EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000015515 (Gene tree)
Gene ID: -
Gene Symbol: snrpb
Alias: zgc:77315
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 3714 bases
Position: chrKK215297.1:69833-73546
Accession: ZDB-GENE-040426-1819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000022980	LSM	PF01423.22	5.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000023218	-	654	-	ENSPREP00000022980	217 (aa)	-	-

Gene Model

Click here to download ENSPREG00000015515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000015515's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000015515	snrpb	62	95.556	ENSG00000125835	SNRPB	66	97.826	Homo_sapiens
ENSPREG00000015515	snrpb	62	100.000	ENSAPOG00000019606	snrpb	73	78.505	Acanthochromis_polyacanthus
ENSPREG00000015515	snrpb	62	95.556	ENSAMEG00000011353	SNRPB	67	76.842	Ailuropoda_melanoleuca
ENSPREG00000015515	snrpb	63	100.000	ENSACIG00000014480	snrpb	96	78.605	Amphilophus_citrinellus
ENSPREG00000015515	snrpb	62	100.000	ENSAOCG00000006876	snrpb	89	80.841	Amphiprion_ocellaris
ENSPREG00000015515	snrpb	63	99.270	ENSAPEG00000021585	snrpb	93	85.024	Amphiprion_percula
ENSPREG00000015515	snrpb	62	100.000	ENSATEG00000009836	snrpb	89	78.037	Anabas_testudineus
ENSPREG00000015515	snrpb	62	88.148	ENSANAG00000036271	-	77	71.579	Aotus_nancymaae
ENSPREG00000015515	snrpb	62	95.556	ENSANAG00000024443	-	82	76.842	Aotus_nancymaae
ENSPREG00000015515	snrpb	62	100.000	ENSACLG00000014707	snrpb	89	80.841	Astatotilapia_calliptera
ENSPREG00000015515	snrpb	62	99.259	ENSAMXG00000029434	snrpb	79	80.319	Astyanax_mexicanus
ENSPREG00000015515	snrpb	62	95.556	ENSBTAG00000001038	SNRPB	82	76.842	Bos_taurus
ENSPREG00000015515	snrpb	62	95.556	ENSCJAG00000020971	-	82	76.842	Callithrix_jacchus
ENSPREG00000015515	snrpb	62	95.556	ENSCAFG00000006693	-	82	76.842	Canis_familiaris
ENSPREG00000015515	snrpb	62	83.704	ENSCAFG00000031109	-	56	82.222	Canis_familiaris
ENSPREG00000015515	snrpb	62	95.556	ENSCHIG00000025449	-	82	76.842	Capra_hircus
ENSPREG00000015515	snrpb	62	95.556	ENSTSYG00000014498	-	82	76.842	Carlito_syrichta
ENSPREG00000015515	snrpb	69	69.481	ENSTSYG00000032303	-	50	75.912	Carlito_syrichta
ENSPREG00000015515	snrpb	62	95.556	ENSCAPG00000012669	SNRPB	83	76.842	Cavia_aperea
ENSPREG00000015515	snrpb	62	95.556	ENSCPOG00000039408	SNRPB	82	76.842	Cavia_porcellus
ENSPREG00000015515	snrpb	62	95.556	ENSCCAG00000026002	SNRPB	82	76.842	Cebus_capucinus
ENSPREG00000015515	snrpb	56	82.787	ENSCCAG00000035140	-	81	82.609	Cebus_capucinus
ENSPREG00000015515	snrpb	62	95.556	ENSCATG00000030230	SNRPB	82	76.842	Cercocebus_atys
ENSPREG00000015515	snrpb	62	95.556	ENSCLAG00000012442	SNRPB	80	76.842	Chinchilla_lanigera
ENSPREG00000015515	snrpb	62	95.556	ENSCSAG00000010840	SNRPB	82	76.842	Chlorocebus_sabaeus
ENSPREG00000015515	snrpb	62	97.778	ENSCPBG00000026801	SNRPB	83	78.421	Chrysemys_picta_bellii
ENSPREG00000015515	snrpb	62	95.556	ENSCANG00000019461	SNRPB	82	76.842	Colobus_angolensis_palliatus
ENSPREG00000015515	snrpb	62	95.556	ENSCGRG00001023046	Snrpb	82	76.842	Cricetulus_griseus_chok1gshd
ENSPREG00000015515	snrpb	62	95.556	ENSCGRG00000010423	Snrpb	84	76.596	Cricetulus_griseus_crigri
ENSPREG00000015515	snrpb	62	98.519	ENSCSEG00000020328	snrpb	89	70.755	Cynoglossus_semilaevis
ENSPREG00000015515	snrpb	62	98.519	ENSDARG00000011125	snrpb	89	68.075	Danio_rerio
ENSPREG00000015515	snrpb	62	70.149	FBgn0262601	SmB	66	70.149	Drosophila_melanogaster
ENSPREG00000015515	snrpb	62	88.148	ENSEBUG00000007467	SNRPB	56	88.148	Eptatretus_burgeri
ENSPREG00000015515	snrpb	62	94.815	ENSEASG00005012991	SNRPB	82	76.316	Equus_asinus_asinus
ENSPREG00000015515	snrpb	62	95.556	ENSECAG00000011944	SNRPB	82	76.842	Equus_caballus
ENSPREG00000015515	snrpb	62	95.556	ENSEEUG00000015568	SNRPB	67	76.842	Erinaceus_europaeus
ENSPREG00000015515	snrpb	63	100.000	ENSELUG00000014564	snrpb	95	74.178	Esox_lucius
ENSPREG00000015515	snrpb	62	95.556	ENSFCAG00000034090	-	82	76.842	Felis_catus
ENSPREG00000015515	snrpb	62	95.556	ENSFDAG00000009937	SNRPB	82	76.842	Fukomys_damarensis
ENSPREG00000015515	snrpb	62	99.259	ENSGAFG00000019558	snrpb	59	99.259	Gambusia_affinis
ENSPREG00000015515	snrpb	62	100.000	ENSGACG00000003262	snrpb	57	100.000	Gasterosteus_aculeatus
ENSPREG00000015515	snrpb	62	95.556	ENSGGOG00000016138	SNRPB	82	76.842	Gorilla_gorilla
ENSPREG00000015515	snrpb	62	100.000	ENSHBUG00000008369	snrpb	89	80.841	Haplochromis_burtoni
ENSPREG00000015515	snrpb	62	95.556	ENSHGLG00000016241	-	82	76.842	Heterocephalus_glaber_female
ENSPREG00000015515	snrpb	62	85.926	ENSHGLG00000016505	-	65	85.926	Heterocephalus_glaber_female
ENSPREG00000015515	snrpb	62	85.926	ENSHGLG00100004178	-	65	85.926	Heterocephalus_glaber_male
ENSPREG00000015515	snrpb	62	95.556	ENSHGLG00100012877	-	82	76.842	Heterocephalus_glaber_male
ENSPREG00000015515	snrpb	62	100.000	ENSHCOG00000014888	snrpb	89	71.698	Hippocampus_comes
ENSPREG00000015515	snrpb	62	98.519	ENSIPUG00000024569	SNRPB	89	68.075	Ictalurus_punctatus
ENSPREG00000015515	snrpb	62	95.556	ENSSTOG00000027821	-	61	95.556	Ictidomys_tridecemlineatus
ENSPREG00000015515	snrpb	62	95.556	ENSJJAG00000024170	Snrpb	82	76.842	Jaculus_jaculus
ENSPREG00000015515	snrpb	62	99.259	ENSKMAG00000014494	snrpb	55	99.259	Kryptolebias_marmoratus
ENSPREG00000015515	snrpb	62	100.000	ENSLBEG00000005678	snrpb	89	71.698	Labrus_bergylta
ENSPREG00000015515	snrpb	62	98.519	ENSLACG00000011459	SNRPB	56	98.519	Latimeria_chalumnae
ENSPREG00000015515	snrpb	62	99.259	ENSLOCG00000002687	snrpb	89	68.545	Lepisosteus_oculatus
ENSPREG00000015515	snrpb	62	90.370	ENSLAFG00000017588	SNRPB	82	73.158	Loxodonta_africana
ENSPREG00000015515	snrpb	62	95.556	ENSMFAG00000038756	SNRPB	82	76.842	Macaca_fascicularis
ENSPREG00000015515	snrpb	96	62.338	ENSMMUG00000010050	SNRPB	82	76.842	Macaca_mulatta
ENSPREG00000015515	snrpb	62	95.556	ENSMNEG00000027954	SNRPB	82	76.842	Macaca_nemestrina
ENSPREG00000015515	snrpb	62	95.556	ENSMLEG00000022346	SNRPB	82	76.842	Mandrillus_leucophaeus
ENSPREG00000015515	snrpb	62	100.000	ENSMAMG00000009294	snrpb	87	80.841	Mastacembelus_armatus
ENSPREG00000015515	snrpb	62	100.000	ENSMZEG00005011856	snrpb	89	80.841	Maylandia_zebra
ENSPREG00000015515	snrpb	62	95.556	ENSMICG00000016519	SNRPB	82	76.842	Microcebus_murinus
ENSPREG00000015515	snrpb	62	84.444	ENSMICG00000015983	-	62	84.444	Microcebus_murinus
ENSPREG00000015515	snrpb	62	94.815	ENSMOCG00000002892	-	82	76.316	Microtus_ochrogaster
ENSPREG00000015515	snrpb	62	100.000	ENSMMOG00000013226	snrpb	80	80.749	Mola_mola
ENSPREG00000015515	snrpb	62	99.259	ENSMALG00000020839	snrpb	72	77.570	Monopterus_albus
ENSPREG00000015515	snrpb	62	95.556	MGP_CAROLIEiJ_G0024293	Snrpb	66	97.826	Mus_caroli
ENSPREG00000015515	snrpb	62	95.556	ENSMUSG00000027404	Snrpb	66	97.826	Mus_musculus
ENSPREG00000015515	snrpb	62	95.556	MGP_PahariEiJ_G0025738	Snrpb	66	97.826	Mus_pahari
ENSPREG00000015515	snrpb	62	95.556	MGP_SPRETEiJ_G0025213	Snrpb	65	97.826	Mus_spretus
ENSPREG00000015515	snrpb	62	95.556	ENSMPUG00000009283	SNRPB	82	76.842	Mustela_putorius_furo
ENSPREG00000015515	snrpb	62	95.556	ENSNGAG00000012051	Snrpb	82	76.842	Nannospalax_galili
ENSPREG00000015515	snrpb	62	100.000	ENSNBRG00000006353	snrpb	82	78.505	Neolamprologus_brichardi
ENSPREG00000015515	snrpb	62	95.556	ENSNLEG00000029067	SNRPB	80	76.842	Nomascus_leucogenys
ENSPREG00000015515	snrpb	62	95.556	ENSMEUG00000015625	SNRPB	84	76.316	Notamacropus_eugenii
ENSPREG00000015515	snrpb	62	95.556	ENSODEG00000004305	-	82	76.842	Octodon_degus
ENSPREG00000015515	snrpb	62	88.889	ENSODEG00000016060	-	80	72.105	Octodon_degus
ENSPREG00000015515	snrpb	62	100.000	ENSONIG00000000248	snrpb	89	80.841	Oreochromis_niloticus
ENSPREG00000015515	snrpb	62	64.444	ENSOCUG00000026813	-	58	64.444	Oryctolagus_cuniculus
ENSPREG00000015515	snrpb	92	67.157	ENSOCUG00000022423	-	69	91.111	Oryctolagus_cuniculus
ENSPREG00000015515	snrpb	88	72.038	ENSOCUG00000021456	-	79	73.158	Oryctolagus_cuniculus
ENSPREG00000015515	snrpb	63	99.265	ENSORLG00000021862	snrpb	56	100.000	Oryzias_latipes
ENSPREG00000015515	snrpb	62	95.556	ENSOARG00000006740	SNRPB	82	76.842	Ovis_aries
ENSPREG00000015515	snrpb	62	95.556	ENSPPAG00000036314	SNRPB	82	76.842	Pan_paniscus
ENSPREG00000015515	snrpb	62	95.556	ENSPPRG00000003233	-	82	76.842	Panthera_pardus
ENSPREG00000015515	snrpb	62	95.556	ENSPTIG00000007468	SNRPB	82	76.842	Panthera_tigris_altaica
ENSPREG00000015515	snrpb	62	95.556	ENSPTRG00000013176	SNRPB	82	76.842	Pan_troglodytes
ENSPREG00000015515	snrpb	62	95.556	ENSPANG00000020362	SNRPB	73	76.842	Papio_anubis
ENSPREG00000015515	snrpb	62	95.556	ENSPEMG00000007948	Snrpb	82	76.842	Peromyscus_maniculatus_bairdii
ENSPREG00000015515	snrpb	73	87.283	ENSPFOG00000011802	snrpb	72	85.882	Poecilia_formosa
ENSPREG00000015515	snrpb	74	87.861	ENSPLAG00000014130	snrpb	74	87.647	Poecilia_latipinna
ENSPREG00000015515	snrpb	62	95.556	ENSPPYG00000010841	SNRPB	82	76.842	Pongo_abelii
ENSPREG00000015515	snrpb	62	95.556	ENSPCOG00000013686	SNRPB	82	76.842	Propithecus_coquereli
ENSPREG00000015515	snrpb	62	94.074	ENSPVAG00000017013	SNRPB	66	75.789	Pteropus_vampyrus
ENSPREG00000015515	snrpb	62	100.000	ENSPNYG00000014788	snrpb	89	80.841	Pundamilia_nyererei
ENSPREG00000015515	snrpb	63	98.529	ENSPNAG00000016126	snrpb	78	79.894	Pygocentrus_nattereri
ENSPREG00000015515	snrpb	62	95.556	ENSRNOG00000006961	Snrpb	65	97.826	Rattus_norvegicus
ENSPREG00000015515	snrpb	62	95.556	ENSRBIG00000040505	SNRPB	82	77.249	Rhinopithecus_bieti
ENSPREG00000015515	snrpb	62	95.556	ENSRROG00000036094	SNRPB	82	76.842	Rhinopithecus_roxellana
ENSPREG00000015515	snrpb	62	95.556	ENSSBOG00000027310	SNRPB	82	76.842	Saimiri_boliviensis_boliviensis
ENSPREG00000015515	snrpb	62	100.000	ENSSMAG00000006766	snrpb	89	74.057	Scophthalmus_maximus
ENSPREG00000015515	snrpb	62	100.000	ENSSDUG00000018539	snrpb	89	80.841	Seriola_dumerili
ENSPREG00000015515	snrpb	62	100.000	ENSSLDG00000022391	snrpb	89	80.841	Seriola_lalandi_dorsalis
ENSPREG00000015515	snrpb	62	76.296	ENSSARG00000003084	SNRPB	81	63.158	Sorex_araneus
ENSPREG00000015515	snrpb	62	100.000	ENSSPAG00000021992	snrpb	89	80.841	Stegastes_partitus
ENSPREG00000015515	snrpb	62	71.111	ENSSSCG00000011966	-	54	68.889	Sus_scrofa
ENSPREG00000015515	snrpb	62	95.556	ENSSSCG00000040857	-	82	76.842	Sus_scrofa
ENSPREG00000015515	snrpb	71	85.987	ENSTGUG00000005684	SNRPB	56	97.037	Taeniopygia_guttata
ENSPREG00000015515	snrpb	62	100.000	ENSTRUG00000023094	snrpb	82	80.749	Takifugu_rubripes
ENSPREG00000015515	snrpb	62	100.000	ENSTNIG00000002991	snrpb	89	71.698	Tetraodon_nigroviridis
ENSPREG00000015515	snrpb	62	95.556	ENSUAMG00000005984	-	65	95.556	Ursus_americanus
ENSPREG00000015515	snrpb	62	95.556	ENSUMAG00000002123	-	62	95.556	Ursus_maritimus
ENSPREG00000015515	snrpb	62	74.815	ENSVVUG00000010086	-	55	74.815	Vulpes_vulpes
ENSPREG00000015515	snrpb	62	98.519	ENSXETG00000027266	snrpb	57	98.519	Xenopus_tropicalis
ENSPREG00000015515	snrpb	74	85.549	ENSXMAG00000028767	snrpb	73	85.882	Xiphophorus_maculatus