EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000015319 (Gene tree)
Gene ID: 103469113
Gene Symbol: si:ch211-11k18.4
Alias: -
Full Name: sarcalumenin-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 11307 bases
Position: chrLG8:20882777-20894083
Accession: 103469113
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000022706	MMR_HSR1	PF01926.23	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000022943	-	1317	XM_008416624	ENSPREP00000022706	438 (aa)	XP_008414846	-

Gene Model

Click here to download ENSPREG00000015319's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000015319's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000015319	si:ch211-11k18.4	98	57.763	ENSPREG00000000708	si:dkey-98f17.5	99	57.763

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000015319	si:ch211-11k18.4	97	84.235	ENSAPOG00000018833	si:ch211-11k18.4	91	86.945	Acanthochromis_polyacanthus
ENSPREG00000015319	si:ch211-11k18.4	98	59.861	ENSAPOG00000010378	si:dkey-98f17.5	98	59.226	Acanthochromis_polyacanthus
ENSPREG00000015319	si:ch211-11k18.4	98	58.314	ENSACIG00000017719	si:dkey-98f17.5	98	58.314	Amphilophus_citrinellus
ENSPREG00000015319	si:ch211-11k18.4	92	84.367	ENSACIG00000006696	si:ch211-11k18.4	89	84.367	Amphilophus_citrinellus
ENSPREG00000015319	si:ch211-11k18.4	98	60.093	ENSAOCG00000008661	si:dkey-98f17.5	94	60.093	Amphiprion_ocellaris
ENSPREG00000015319	si:ch211-11k18.4	97	84.706	ENSAOCG00000014284	si:ch211-11k18.4	93	84.706	Amphiprion_ocellaris
ENSPREG00000015319	si:ch211-11k18.4	98	59.453	ENSAPEG00000022447	si:dkey-98f17.5	98	59.453	Amphiprion_percula
ENSPREG00000015319	si:ch211-11k18.4	97	84.471	ENSAPEG00000014910	si:ch211-11k18.4	93	84.471	Amphiprion_percula
ENSPREG00000015319	si:ch211-11k18.4	97	83.765	ENSATEG00000004775	si:ch211-11k18.4	93	83.765	Anabas_testudineus
ENSPREG00000015319	si:ch211-11k18.4	98	59.861	ENSATEG00000007188	si:dkey-98f17.5	94	59.861	Anabas_testudineus
ENSPREG00000015319	si:ch211-11k18.4	86	66.667	ENSACAG00000028632	-	93	61.737	Anolis_carolinensis
ENSPREG00000015319	si:ch211-11k18.4	98	58.314	ENSACLG00000001308	si:dkey-98f17.5	98	58.314	Astatotilapia_calliptera
ENSPREG00000015319	si:ch211-11k18.4	97	83.059	ENSACLG00000007907	si:ch211-11k18.4	93	83.059	Astatotilapia_calliptera
ENSPREG00000015319	si:ch211-11k18.4	92	61.386	ENSAMXG00000001190	si:dkey-98f17.5	90	61.386	Astyanax_mexicanus
ENSPREG00000015319	si:ch211-11k18.4	98	78.140	ENSAMXG00000017817	si:ch211-11k18.4	94	78.140	Astyanax_mexicanus
ENSPREG00000015319	si:ch211-11k18.4	86	61.008	ENSCING00000020807	-	99	61.008	Ciona_intestinalis
ENSPREG00000015319	si:ch211-11k18.4	85	63.733	ENSCSAVG00000009987	-	94	58.333	Ciona_savignyi
ENSPREG00000015319	si:ch211-11k18.4	98	59.226	ENSCSEG00000017512	si:dkey-98f17.5	95	59.806	Cynoglossus_semilaevis
ENSPREG00000015319	si:ch211-11k18.4	85	84.906	ENSCSEG00000017661	si:ch211-11k18.4	94	78.837	Cynoglossus_semilaevis
ENSPREG00000015319	si:ch211-11k18.4	98	59.815	ENSCVAG00000011351	si:dkey-98f17.5	94	59.815	Cyprinodon_variegatus
ENSPREG00000015319	si:ch211-11k18.4	97	87.294	ENSCVAG00000015346	si:ch211-11k18.4	93	87.294	Cyprinodon_variegatus
ENSPREG00000015319	si:ch211-11k18.4	97	76.941	ENSDARG00000087869	si:ch211-11k18.4	100	87.755	Danio_rerio
ENSPREG00000015319	si:ch211-11k18.4	92	60.396	ENSDARG00000068863	si:dkey-98f17.5	92	60.396	Danio_rerio
ENSPREG00000015319	si:ch211-11k18.4	81	59.718	ENSEBUG00000007620	si:dkey-98f17.5	89	62.162	Eptatretus_burgeri
ENSPREG00000015319	si:ch211-11k18.4	95	58.080	ENSELUG00000003365	si:dkey-98f17.5	85	68.889	Esox_lucius
ENSPREG00000015319	si:ch211-11k18.4	97	84.706	ENSFHEG00000019820	si:ch211-11k18.4	93	84.706	Fundulus_heteroclitus
ENSPREG00000015319	si:ch211-11k18.4	98	58.933	ENSFHEG00000012744	si:dkey-98f17.5	94	58.933	Fundulus_heteroclitus
ENSPREG00000015319	si:ch211-11k18.4	92	77.307	ENSGMOG00000003492	si:ch211-11k18.4	99	77.307	Gadus_morhua
ENSPREG00000015319	si:ch211-11k18.4	98	57.403	ENSGAFG00000012362	si:dkey-98f17.5	87	57.403	Gambusia_affinis
ENSPREG00000015319	si:ch211-11k18.4	97	89.647	ENSGAFG00000005677	si:ch211-11k18.4	93	89.647	Gambusia_affinis
ENSPREG00000015319	si:ch211-11k18.4	92	86.284	ENSGACG00000013134	si:ch211-11k18.4	99	86.284	Gasterosteus_aculeatus
ENSPREG00000015319	si:ch211-11k18.4	59	73.846	ENSGACG00000009399	si:dkey-98f17.5	100	73.846	Gasterosteus_aculeatus
ENSPREG00000015319	si:ch211-11k18.4	97	83.294	ENSHBUG00000020638	si:ch211-11k18.4	93	83.294	Haplochromis_burtoni
ENSPREG00000015319	si:ch211-11k18.4	98	58.542	ENSHBUG00000008331	si:dkey-98f17.5	98	58.542	Haplochromis_burtoni
ENSPREG00000015319	si:ch211-11k18.4	87	64.380	ENSHCOG00000016505	si:dkey-98f17.5	85	64.380	Hippocampus_comes
ENSPREG00000015319	si:ch211-11k18.4	97	82.588	ENSHCOG00000014773	si:ch211-11k18.4	93	82.588	Hippocampus_comes
ENSPREG00000015319	si:ch211-11k18.4	81	65.070	ENSIPUG00000019981	si:dkey-98f17.5	74	68.168	Ictalurus_punctatus
ENSPREG00000015319	si:ch211-11k18.4	92	67.901	ENSIPUG00000016694	si:ch211-11k18.4	89	67.901	Ictalurus_punctatus
ENSPREG00000015319	si:ch211-11k18.4	87	79.534	ENSIPUG00000016678	si:ch211-11k18.4	95	79.534	Ictalurus_punctatus
ENSPREG00000015319	si:ch211-11k18.4	92	88.030	ENSKMAG00000009327	si:ch211-11k18.4	89	88.030	Kryptolebias_marmoratus
ENSPREG00000015319	si:ch211-11k18.4	98	58.199	ENSKMAG00000014997	si:dkey-98f17.5	94	58.199	Kryptolebias_marmoratus
ENSPREG00000015319	si:ch211-11k18.4	92	62.624	ENSLBEG00000012756	si:dkey-98f17.5	98	58.730	Labrus_bergylta
ENSPREG00000015319	si:ch211-11k18.4	91	59.500	ENSLACG00000017433	si:dkey-98f17.5	88	59.553	Latimeria_chalumnae
ENSPREG00000015319	si:ch211-11k18.4	91	64.500	ENSLACG00000004899	-	89	64.500	Latimeria_chalumnae
ENSPREG00000015319	si:ch211-11k18.4	87	72.135	ENSLACG00000006280	si:ch211-11k18.4	94	67.981	Latimeria_chalumnae
ENSPREG00000015319	si:ch211-11k18.4	98	58.333	ENSLOCG00000003824	si:dkey-98f17.5	94	58.333	Lepisosteus_oculatus
ENSPREG00000015319	si:ch211-11k18.4	98	58.087	ENSMAMG00000014528	si:dkey-98f17.5	98	58.087	Mastacembelus_armatus
ENSPREG00000015319	si:ch211-11k18.4	97	83.529	ENSMAMG00000002536	si:ch211-11k18.4	96	83.529	Mastacembelus_armatus
ENSPREG00000015319	si:ch211-11k18.4	98	58.542	ENSMZEG00005016572	si:dkey-98f17.5	98	58.542	Maylandia_zebra
ENSPREG00000015319	si:ch211-11k18.4	97	82.824	ENSMZEG00005008941	si:ch211-11k18.4	93	82.824	Maylandia_zebra
ENSPREG00000015319	si:ch211-11k18.4	97	76.995	ENSMMOG00000012485	si:ch211-11k18.4	93	76.995	Mola_mola
ENSPREG00000015319	si:ch211-11k18.4	97	82.353	ENSMALG00000019735	si:ch211-11k18.4	93	82.353	Monopterus_albus
ENSPREG00000015319	si:ch211-11k18.4	92	62.189	ENSMALG00000012761	si:dkey-98f17.5	99	58.945	Monopterus_albus
ENSPREG00000015319	si:ch211-11k18.4	98	58.810	ENSNBRG00000006068	si:dkey-98f17.5	98	58.810	Neolamprologus_brichardi
ENSPREG00000015319	si:ch211-11k18.4	97	82.824	ENSNBRG00000002220	si:ch211-11k18.4	95	82.824	Neolamprologus_brichardi
ENSPREG00000015319	si:ch211-11k18.4	97	84.235	ENSONIG00000019412	si:ch211-11k18.4	93	84.235	Oreochromis_niloticus
ENSPREG00000015319	si:ch211-11k18.4	98	58.998	ENSONIG00000013568	si:dkey-98f17.5	98	58.998	Oreochromis_niloticus
ENSPREG00000015319	si:ch211-11k18.4	97	81.882	ENSORLG00000012015	si:ch211-11k18.4	93	81.882	Oryzias_latipes
ENSPREG00000015319	si:ch211-11k18.4	89	60.714	ENSORLG00000007958	si:dkey-98f17.5	90	60.714	Oryzias_latipes
ENSPREG00000015319	si:ch211-11k18.4	98	58.933	ENSORLG00020013350	si:dkey-98f17.5	94	58.933	Oryzias_latipes_hni
ENSPREG00000015319	si:ch211-11k18.4	87	86.162	ENSORLG00020012386	si:ch211-11k18.4	93	81.412	Oryzias_latipes_hni
ENSPREG00000015319	si:ch211-11k18.4	97	82.118	ENSORLG00015022862	si:ch211-11k18.4	93	82.118	Oryzias_latipes_hsok
ENSPREG00000015319	si:ch211-11k18.4	98	58.933	ENSORLG00015002000	si:dkey-98f17.5	94	58.933	Oryzias_latipes_hsok
ENSPREG00000015319	si:ch211-11k18.4	97	82.353	ENSOMEG00000018686	si:ch211-11k18.4	93	82.353	Oryzias_melastigma
ENSPREG00000015319	si:ch211-11k18.4	98	58.701	ENSOMEG00000003154	si:dkey-98f17.5	97	58.701	Oryzias_melastigma
ENSPREG00000015319	si:ch211-11k18.4	87	77.546	ENSPKIG00000023918	-	87	76.500	Paramormyrops_kingsleyae
ENSPREG00000015319	si:ch211-11k18.4	86	81.649	ENSPKIG00000018807	si:ch211-11k18.4	93	76.471	Paramormyrops_kingsleyae
ENSPREG00000015319	si:ch211-11k18.4	98	58.237	ENSPKIG00000024621	si:dkey-98f17.5	94	58.237	Paramormyrops_kingsleyae
ENSPREG00000015319	si:ch211-11k18.4	98	57.541	ENSPMGG00000019065	si:dkey-98f17.5	94	57.541	Periophthalmus_magnuspinnatus
ENSPREG00000015319	si:ch211-11k18.4	97	83.529	ENSPMGG00000016507	si:ch211-11k18.4	93	83.529	Periophthalmus_magnuspinnatus
ENSPREG00000015319	si:ch211-11k18.4	97	93.412	ENSPFOG00000007976	si:ch211-11k18.4	93	93.412	Poecilia_formosa
ENSPREG00000015319	si:ch211-11k18.4	98	57.692	ENSPFOG00000015142	si:dkey-98f17.5	98	57.692	Poecilia_formosa
ENSPREG00000015319	si:ch211-11k18.4	92	97.756	ENSPLAG00000019794	si:ch211-11k18.4	89	97.756	Poecilia_latipinna
ENSPREG00000015319	si:ch211-11k18.4	98	58.087	ENSPLAG00000003709	si:dkey-98f17.5	98	58.087	Poecilia_latipinna
ENSPREG00000015319	si:ch211-11k18.4	98	57.859	ENSPMEG00000018709	si:dkey-98f17.5	84	62.189	Poecilia_mexicana
ENSPREG00000015319	si:ch211-11k18.4	97	93.176	ENSPMEG00000024198	si:ch211-11k18.4	97	93.176	Poecilia_mexicana
ENSPREG00000015319	si:ch211-11k18.4	98	58.542	ENSPNYG00000017266	si:dkey-98f17.5	98	58.542	Pundamilia_nyererei
ENSPREG00000015319	si:ch211-11k18.4	97	83.294	ENSPNYG00000017099	si:ch211-11k18.4	93	83.294	Pundamilia_nyererei
ENSPREG00000015319	si:ch211-11k18.4	92	61.692	ENSPNAG00000021352	si:dkey-98f17.5	89	61.692	Pygocentrus_nattereri
ENSPREG00000015319	si:ch211-11k18.4	97	79.294	ENSPNAG00000022138	si:ch211-11k18.4	93	79.294	Pygocentrus_nattereri
ENSPREG00000015319	si:ch211-11k18.4	97	74.353	ENSSFOG00015000985	si:ch211-11k18.4	88	74.353	Scleropages_formosus
ENSPREG00000015319	si:ch211-11k18.4	94	57.447	ENSSFOG00015017965	si:dkey-98f17.5	94	56.635	Scleropages_formosus
ENSPREG00000015319	si:ch211-11k18.4	98	58.542	ENSSMAG00000011905	si:dkey-98f17.5	98	58.542	Scophthalmus_maximus
ENSPREG00000015319	si:ch211-11k18.4	92	86.035	ENSSMAG00000009651	si:ch211-11k18.4	89	86.035	Scophthalmus_maximus
ENSPREG00000015319	si:ch211-11k18.4	97	83.529	ENSSDUG00000016411	si:ch211-11k18.4	93	83.529	Seriola_dumerili
ENSPREG00000015319	si:ch211-11k18.4	97	58.295	ENSSDUG00000013457	si:dkey-98f17.5	97	58.295	Seriola_dumerili
ENSPREG00000015319	si:ch211-11k18.4	97	58.065	ENSSLDG00000025395	si:dkey-98f17.5	97	58.065	Seriola_lalandi_dorsalis
ENSPREG00000015319	si:ch211-11k18.4	97	83.529	ENSSLDG00000019145	si:ch211-11k18.4	93	83.529	Seriola_lalandi_dorsalis
ENSPREG00000015319	si:ch211-11k18.4	74	70.031	ENSSPUG00000010096	-	88	68.497	Sphenodon_punctatus
ENSPREG00000015319	si:ch211-11k18.4	97	83.765	ENSSPAG00000010697	si:ch211-11k18.4	93	83.765	Stegastes_partitus
ENSPREG00000015319	si:ch211-11k18.4	98	60.093	ENSSPAG00000018800	si:dkey-98f17.5	94	60.093	Stegastes_partitus
ENSPREG00000015319	si:ch211-11k18.4	98	58.087	ENSTRUG00000021287	si:dkey-98f17.5	98	58.087	Takifugu_rubripes
ENSPREG00000015319	si:ch211-11k18.4	98	80.465	ENSTRUG00000020291	si:ch211-11k18.4	94	80.465	Takifugu_rubripes
ENSPREG00000015319	si:ch211-11k18.4	91	68.486	ENSXETG00000031783	-	89	68.486	Xenopus_tropicalis
ENSPREG00000015319	si:ch211-11k18.4	98	57.895	ENSXCOG00000017002	si:dkey-98f17.5	98	57.895	Xiphophorus_couchianus
ENSPREG00000015319	si:ch211-11k18.4	91	89.500	ENSXCOG00000018094	si:ch211-11k18.4	88	90.609	Xiphophorus_couchianus
ENSPREG00000015319	si:ch211-11k18.4	97	91.059	ENSXMAG00000021235	si:ch211-11k18.4	93	91.059	Xiphophorus_maculatus
ENSPREG00000015319	si:ch211-11k18.4	98	58.661	ENSXMAG00000007688	si:dkey-98f17.5	89	58.661	Xiphophorus_maculatus