99	96.325	ENSXMAG00000005537	prdm12b	100	96.325	Xiphophorus_maculatus
ENSPREG00000015073	prdm12b	99	75.500	ENSXMAG00000028012	-	100	75.500	Xiphophorus_maculatus