EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000015232 (Gene tree)
Gene ID: 103466042
Gene Symbol: prpf18
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 7791 bases
Position: chrLG6:13871582-13879372
Accession: 103466042
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000022575	PRP4	PF08799.11	2.7e-13	1	1
ENSPREP00000022575	Prp18	PF02840.15	1.5e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000022812	-	1026	XM_008411345	ENSPREP00000022575	341 (aa)	XP_008409567	UPI0007E92D1E

Gene Model

Click here to download ENSPREG00000015232's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000015232's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000015232	prpf18	100	83.041	ENSG00000165630	PRPF18	100	83.041	Homo_sapiens
ENSPREG00000015232	prpf18	100	92.082	ENSAPOG00000024177	prpf18	100	92.082	Acanthochromis_polyacanthus
ENSPREG00000015232	prpf18	100	82.456	ENSAMEG00000013591	-	100	82.456	Ailuropoda_melanoleuca
ENSPREG00000015232	prpf18	100	92.375	ENSACIG00000001186	prpf18	100	92.375	Amphilophus_citrinellus
ENSPREG00000015232	prpf18	98	92.515	ENSAOCG00000006572	prpf18	94	90.058	Amphiprion_ocellaris
ENSPREG00000015232	prpf18	100	92.669	ENSAPEG00000004564	prpf18	100	92.669	Amphiprion_percula
ENSPREG00000015232	prpf18	100	91.789	ENSATEG00000000303	prpf18	100	91.789	Anabas_testudineus
ENSPREG00000015232	prpf18	99	81.765	ENSAPLG00000003387	-	99	81.765	Anas_platyrhynchos
ENSPREG00000015232	prpf18	100	82.558	ENSACAG00000000818	-	100	82.558	Anolis_carolinensis
ENSPREG00000015232	prpf18	100	83.041	ENSANAG00000037445	-	100	83.041	Aotus_nancymaae
ENSPREG00000015232	prpf18	100	91.496	ENSACLG00000026296	prpf18	100	91.496	Astatotilapia_calliptera
ENSPREG00000015232	prpf18	100	88.000	ENSAMXG00000012848	prpf18	100	88.000	Astyanax_mexicanus
ENSPREG00000015232	prpf18	100	82.164	ENSBTAG00000017244	PRPF18	100	82.164	Bos_taurus
ENSPREG00000015232	prpf18	98	41.379	WBGene00009320	F32B6.3	97	41.210	Caenorhabditis_elegans
ENSPREG00000015232	prpf18	100	83.041	ENSCJAG00000009432	-	100	83.041	Callithrix_jacchus
ENSPREG00000015232	prpf18	100	82.456	ENSCAFG00000004735	-	100	82.456	Canis_familiaris
ENSPREG00000015232	prpf18	100	82.456	ENSCAFG00020007712	-	100	82.456	Canis_lupus_dingo
ENSPREG00000015232	prpf18	100	82.164	ENSCHIG00000000499	-	100	82.164	Capra_hircus
ENSPREG00000015232	prpf18	100	82.749	ENSTSYG00000003517	-	100	82.749	Carlito_syrichta
ENSPREG00000015232	prpf18	100	83.041	ENSCPOG00000021069	-	100	83.041	Cavia_porcellus
ENSPREG00000015232	prpf18	100	83.041	ENSCCAG00000036822	-	100	83.041	Cebus_capucinus
ENSPREG00000015232	prpf18	100	72.222	ENSCATG00000016633	-	100	72.222	Cercocebus_atys
ENSPREG00000015232	prpf18	100	82.749	ENSCLAG00000011770	-	100	82.749	Chinchilla_lanigera
ENSPREG00000015232	prpf18	100	80.912	ENSCSAG00000013109	-	100	80.912	Chlorocebus_sabaeus
ENSPREG00000015232	prpf18	100	78.652	ENSCPBG00000003100	-	100	79.494	Chrysemys_picta_bellii
ENSPREG00000015232	prpf18	99	55.882	ENSCING00000020481	-	97	55.882	Ciona_intestinalis
ENSPREG00000015232	prpf18	99	55.325	ENSCSAVG00000010546	-	99	55.325	Ciona_savignyi
ENSPREG00000015232	prpf18	100	83.041	ENSCANG00000034900	-	100	83.041	Colobus_angolensis_palliatus
ENSPREG00000015232	prpf18	100	82.749	ENSCGRG00001023665	Prpf18	100	82.749	Cricetulus_griseus_chok1gshd
ENSPREG00000015232	prpf18	100	82.749	ENSCGRG00000014690	Prpf18	100	82.749	Cricetulus_griseus_crigri
ENSPREG00000015232	prpf18	100	88.856	ENSCSEG00000005536	prpf18	99	88.856	Cynoglossus_semilaevis
ENSPREG00000015232	prpf18	100	95.601	ENSCVAG00000012401	prpf18	100	95.601	Cyprinodon_variegatus
ENSPREG00000015232	prpf18	100	88.012	ENSDARG00000058306	prpf18	100	88.012	Danio_rerio
ENSPREG00000015232	prpf18	100	82.456	ENSDNOG00000035607	-	100	82.456	Dasypus_novemcinctus
ENSPREG00000015232	prpf18	100	82.164	ENSDORG00000000858	Prpf18	100	82.164	Dipodomys_ordii
ENSPREG00000015232	prpf18	99	52.663	FBgn0027784	Prp18	98	52.663	Drosophila_melanogaster
ENSPREG00000015232	prpf18	100	74.854	ENSETEG00000015060	-	100	74.854	Echinops_telfairi
ENSPREG00000015232	prpf18	100	69.164	ENSEBUG00000016502	prpf18	99	68.208	Eptatretus_burgeri
ENSPREG00000015232	prpf18	100	82.749	ENSEASG00005019373	-	100	82.749	Equus_asinus_asinus
ENSPREG00000015232	prpf18	100	82.749	ENSECAG00000006997	PRPF18	100	82.749	Equus_caballus
ENSPREG00000015232	prpf18	92	50.949	ENSEEUG00000001171	-	100	50.949	Erinaceus_europaeus
ENSPREG00000015232	prpf18	100	87.172	ENSELUG00000022190	prpf18	100	87.172	Esox_lucius
ENSPREG00000015232	prpf18	100	82.749	ENSFCAG00000004436	-	100	82.749	Felis_catus
ENSPREG00000015232	prpf18	92	78.769	ENSFALG00000001912	-	97	78.769	Ficedula_albicollis
ENSPREG00000015232	prpf18	94	84.688	ENSFDAG00000014026	-	100	84.688	Fukomys_damarensis
ENSPREG00000015232	prpf18	99	56.232	ENSFDAG00000010713	-	97	56.232	Fukomys_damarensis
ENSPREG00000015232	prpf18	80	96.703	ENSFHEG00000020125	prpf18	98	96.629	Fundulus_heteroclitus
ENSPREG00000015232	prpf18	99	86.176	ENSGMOG00000012210	prpf18	99	86.176	Gadus_morhua
ENSPREG00000015232	prpf18	100	82.749	ENSGALG00000043593	-	100	82.749	Gallus_gallus
ENSPREG00000015232	prpf18	100	96.774	ENSGAFG00000006034	prpf18	100	96.774	Gambusia_affinis
ENSPREG00000015232	prpf18	100	88.270	ENSGACG00000012232	prpf18	100	88.270	Gasterosteus_aculeatus
ENSPREG00000015232	prpf18	100	82.456	ENSGAGG00000016878	-	100	82.456	Gopherus_agassizii
ENSPREG00000015232	prpf18	92	81.962	ENSGGOG00000025188	-	96	81.962	Gorilla_gorilla
ENSPREG00000015232	prpf18	100	91.496	ENSHBUG00000010264	prpf18	100	91.496	Haplochromis_burtoni
ENSPREG00000015232	prpf18	100	82.456	ENSHGLG00000018534	PRPF18	100	82.456	Heterocephalus_glaber_female
ENSPREG00000015232	prpf18	94	84.375	ENSHGLG00100012161	-	98	84.375	Heterocephalus_glaber_male
ENSPREG00000015232	prpf18	100	92.669	ENSHCOG00000015987	prpf18	100	92.669	Hippocampus_comes
ENSPREG00000015232	prpf18	100	82.153	ENSIPUG00000007432	prpf18	100	82.153	Ictalurus_punctatus
ENSPREG00000015232	prpf18	100	82.749	ENSSTOG00000008735	-	100	82.749	Ictidomys_tridecemlineatus
ENSPREG00000015232	prpf18	100	83.041	ENSJJAG00000024041	-	100	83.041	Jaculus_jaculus
ENSPREG00000015232	prpf18	100	60.641	ENSJJAG00000015191	-	100	60.641	Jaculus_jaculus
ENSPREG00000015232	prpf18	100	93.255	ENSKMAG00000012124	prpf18	100	93.255	Kryptolebias_marmoratus
ENSPREG00000015232	prpf18	100	85.337	ENSLBEG00000028466	prpf18	99	86.607	Labrus_bergylta
ENSPREG00000015232	prpf18	100	83.626	ENSLACG00000009885	prpf18	100	84.211	Latimeria_chalumnae
ENSPREG00000015232	prpf18	100	87.427	ENSLOCG00000016736	prpf18	100	87.427	Lepisosteus_oculatus
ENSPREG00000015232	prpf18	100	83.041	ENSLAFG00000007753	-	100	83.041	Loxodonta_africana
ENSPREG00000015232	prpf18	100	83.041	ENSMFAG00000000540	-	100	83.041	Macaca_fascicularis
ENSPREG00000015232	prpf18	100	83.041	ENSMMUG00000015071	PRPF18	93	90.728	Macaca_mulatta
ENSPREG00000015232	prpf18	100	83.041	ENSMNEG00000024679	-	100	83.041	Macaca_nemestrina
ENSPREG00000015232	prpf18	100	67.836	ENSMLEG00000031715	-	100	67.836	Mandrillus_leucophaeus
ENSPREG00000015232	prpf18	100	91.789	ENSMAMG00000006610	prpf18	100	91.789	Mastacembelus_armatus
ENSPREG00000015232	prpf18	100	91.496	ENSMZEG00005019392	prpf18	100	91.496	Maylandia_zebra
ENSPREG00000015232	prpf18	100	82.749	ENSMGAG00000005023	-	100	82.749	Meleagris_gallopavo
ENSPREG00000015232	prpf18	100	83.333	ENSMICG00000006572	-	100	83.333	Microcebus_murinus
ENSPREG00000015232	prpf18	100	83.041	ENSMOCG00000021468	Prpf18	100	83.041	Microtus_ochrogaster
ENSPREG00000015232	prpf18	100	92.375	ENSMMOG00000013012	prpf18	100	92.375	Mola_mola
ENSPREG00000015232	prpf18	100	75.439	ENSMODG00000024043	-	100	75.439	Monodelphis_domestica
ENSPREG00000015232	prpf18	99	75.862	ENSMODG00000016902	-	95	75.862	Monodelphis_domestica
ENSPREG00000015232	prpf18	100	83.095	ENSMALG00000005486	prpf18	100	83.381	Monopterus_albus
ENSPREG00000015232	prpf18	100	82.456	MGP_CAROLIEiJ_G0023143	Prpf18	100	94.521	Mus_caroli
ENSPREG00000015232	prpf18	100	82.749	ENSMUSG00000039449	Prpf18	100	94.521	Mus_musculus
ENSPREG00000015232	prpf18	100	82.749	MGP_PahariEiJ_G0019203	Prpf18	100	94.521	Mus_pahari
ENSPREG00000015232	prpf18	100	82.749	MGP_SPRETEiJ_G0024061	Prpf18	100	94.521	Mus_spretus
ENSPREG00000015232	prpf18	100	82.164	ENSMPUG00000000938	-	100	82.164	Mustela_putorius_furo
ENSPREG00000015232	prpf18	100	82.164	ENSMLUG00000009200	-	100	82.164	Myotis_lucifugus
ENSPREG00000015232	prpf18	68	81.034	ENSNGAG00000023550	-	83	81.034	Nannospalax_galili
ENSPREG00000015232	prpf18	100	83.041	ENSNGAG00000012500	-	100	83.041	Nannospalax_galili
ENSPREG00000015232	prpf18	100	91.202	ENSNBRG00000001778	prpf18	100	91.202	Neolamprologus_brichardi
ENSPREG00000015232	prpf18	100	83.041	ENSNLEG00000012186	-	100	83.041	Nomascus_leucogenys
ENSPREG00000015232	prpf18	76	71.815	ENSMEUG00000005032	-	75	71.815	Notamacropus_eugenii
ENSPREG00000015232	prpf18	77	63.019	ENSOPRG00000002153	-	100	63.019	Ochotona_princeps
ENSPREG00000015232	prpf18	100	82.456	ENSODEG00000003770	-	100	82.456	Octodon_degus
ENSPREG00000015232	prpf18	98	91.617	ENSONIG00000014854	prpf18	96	91.617	Oreochromis_niloticus
ENSPREG00000015232	prpf18	100	83.918	ENSOANG00000015404	-	100	83.918	Ornithorhynchus_anatinus
ENSPREG00000015232	prpf18	100	82.749	ENSOCUG00000027756	-	96	83.486	Oryctolagus_cuniculus
ENSPREG00000015232	prpf18	100	88.286	ENSORLG00000010293	prpf18	100	88.286	Oryzias_latipes
ENSPREG00000015232	prpf18	100	90.616	ENSORLG00020001530	prpf18	100	90.616	Oryzias_latipes_hni
ENSPREG00000015232	prpf18	100	90.323	ENSORLG00015013705	prpf18	100	90.323	Oryzias_latipes_hsok
ENSPREG00000015232	prpf18	100	91.496	ENSOMEG00000009167	prpf18	100	91.496	Oryzias_melastigma
ENSPREG00000015232	prpf18	100	82.164	ENSOGAG00000007294	-	100	82.164	Otolemur_garnettii
ENSPREG00000015232	prpf18	100	80.342	ENSOARG00000006243	-	100	80.342	Ovis_aries
ENSPREG00000015232	prpf18	100	83.041	ENSPPAG00000041959	-	100	83.041	Pan_paniscus
ENSPREG00000015232	prpf18	100	82.749	ENSPPRG00000000107	-	100	82.749	Panthera_pardus
ENSPREG00000015232	prpf18	100	82.749	ENSPTIG00000021094	-	100	82.749	Panthera_tigris_altaica
ENSPREG00000015232	prpf18	100	83.041	ENSPTRG00000002306	PRPF18	100	83.041	Pan_troglodytes
ENSPREG00000015232	prpf18	100	82.749	ENSPANG00000023346	-	100	82.749	Papio_anubis
ENSPREG00000015232	prpf18	86	100.000	ENSPKIG00000014128	prpf18	96	84.330	Paramormyrops_kingsleyae
ENSPREG00000015232	prpf18	100	82.164	ENSPSIG00000016064	-	100	82.164	Pelodiscus_sinensis
ENSPREG00000015232	prpf18	100	83.626	ENSPMGG00000016486	prpf18	100	83.626	Periophthalmus_magnuspinnatus
ENSPREG00000015232	prpf18	100	82.749	ENSPEMG00000013704	Prpf18	100	82.749	Peromyscus_maniculatus_bairdii
ENSPREG00000015232	prpf18	100	72.754	ENSPMAG00000000204	prpf18	100	72.754	Petromyzon_marinus
ENSPREG00000015232	prpf18	92	81.962	ENSPCIG00000012963	-	99	81.962	Phascolarctos_cinereus
ENSPREG00000015232	prpf18	100	94.286	ENSPFOG00000017611	prpf18	100	94.286	Poecilia_formosa
ENSPREG00000015232	prpf18	100	96.774	ENSPLAG00000000369	prpf18	100	96.774	Poecilia_latipinna
ENSPREG00000015232	prpf18	100	97.067	ENSPMEG00000005183	prpf18	100	97.067	Poecilia_mexicana
ENSPREG00000015232	prpf18	100	82.749	ENSPPYG00000002101	PRPF18	100	82.749	Pongo_abelii
ENSPREG00000015232	prpf18	100	65.205	ENSPCAG00000010833	-	100	65.205	Procavia_capensis
ENSPREG00000015232	prpf18	100	79.179	ENSPCOG00000013057	-	100	79.179	Propithecus_coquereli
ENSPREG00000015232	prpf18	100	49.415	ENSPVAG00000002947	-	100	49.415	Pteropus_vampyrus
ENSPREG00000015232	prpf18	100	91.202	ENSPNYG00000003554	prpf18	100	91.202	Pundamilia_nyererei
ENSPREG00000015232	prpf18	100	86.040	ENSPNAG00000023151	prpf18	100	86.040	Pygocentrus_nattereri
ENSPREG00000015232	prpf18	100	82.749	ENSRNOG00000018396	Prpf18	100	82.749	Rattus_norvegicus
ENSPREG00000015232	prpf18	100	83.333	ENSRBIG00000028028	-	100	83.333	Rhinopithecus_bieti
ENSPREG00000015232	prpf18	100	83.041	ENSRROG00000040695	-	100	83.041	Rhinopithecus_roxellana
ENSPREG00000015232	prpf18	100	83.041	ENSSBOG00000034482	-	100	83.041	Saimiri_boliviensis_boliviensis
ENSPREG00000015232	prpf18	100	83.333	ENSSHAG00000016463	-	100	83.333	Sarcophilus_harrisii
ENSPREG00000015232	prpf18	100	69.591	ENSSHAG00000009669	-	100	69.591	Sarcophilus_harrisii
ENSPREG00000015232	prpf18	77	43.939	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSPREG00000015232	prpf18	98	84.058	ENSSFOG00015022118	prpf18	100	79.251	Scleropages_formosus
ENSPREG00000015232	prpf18	100	89.150	ENSSMAG00000005308	prpf18	100	89.150	Scophthalmus_maximus
ENSPREG00000015232	prpf18	100	92.375	ENSSDUG00000015428	prpf18	100	92.375	Seriola_dumerili
ENSPREG00000015232	prpf18	100	92.669	ENSSLDG00000023989	prpf18	100	92.669	Seriola_lalandi_dorsalis
ENSPREG00000015232	prpf18	100	54.971	ENSSARG00000005307	-	100	54.971	Sorex_araneus
ENSPREG00000015232	prpf18	100	83.041	ENSSPUG00000002619	-	100	83.041	Sphenodon_punctatus
ENSPREG00000015232	prpf18	100	92.669	ENSSPAG00000019502	prpf18	100	92.669	Stegastes_partitus
ENSPREG00000015232	prpf18	100	82.456	ENSSSCG00000026354	-	100	82.456	Sus_scrofa
ENSPREG00000015232	prpf18	100	82.456	ENSTGUG00000002286	-	100	82.456	Taeniopygia_guttata
ENSPREG00000015232	prpf18	100	89.443	ENSTRUG00000011278	prpf18	100	89.443	Takifugu_rubripes
ENSPREG00000015232	prpf18	100	90.029	ENSTNIG00000000911	prpf18	100	90.029	Tetraodon_nigroviridis
ENSPREG00000015232	prpf18	79	98.718	ENSTBEG00000013011	-	79	98.718	Tupaia_belangeri
ENSPREG00000015232	prpf18	100	83.333	ENSTTRG00000011117	PRPF18	100	83.333	Tursiops_truncatus
ENSPREG00000015232	prpf18	91	84.887	ENSUAMG00000001815	-	93	84.887	Ursus_americanus
ENSPREG00000015232	prpf18	100	77.778	ENSUMAG00000012329	-	100	77.778	Ursus_maritimus
ENSPREG00000015232	prpf18	100	76.901	ENSVPAG00000011486	-	100	76.901	Vicugna_pacos
ENSPREG00000015232	prpf18	100	82.456	ENSVVUG00000005453	-	100	82.456	Vulpes_vulpes
ENSPREG00000015232	prpf18	100	75.652	ENSXETG00000024057	prpf18	100	75.652	Xenopus_tropicalis
ENSPREG00000015232	prpf18	100	96.501	ENSXCOG00000020414	prpf18	100	96.501	Xiphophorus_couchianus
ENSPREG00000015232	prpf18	100	97.361	ENSXMAG00000004713	prpf18	91	97.361	Xiphophorus_maculatus