EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000015142 (Gene tree)
Gene ID: 103473196
Gene Symbol: ddx56
Alias: noh61|zgc:110078
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 8633 bases
Position: chrLG12:2541463-2550095
Accession: 103473196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000022459	ResIII	PF04851.15	5.5e-09	1	1
ENSPREP00000022478	ResIII	PF04851.15	5.9e-09	1	1
ENSPREP00000022450	ResIII	PF04851.15	6.9e-09	1	1
ENSPREP00000022450	DEAD	PF00270.29	1.6e-39	1	1
ENSPREP00000022459	DEAD	PF00270.29	1.8e-39	1	1
ENSPREP00000022478	DEAD	PF00270.29	1.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000022695	-	1677	XM_008423223	ENSPREP00000022459	558 (aa)	XP_008421445	UPI0004A3BA84
ENSPRET00000022686	-	1620	-	ENSPREP00000022450	539 (aa)	-	-
ENSPRET00000022716	-	1698	-	ENSPREP00000022478	565 (aa)	-	-

Gene Model

Click here to download ENSPREG00000015142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000015142's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000015142	ddx56	68	30.130	ENSPREG00000016644	ddx55	61	30.130
ENSPREG00000015142	ddx56	75	30.318	ENSPREG00000011214	ddx49	78	30.318
ENSPREG00000015142	ddx56	70	30.402	ENSPREG00000002899	ddx28	65	30.402
ENSPREG00000015142	ddx56	74	30.151	ENSPREG00000016082	ddx6	76	30.151
ENSPREG00000015142	ddx56	78	32.143	ENSPREG00000015560	ddx47	80	31.429
ENSPREG00000015142	ddx56	70	31.250	ENSPREG00000016874	ddx52	56	31.328
ENSPREG00000015142	ddx56	72	30.102	ENSPREG00000003519	eif4a1b	91	30.102

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000015142	ddx56	97	64.498	ENSG00000136271	DDX56	99	66.935	Homo_sapiens
ENSPREG00000015142	ddx56	100	85.740	ENSAPOG00000017113	ddx56	100	85.740	Acanthochromis_polyacanthus
ENSPREG00000015142	ddx56	97	63.636	ENSAMEG00000017711	DDX56	97	63.822	Ailuropoda_melanoleuca
ENSPREG00000015142	ddx56	95	73.872	ENSACIG00000013747	ddx56	99	89.071	Amphilophus_citrinellus
ENSPREG00000015142	ddx56	87	88.115	ENSAOCG00000015447	-	87	88.090	Amphiprion_ocellaris
ENSPREG00000015142	ddx56	91	85.968	ENSAOCG00000018059	ddx56	94	87.800	Amphiprion_ocellaris
ENSPREG00000015142	ddx56	100	85.125	ENSAPEG00000007267	ddx56	100	85.125	Amphiprion_percula
ENSPREG00000015142	ddx56	99	82.975	ENSATEG00000005279	ddx56	99	82.975	Anabas_testudineus
ENSPREG00000015142	ddx56	100	82.857	ENSACLG00000020113	ddx56	100	82.857	Astatotilapia_calliptera
ENSPREG00000015142	ddx56	99	75.045	ENSAMXG00000019357	ddx56	99	75.583	Astyanax_mexicanus
ENSPREG00000015142	ddx56	97	64.652	ENSBTAG00000010602	DDX56	97	64.925	Bos_taurus
ENSPREG00000015142	ddx56	97	39.964	WBGene00016073	C24H12.4	86	39.785	Caenorhabditis_elegans
ENSPREG00000015142	ddx56	97	64.684	ENSCJAG00000012233	DDX56	99	64.000	Callithrix_jacchus
ENSPREG00000015142	ddx56	80	62.273	ENSCAFG00000029295	DDX56	98	62.500	Canis_familiaris
ENSPREG00000015142	ddx56	97	63.910	ENSCAFG00020019695	DDX56	97	63.910	Canis_lupus_dingo
ENSPREG00000015142	ddx56	98	64.022	ENSCHIG00000014261	DDX56	98	64.022	Capra_hircus
ENSPREG00000015142	ddx56	97	64.286	ENSTSYG00000008048	DDX56	97	64.469	Carlito_syrichta
ENSPREG00000015142	ddx56	85	64.059	ENSCAPG00000006286	DDX56	99	63.270	Cavia_aperea
ENSPREG00000015142	ddx56	98	64.890	ENSCPOG00000003359	DDX56	99	64.890	Cavia_porcellus
ENSPREG00000015142	ddx56	99	63.818	ENSCCAG00000025303	DDX56	99	63.818	Cebus_capucinus
ENSPREG00000015142	ddx56	97	64.246	ENSCATG00000039389	DDX56	97	64.246	Cercocebus_atys
ENSPREG00000015142	ddx56	99	64.416	ENSCLAG00000007666	DDX56	99	64.416	Chinchilla_lanigera
ENSPREG00000015142	ddx56	97	64.126	ENSCSAG00000015636	DDX56	97	64.126	Chlorocebus_sabaeus
ENSPREG00000015142	ddx56	99	69.369	ENSCPBG00000024556	DDX56	99	69.189	Chrysemys_picta_bellii
ENSPREG00000015142	ddx56	90	60.630	ENSCING00000005185	-	98	60.630	Ciona_intestinalis
ENSPREG00000015142	ddx56	90	60.721	ENSCSAVG00000011266	-	99	61.200	Ciona_savignyi
ENSPREG00000015142	ddx56	97	64.126	ENSCANG00000028187	DDX56	97	64.126	Colobus_angolensis_palliatus
ENSPREG00000015142	ddx56	97	65.934	ENSCGRG00001019019	Ddx56	97	65.056	Cricetulus_griseus_chok1gshd
ENSPREG00000015142	ddx56	97	65.934	ENSCGRG00000011870	Ddx56	97	65.056	Cricetulus_griseus_crigri
ENSPREG00000015142	ddx56	100	81.462	ENSCSEG00000008368	ddx56	100	81.462	Cynoglossus_semilaevis
ENSPREG00000015142	ddx56	100	92.294	ENSCVAG00000006499	ddx56	100	92.294	Cyprinodon_variegatus
ENSPREG00000015142	ddx56	99	80.396	ENSDARG00000020913	ddx56	99	80.576	Danio_rerio
ENSPREG00000015142	ddx56	85	63.425	ENSDNOG00000036526	DDX56	96	63.283	Dasypus_novemcinctus
ENSPREG00000015142	ddx56	97	50.091	FBgn0001565	Hlc	96	50.091	Drosophila_melanogaster
ENSPREG00000015142	ddx56	59	83.333	ENSETEG00000002969	-	61	83.333	Echinops_telfairi
ENSPREG00000015142	ddx56	86	43.830	ENSETEG00000019559	-	100	43.830	Echinops_telfairi
ENSPREG00000015142	ddx56	97	66.727	ENSEBUG00000009986	ddx56	98	67.091	Eptatretus_burgeri
ENSPREG00000015142	ddx56	97	64.060	ENSEASG00005017795	DDX56	97	64.060	Equus_asinus_asinus
ENSPREG00000015142	ddx56	97	63.873	ENSECAG00000019897	DDX56	97	63.873	Equus_caballus
ENSPREG00000015142	ddx56	85	62.420	ENSEEUG00000004849	DDX56	98	62.815	Erinaceus_europaeus
ENSPREG00000015142	ddx56	100	81.362	ENSELUG00000004150	ddx56	100	81.183	Esox_lucius
ENSPREG00000015142	ddx56	97	63.738	ENSFCAG00000010261	DDX56	97	63.925	Felis_catus
ENSPREG00000015142	ddx56	99	63.787	ENSFDAG00000007128	DDX56	98	63.971	Fukomys_damarensis
ENSPREG00000015142	ddx56	100	87.636	ENSFHEG00000018008	ddx56	97	91.897	Fundulus_heteroclitus
ENSPREG00000015142	ddx56	100	86.131	ENSGAFG00000006906	ddx56	100	86.496	Gambusia_affinis
ENSPREG00000015142	ddx56	91	72.515	ENSGAGG00000006789	DDX56	89	73.069	Gopherus_agassizii
ENSPREG00000015142	ddx56	97	64.498	ENSGGOG00000012031	DDX56	97	64.498	Gorilla_gorilla
ENSPREG00000015142	ddx56	95	78.987	ENSHBUG00000015246	ddx56	96	78.987	Haplochromis_burtoni
ENSPREG00000015142	ddx56	99	63.273	ENSHGLG00000017271	DDX56	99	63.273	Heterocephalus_glaber_female
ENSPREG00000015142	ddx56	99	63.273	ENSHGLG00100015731	DDX56	99	63.273	Heterocephalus_glaber_male
ENSPREG00000015142	ddx56	99	81.982	ENSHCOG00000001685	ddx56	99	81.802	Hippocampus_comes
ENSPREG00000015142	ddx56	99	75.045	ENSIPUG00000006602	ddx56	98	76.302	Ictalurus_punctatus
ENSPREG00000015142	ddx56	97	65.112	ENSSTOG00000000464	DDX56	97	65.112	Ictidomys_tridecemlineatus
ENSPREG00000015142	ddx56	97	64.835	ENSJJAG00000014269	Ddx56	98	64.739	Jaculus_jaculus
ENSPREG00000015142	ddx56	100	87.034	ENSKMAG00000016611	ddx56	99	87.034	Kryptolebias_marmoratus
ENSPREG00000015142	ddx56	99	83.542	ENSLBEG00000026281	ddx56	100	83.542	Labrus_bergylta
ENSPREG00000015142	ddx56	98	72.051	ENSLACG00000015551	DDX56	97	72.101	Latimeria_chalumnae
ENSPREG00000015142	ddx56	99	78.417	ENSLOCG00000015185	ddx56	98	78.597	Lepisosteus_oculatus
ENSPREG00000015142	ddx56	98	64.973	ENSLAFG00000018206	DDX56	98	64.610	Loxodonta_africana
ENSPREG00000015142	ddx56	97	64.432	ENSMFAG00000041001	DDX56	97	64.432	Macaca_fascicularis
ENSPREG00000015142	ddx56	97	64.432	ENSMMUG00000002645	DDX56	97	64.432	Macaca_mulatta
ENSPREG00000015142	ddx56	97	64.432	ENSMNEG00000028492	DDX56	97	64.432	Macaca_nemestrina
ENSPREG00000015142	ddx56	97	64.432	ENSMLEG00000043591	DDX56	97	64.432	Mandrillus_leucophaeus
ENSPREG00000015142	ddx56	100	82.143	ENSMAMG00000007776	ddx56	99	82.616	Mastacembelus_armatus
ENSPREG00000015142	ddx56	100	82.857	ENSMZEG00005009813	ddx56	100	82.857	Maylandia_zebra
ENSPREG00000015142	ddx56	98	64.154	ENSMICG00000005550	DDX56	99	64.154	Microcebus_murinus
ENSPREG00000015142	ddx56	97	64.103	ENSMOCG00000016782	Ddx56	97	63.822	Microtus_ochrogaster
ENSPREG00000015142	ddx56	91	85.288	ENSMMOG00000009654	ddx56	95	86.653	Mola_mola
ENSPREG00000015142	ddx56	98	60.799	ENSMODG00000016137	DDX56	97	60.254	Monodelphis_domestica
ENSPREG00000015142	ddx56	68	80.376	ENSMALG00000016910	ddx56	100	80.376	Monopterus_albus
ENSPREG00000015142	ddx56	99	63.291	MGP_CAROLIEiJ_G0016069	Ddx56	98	67.339	Mus_caroli
ENSPREG00000015142	ddx56	99	63.472	ENSMUSG00000004393	Ddx56	98	67.742	Mus_musculus
ENSPREG00000015142	ddx56	97	64.366	MGP_PahariEiJ_G0016822	Ddx56	98	67.339	Mus_pahari
ENSPREG00000015142	ddx56	99	63.472	MGP_SPRETEiJ_G0016911	Ddx56	98	67.742	Mus_spretus
ENSPREG00000015142	ddx56	97	63.254	ENSMPUG00000018196	DDX56	86	63.197	Mustela_putorius_furo
ENSPREG00000015142	ddx56	97	64.112	ENSMLUG00000003509	DDX56	97	64.112	Myotis_lucifugus
ENSPREG00000015142	ddx56	99	65.461	ENSNGAG00000018785	Ddx56	99	65.378	Nannospalax_galili
ENSPREG00000015142	ddx56	99	77.486	ENSNBRG00000002656	ddx56	96	79.661	Neolamprologus_brichardi
ENSPREG00000015142	ddx56	98	65.009	ENSNLEG00000003816	DDX56	98	65.009	Nomascus_leucogenys
ENSPREG00000015142	ddx56	90	61.694	ENSMEUG00000006788	DDX56	99	61.694	Notamacropus_eugenii
ENSPREG00000015142	ddx56	98	63.636	ENSOPRG00000000292	-	98	63.636	Ochotona_princeps
ENSPREG00000015142	ddx56	68	67.925	ENSODEG00000014807	DDX56	99	67.925	Octodon_degus
ENSPREG00000015142	ddx56	100	80.645	ENSONIG00000011509	ddx56	99	80.734	Oreochromis_niloticus
ENSPREG00000015142	ddx56	96	57.328	ENSOANG00000006320	-	99	57.471	Ornithorhynchus_anatinus
ENSPREG00000015142	ddx56	73	58.794	ENSOANG00000015987	-	94	58.794	Ornithorhynchus_anatinus
ENSPREG00000015142	ddx56	98	64.457	ENSOCUG00000022918	DDX56	98	64.457	Oryctolagus_cuniculus
ENSPREG00000015142	ddx56	100	85.125	ENSORLG00000001434	ddx56	100	85.125	Oryzias_latipes
ENSPREG00000015142	ddx56	100	84.946	ENSORLG00020015718	ddx56	97	84.946	Oryzias_latipes_hni
ENSPREG00000015142	ddx56	99	85.099	ENSORLG00015003004	ddx56	96	85.099	Oryzias_latipes_hsok
ENSPREG00000015142	ddx56	100	85.305	ENSOMEG00000022072	ddx56	99	85.305	Oryzias_melastigma
ENSPREG00000015142	ddx56	97	64.804	ENSOGAG00000009981	DDX56	97	65.177	Otolemur_garnettii
ENSPREG00000015142	ddx56	97	65.201	ENSOARG00000015240	DDX56	97	64.552	Ovis_aries
ENSPREG00000015142	ddx56	99	53.188	ENSPPAG00000031263	-	99	53.188	Pan_paniscus
ENSPREG00000015142	ddx56	97	61.792	ENSPPAG00000029147	DDX56	97	61.792	Pan_paniscus
ENSPREG00000015142	ddx56	97	63.736	ENSPPRG00000014594	DDX56	97	63.704	Panthera_pardus
ENSPREG00000015142	ddx56	94	56.522	ENSPTIG00000019500	DDX56	97	56.622	Panthera_tigris_altaica
ENSPREG00000015142	ddx56	97	64.498	ENSPTRG00000019147	DDX56	97	64.498	Pan_troglodytes
ENSPREG00000015142	ddx56	94	52.783	ENSPTRG00000052765	-	99	54.127	Pan_troglodytes
ENSPREG00000015142	ddx56	97	64.060	ENSPANG00000002446	DDX56	97	64.060	Papio_anubis
ENSPREG00000015142	ddx56	100	76.882	ENSPKIG00000018998	ddx56	99	76.882	Paramormyrops_kingsleyae
ENSPREG00000015142	ddx56	95	83.992	ENSPMGG00000017421	ddx56	99	83.992	Periophthalmus_magnuspinnatus
ENSPREG00000015142	ddx56	98	66.667	ENSPCIG00000009336	DDX56	97	66.120	Phascolarctos_cinereus
ENSPREG00000015142	ddx56	100	97.670	ENSPFOG00000018658	ddx56	100	97.670	Poecilia_formosa
ENSPREG00000015142	ddx56	100	97.849	ENSPLAG00000019208	ddx56	100	97.849	Poecilia_latipinna
ENSPREG00000015142	ddx56	100	97.849	ENSPMEG00000001775	ddx56	100	97.849	Poecilia_mexicana
ENSPREG00000015142	ddx56	97	64.498	ENSPPYG00000017591	DDX56	97	64.498	Pongo_abelii
ENSPREG00000015142	ddx56	97	64.338	ENSPCAG00000011499	DDX56	99	63.787	Procavia_capensis
ENSPREG00000015142	ddx56	97	64.964	ENSPCOG00000024864	DDX56	97	64.804	Propithecus_coquereli
ENSPREG00000015142	ddx56	86	69.194	ENSPVAG00000000791	DDX56	85	69.194	Pteropus_vampyrus
ENSPREG00000015142	ddx56	100	82.679	ENSPNYG00000019212	ddx56	100	82.679	Pundamilia_nyererei
ENSPREG00000015142	ddx56	99	78.597	ENSPNAG00000025446	ddx56	99	78.479	Pygocentrus_nattereri
ENSPREG00000015142	ddx56	97	64.739	ENSRNOG00000004670	Ddx56	97	64.739	Rattus_norvegicus
ENSPREG00000015142	ddx56	97	64.312	ENSRBIG00000030140	DDX56	97	64.312	Rhinopithecus_bieti
ENSPREG00000015142	ddx56	97	64.126	ENSRROG00000044428	DDX56	97	64.126	Rhinopithecus_roxellana
ENSPREG00000015142	ddx56	89	46.097	YLR276C	-	90	46.555	Saccharomyces_cerevisiae
ENSPREG00000015142	ddx56	97	64.312	ENSSBOG00000034339	DDX56	99	63.636	Saimiri_boliviensis_boliviensis
ENSPREG00000015142	ddx56	85	66.042	ENSSHAG00000016615	DDX56	98	65.481	Sarcophilus_harrisii
ENSPREG00000015142	ddx56	100	76.964	ENSSFOG00015012795	ddx56	100	76.964	Scleropages_formosus
ENSPREG00000015142	ddx56	100	82.948	ENSSMAG00000011280	ddx56	99	84.888	Scophthalmus_maximus
ENSPREG00000015142	ddx56	100	84.342	ENSSDUG00000023597	ddx56	100	84.342	Seriola_dumerili
ENSPREG00000015142	ddx56	100	84.164	ENSSLDG00000018369	ddx56	100	84.164	Seriola_lalandi_dorsalis
ENSPREG00000015142	ddx56	74	79.310	ENSSARG00000014363	DDX56	74	78.571	Sorex_araneus
ENSPREG00000015142	ddx56	98	71.636	ENSSPUG00000000784	DDX56	96	70.789	Sphenodon_punctatus
ENSPREG00000015142	ddx56	95	87.828	ENSSPAG00000009392	ddx56	99	87.828	Stegastes_partitus
ENSPREG00000015142	ddx56	98	63.768	ENSSSCG00000016745	DDX56	98	64.220	Sus_scrofa
ENSPREG00000015142	ddx56	100	81.738	ENSTRUG00000018623	ddx56	100	81.738	Takifugu_rubripes
ENSPREG00000015142	ddx56	100	81.338	ENSTNIG00000013593	ddx56	100	80.986	Tetraodon_nigroviridis
ENSPREG00000015142	ddx56	99	64.220	ENSTBEG00000007119	DDX56	98	64.220	Tupaia_belangeri
ENSPREG00000015142	ddx56	83	63.774	ENSTTRG00000010552	DDX56	97	63.774	Tursiops_truncatus
ENSPREG00000015142	ddx56	97	63.822	ENSUAMG00000014194	DDX56	97	64.007	Ursus_americanus
ENSPREG00000015142	ddx56	97	63.822	ENSUMAG00000009666	DDX56	97	64.007	Ursus_maritimus
ENSPREG00000015142	ddx56	97	63.619	ENSVVUG00000011905	DDX56	97	63.806	Vulpes_vulpes
ENSPREG00000015142	ddx56	99	71.351	ENSXETG00000019000	ddx56	99	71.351	Xenopus_tropicalis
ENSPREG00000015142	ddx56	100	94.434	ENSXCOG00000017413	ddx56	100	94.434	Xiphophorus_couchianus
ENSPREG00000015142	ddx56	100	97.133	ENSXMAG00000018749	ddx56	100	97.133	Xiphophorus_maculatus