EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000015589 (Gene tree)
Gene ID: 103459673
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 10881 bases
Position: chrLG23:15853021-15863901
Accession: 103459673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000023128	RRM_1	PF00076.22	5.3e-05	1	1
ENSPREP00000023107	RRM_1	PF00076.22	6e-05	1	1
ENSPREP00000023128	G-patch	PF01585.23	4.4e-13	1	1
ENSPREP00000023107	G-patch	PF01585.23	4.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000023368	-	1179	-	ENSPREP00000023128	392 (aa)	-	-
ENSPRET00000023345	-	1318	XM_008401444	ENSPREP00000023107	419 (aa)	XP_008399666	UPI0004A229B8

Gene Model

Click here to download ENSPREG00000015589's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000015589's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000015589	rbm17	100	77.830	ENSG00000134453	RBM17	100	77.150	Homo_sapiens
ENSPREG00000015589	rbm17	99	93.285	ENSAPOG00000007101	rbm17	99	93.285	Acanthochromis_polyacanthus
ENSPREG00000015589	rbm17	100	78.066	ENSAMEG00000002107	RBM17	100	77.396	Ailuropoda_melanoleuca
ENSPREG00000015589	rbm17	100	89.383	ENSACIG00000006251	rbm17	100	89.383	Amphilophus_citrinellus
ENSPREG00000015589	rbm17	100	93.112	ENSAOCG00000014892	rbm17	100	93.112	Amphiprion_ocellaris
ENSPREG00000015589	rbm17	100	93.112	ENSAPEG00000022779	rbm17	100	93.112	Amphiprion_percula
ENSPREG00000015589	rbm17	100	92.162	ENSATEG00000004406	rbm17	100	92.162	Anabas_testudineus
ENSPREG00000015589	rbm17	100	77.830	ENSAPLG00000004190	RBM17	100	77.830	Anas_platyrhynchos
ENSPREG00000015589	rbm17	90	76.350	ENSACAG00000005418	RBM17	99	76.350	Anolis_carolinensis
ENSPREG00000015589	rbm17	100	70.545	ENSANAG00000019330	-	95	85.345	Aotus_nancymaae
ENSPREG00000015589	rbm17	100	79.901	ENSANAG00000030127	RBM17	98	86.066	Aotus_nancymaae
ENSPREG00000015589	rbm17	100	90.176	ENSACLG00000003928	rbm17	100	90.176	Astatotilapia_calliptera
ENSPREG00000015589	rbm17	100	85.273	ENSAMXG00000005853	rbm17	100	85.273	Astyanax_mexicanus
ENSPREG00000015589	rbm17	100	77.594	ENSBTAG00000021951	RBM17	100	76.904	Bos_taurus
ENSPREG00000015589	rbm17	100	76.415	ENSBTAG00000011094	-	100	75.708	Bos_taurus
ENSPREG00000015589	rbm17	74	33.746	WBGene00010233	F58B3.7	91	31.873	Caenorhabditis_elegans
ENSPREG00000015589	rbm17	100	80.000	ENSCJAG00000020573	RBM17	100	80.000	Callithrix_jacchus
ENSPREG00000015589	rbm17	100	78.066	ENSCAFG00000005206	RBM17	100	77.396	Canis_familiaris
ENSPREG00000015589	rbm17	100	79.644	ENSCAFG00020005420	RBM17	100	79.644	Canis_lupus_dingo
ENSPREG00000015589	rbm17	100	80.153	ENSCHIG00000023204	-	100	79.389	Capra_hircus
ENSPREG00000015589	rbm17	100	75.472	ENSCHIG00000019921	-	100	74.764	Capra_hircus
ENSPREG00000015589	rbm17	100	78.066	ENSTSYG00000001165	RBM17	99	88.136	Carlito_syrichta
ENSPREG00000015589	rbm17	90	68.908	ENSCAPG00000006275	RBM17	100	68.908	Cavia_aperea
ENSPREG00000015589	rbm17	100	79.798	ENSCPOG00000005679	RBM17	99	79.040	Cavia_porcellus
ENSPREG00000015589	rbm17	100	78.302	ENSCCAG00000018655	RBM17	98	86.066	Cebus_capucinus
ENSPREG00000015589	rbm17	100	80.407	ENSCATG00000041566	RBM17	97	87.500	Cercocebus_atys
ENSPREG00000015589	rbm17	100	78.066	ENSCLAG00000012195	RBM17	99	77.358	Chinchilla_lanigera
ENSPREG00000015589	rbm17	100	77.830	ENSCSAG00000013564	RBM17	100	77.150	Chlorocebus_sabaeus
ENSPREG00000015589	rbm17	93	61.323	ENSCHOG00000005131	RBM17	100	60.560	Choloepus_hoffmanni
ENSPREG00000015589	rbm17	100	79.009	ENSCPBG00000019836	RBM17	100	79.009	Chrysemys_picta_bellii
ENSPREG00000015589	rbm17	100	45.070	ENSCSAVG00000008782	-	100	42.723	Ciona_savignyi
ENSPREG00000015589	rbm17	97	72.775	ENSCANG00000023715	-	99	72.656	Colobus_angolensis_palliatus
ENSPREG00000015589	rbm17	100	77.594	ENSCANG00000030987	RBM17	97	87.500	Colobus_angolensis_palliatus
ENSPREG00000015589	rbm17	100	65.823	ENSCGRG00001009256	-	100	61.042	Cricetulus_griseus_chok1gshd
ENSPREG00000015589	rbm17	100	78.302	ENSCGRG00001013842	Rbm17	100	77.594	Cricetulus_griseus_chok1gshd
ENSPREG00000015589	rbm17	100	78.302	ENSCGRG00000006907	Rbm17	100	77.594	Cricetulus_griseus_crigri
ENSPREG00000015589	rbm17	100	87.204	ENSCSEG00000018164	rbm17	100	87.204	Cynoglossus_semilaevis
ENSPREG00000015589	rbm17	100	90.609	ENSCVAG00000002476	rbm17	100	90.609	Cyprinodon_variegatus
ENSPREG00000015589	rbm17	100	77.069	ENSDARG00000031346	rbm17	100	79.905	Danio_rerio
ENSPREG00000015589	rbm17	100	77.830	ENSDNOG00000035920	RBM17	100	77.150	Dasypus_novemcinctus
ENSPREG00000015589	rbm17	99	37.615	FBgn0086683	Spf45	61	50.000	Drosophila_melanogaster
ENSPREG00000015589	rbm17	88	83.810	ENSETEG00000006642	RBM17	84	83.810	Echinops_telfairi
ENSPREG00000015589	rbm17	67	69.048	ENSEBUG00000010253	rbm17	88	69.048	Eptatretus_burgeri
ENSPREG00000015589	rbm17	93	75.064	ENSEASG00005009236	-	100	75.532	Equus_asinus_asinus
ENSPREG00000015589	rbm17	100	79.597	ENSEASG00005019205	-	100	78.841	Equus_asinus_asinus
ENSPREG00000015589	rbm17	100	68.868	ENSECAG00000001379	-	100	68.868	Equus_caballus
ENSPREG00000015589	rbm17	100	71.756	ENSECAG00000008939	RBM17	100	72.265	Equus_caballus
ENSPREG00000015589	rbm17	86	60.763	ENSEEUG00000013077	RBM17	100	59.946	Erinaceus_europaeus
ENSPREG00000015589	rbm17	100	86.014	ENSELUG00000006440	rbm17	100	86.014	Esox_lucius
ENSPREG00000015589	rbm17	100	78.066	ENSFCAG00000031988	RBM17	100	77.396	Felis_catus
ENSPREG00000015589	rbm17	100	77.123	ENSFALG00000001790	RBM17	100	77.150	Ficedula_albicollis
ENSPREG00000015589	rbm17	100	78.066	ENSFDAG00000007470	RBM17	100	77.358	Fukomys_damarensis
ENSPREG00000015589	rbm17	100	94.774	ENSFHEG00000001266	rbm17	100	93.893	Fundulus_heteroclitus
ENSPREG00000015589	rbm17	99	80.861	ENSGMOG00000008438	rbm17	100	79.665	Gadus_morhua
ENSPREG00000015589	rbm17	100	77.830	ENSGALG00000006332	RBM17	100	77.887	Gallus_gallus
ENSPREG00000015589	rbm17	100	97.208	ENSGAFG00000019879	rbm17	100	97.208	Gambusia_affinis
ENSPREG00000015589	rbm17	99	88.571	ENSGACG00000019174	rbm17	99	88.571	Gasterosteus_aculeatus
ENSPREG00000015589	rbm17	100	79.009	ENSGAGG00000019906	RBM17	100	79.009	Gopherus_agassizii
ENSPREG00000015589	rbm17	100	91.905	ENSHBUG00000016624	rbm17	100	91.905	Haplochromis_burtoni
ENSPREG00000015589	rbm17	100	78.066	ENSHGLG00000011580	RBM17	100	77.358	Heterocephalus_glaber_female
ENSPREG00000015589	rbm17	100	66.076	ENSHGLG00100010556	-	100	63.291	Heterocephalus_glaber_male
ENSPREG00000015589	rbm17	100	78.066	ENSHGLG00100010460	RBM17	100	77.358	Heterocephalus_glaber_male
ENSPREG00000015589	rbm17	99	88.067	ENSHCOG00000010865	rbm17	100	88.067	Hippocampus_comes
ENSPREG00000015589	rbm17	100	81.368	ENSIPUG00000007699	Rbm17	100	80.750	Ictalurus_punctatus
ENSPREG00000015589	rbm17	100	78.302	ENSSTOG00000013591	RBM17	100	77.594	Ictidomys_tridecemlineatus
ENSPREG00000015589	rbm17	100	57.075	ENSJJAG00000000993	-	100	56.604	Jaculus_jaculus
ENSPREG00000015589	rbm17	100	78.302	ENSJJAG00000022886	Rbm17	100	77.594	Jaculus_jaculus
ENSPREG00000015589	rbm17	100	92.637	ENSKMAG00000021400	rbm17	100	92.637	Kryptolebias_marmoratus
ENSPREG00000015589	rbm17	100	90.261	ENSLBEG00000000881	rbm17	100	90.261	Labrus_bergylta
ENSPREG00000015589	rbm17	99	66.121	ENSLACG00000017297	RBM17	99	66.282	Latimeria_chalumnae
ENSPREG00000015589	rbm17	100	80.653	ENSLOCG00000015659	rbm17	100	79.720	Lepisosteus_oculatus
ENSPREG00000015589	rbm17	100	78.066	ENSLAFG00000011629	RBM17	100	77.358	Loxodonta_africana
ENSPREG00000015589	rbm17	100	80.407	ENSMFAG00000035521	RBM17	97	87.500	Macaca_fascicularis
ENSPREG00000015589	rbm17	100	77.830	ENSMMUG00000015152	RBM17	97	87.500	Macaca_mulatta
ENSPREG00000015589	rbm17	100	80.407	ENSMNEG00000017264	RBM17	97	87.500	Macaca_nemestrina
ENSPREG00000015589	rbm17	100	80.407	ENSMLEG00000029340	RBM17	97	87.500	Mandrillus_leucophaeus
ENSPREG00000015589	rbm17	100	90.499	ENSMAMG00000000387	rbm17	100	90.974	Mastacembelus_armatus
ENSPREG00000015589	rbm17	100	91.905	ENSMZEG00005015179	rbm17	100	91.905	Maylandia_zebra
ENSPREG00000015589	rbm17	100	77.465	ENSMGAG00000003981	RBM17	100	77.465	Meleagris_gallopavo
ENSPREG00000015589	rbm17	100	78.302	ENSMAUG00000019247	Rbm17	100	77.594	Mesocricetus_auratus
ENSPREG00000015589	rbm17	100	78.803	ENSMICG00000003976	-	100	78.803	Microcebus_murinus
ENSPREG00000015589	rbm17	100	73.176	ENSMICG00000041489	-	100	73.176	Microcebus_murinus
ENSPREG00000015589	rbm17	92	64.000	ENSMOCG00000014517	-	99	63.636	Microtus_ochrogaster
ENSPREG00000015589	rbm17	100	78.302	ENSMOCG00000011847	Rbm17	100	77.594	Microtus_ochrogaster
ENSPREG00000015589	rbm17	100	83.415	ENSMMOG00000010264	rbm17	100	83.415	Mola_mola
ENSPREG00000015589	rbm17	100	78.066	ENSMODG00000016648	RBM17	100	77.396	Monodelphis_domestica
ENSPREG00000015589	rbm17	100	90.521	ENSMALG00000010597	rbm17	100	91.706	Monopterus_albus
ENSPREG00000015589	rbm17	100	78.538	MGP_CAROLIEiJ_G0023173	Rbm17	100	77.830	Mus_caroli
ENSPREG00000015589	rbm17	100	78.538	ENSMUSG00000037197	Rbm17	100	77.830	Mus_musculus
ENSPREG00000015589	rbm17	100	78.538	MGP_PahariEiJ_G0019233	Rbm17	100	77.830	Mus_pahari
ENSPREG00000015589	rbm17	100	78.538	MGP_SPRETEiJ_G0024091	Rbm17	100	77.830	Mus_spretus
ENSPREG00000015589	rbm17	86	75.749	ENSMPUG00000016359	RBM17	96	75.749	Mustela_putorius_furo
ENSPREG00000015589	rbm17	100	76.471	ENSMLUG00000002302	-	100	75.765	Myotis_lucifugus
ENSPREG00000015589	rbm17	100	73.585	ENSMLUG00000025709	-	100	73.113	Myotis_lucifugus
ENSPREG00000015589	rbm17	100	57.506	ENSNGAG00000000663	-	100	57.252	Nannospalax_galili
ENSPREG00000015589	rbm17	100	78.302	ENSNGAG00000000741	Rbm17	100	77.594	Nannospalax_galili
ENSPREG00000015589	rbm17	100	88.265	ENSNBRG00000018148	rbm17	100	88.265	Neolamprologus_brichardi
ENSPREG00000015589	rbm17	100	78.500	ENSNLEG00000033350	RBM17	98	86.066	Nomascus_leucogenys
ENSPREG00000015589	rbm17	100	73.113	ENSMEUG00000011347	RBM17	100	72.406	Notamacropus_eugenii
ENSPREG00000015589	rbm17	100	67.488	ENSOPRG00000002993	RBM17	100	67.488	Ochotona_princeps
ENSPREG00000015589	rbm17	97	60.465	ENSODEG00000007286	-	99	58.869	Octodon_degus
ENSPREG00000015589	rbm17	100	78.118	ENSODEG00000004393	RBM17	100	77.412	Octodon_degus
ENSPREG00000015589	rbm17	100	89.762	ENSONIG00000011838	rbm17	100	89.762	Oreochromis_niloticus
ENSPREG00000015589	rbm17	100	77.594	ENSOANG00000015455	RBM17	100	77.561	Ornithorhynchus_anatinus
ENSPREG00000015589	rbm17	100	91.449	ENSORLG00000028798	rbm17	100	91.449	Oryzias_latipes
ENSPREG00000015589	rbm17	100	91.449	ENSORLG00020004593	rbm17	100	90.561	Oryzias_latipes_hni
ENSPREG00000015589	rbm17	100	91.686	ENSORLG00015000033	rbm17	99	91.686	Oryzias_latipes_hsok
ENSPREG00000015589	rbm17	100	92.162	ENSOMEG00000012060	rbm17	100	93.125	Oryzias_melastigma
ENSPREG00000015589	rbm17	100	78.302	ENSOGAG00000015687	RBM17	100	77.594	Otolemur_garnettii
ENSPREG00000015589	rbm17	100	77.594	ENSOARG00000012975	RBM17	100	76.904	Ovis_aries
ENSPREG00000015589	rbm17	100	77.830	ENSPPAG00000032347	RBM17	98	86.066	Pan_paniscus
ENSPREG00000015589	rbm17	100	78.066	ENSPPRG00000010706	RBM17	100	77.396	Panthera_pardus
ENSPREG00000015589	rbm17	100	78.066	ENSPTIG00000007596	RBM17	100	77.396	Panthera_tigris_altaica
ENSPREG00000015589	rbm17	100	77.830	ENSPTRG00000002265	RBM17	98	86.066	Pan_troglodytes
ENSPREG00000015589	rbm17	100	80.407	ENSPANG00000023425	RBM17	97	87.500	Papio_anubis
ENSPREG00000015589	rbm17	100	80.986	ENSPKIG00000025526	rbm17	100	78.923	Paramormyrops_kingsleyae
ENSPREG00000015589	rbm17	100	77.354	ENSPKIG00000005048	-	100	77.354	Paramormyrops_kingsleyae
ENSPREG00000015589	rbm17	100	77.518	ENSPSIG00000012332	RBM17	100	77.561	Pelodiscus_sinensis
ENSPREG00000015589	rbm17	100	84.750	ENSPMGG00000007980	rbm17	100	84.750	Periophthalmus_magnuspinnatus
ENSPREG00000015589	rbm17	100	78.302	ENSPEMG00000014320	Rbm17	100	77.594	Peromyscus_maniculatus_bairdii
ENSPREG00000015589	rbm17	100	77.700	ENSPCIG00000019260	-	100	77.017	Phascolarctos_cinereus
ENSPREG00000015589	rbm17	100	98.337	ENSPFOG00000013271	rbm17	100	98.337	Poecilia_formosa
ENSPREG00000015589	rbm17	100	97.862	ENSPLAG00000004455	rbm17	100	97.862	Poecilia_latipinna
ENSPREG00000015589	rbm17	100	98.337	ENSPMEG00000014864	rbm17	100	98.337	Poecilia_mexicana
ENSPREG00000015589	rbm17	100	77.830	ENSPPYG00000002067	RBM17	100	77.150	Pongo_abelii
ENSPREG00000015589	rbm17	80	57.453	ENSPPYG00000019042	-	100	55.692	Pongo_abelii
ENSPREG00000015589	rbm17	99	59.601	ENSPPYG00000019881	-	100	58.294	Pongo_abelii
ENSPREG00000015589	rbm17	100	70.755	ENSPCAG00000016879	RBM17	100	70.047	Procavia_capensis
ENSPREG00000015589	rbm17	100	79.747	ENSPCOG00000027881	RBM17	100	79.747	Propithecus_coquereli
ENSPREG00000015589	rbm17	100	69.951	ENSPVAG00000015499	RBM17	100	69.438	Pteropus_vampyrus
ENSPREG00000015589	rbm17	100	83.418	ENSPNYG00000015274	rbm17	100	83.038	Pundamilia_nyererei
ENSPREG00000015589	rbm17	100	85.273	ENSPNAG00000030046	rbm17	100	85.273	Pygocentrus_nattereri
ENSPREG00000015589	rbm17	100	78.302	ENSRNOG00000018767	Rbm17	100	77.594	Rattus_norvegicus
ENSPREG00000015589	rbm17	100	77.830	ENSRBIG00000043727	RBM17	97	87.500	Rhinopithecus_bieti
ENSPREG00000015589	rbm17	100	80.407	ENSRROG00000044142	RBM17	97	87.500	Rhinopithecus_roxellana
ENSPREG00000015589	rbm17	100	79.747	ENSSBOG00000031661	-	92	89.474	Saimiri_boliviensis_boliviensis
ENSPREG00000015589	rbm17	100	69.575	ENSSBOG00000023653	-	100	65.734	Saimiri_boliviensis_boliviensis
ENSPREG00000015589	rbm17	100	78.774	ENSSHAG00000012480	-	100	78.066	Sarcophilus_harrisii
ENSPREG00000015589	rbm17	100	79.294	ENSSFOG00015009892	rbm17	100	79.294	Scleropages_formosus
ENSPREG00000015589	rbm17	100	88.010	ENSSMAG00000012368	rbm17	100	87.755	Scophthalmus_maximus
ENSPREG00000015589	rbm17	100	90.306	ENSSDUG00000015015	rbm17	100	90.306	Seriola_dumerili
ENSPREG00000015589	rbm17	100	90.306	ENSSLDG00000014486	rbm17	100	90.306	Seriola_lalandi_dorsalis
ENSPREG00000015589	rbm17	50	76.364	ENSSARG00000001792	-	79	76.364	Sorex_araneus
ENSPREG00000015589	rbm17	99	78.487	ENSSPUG00000001036	RBM17	99	77.833	Sphenodon_punctatus
ENSPREG00000015589	rbm17	100	92.874	ENSSPAG00000002338	rbm17	100	92.874	Stegastes_partitus
ENSPREG00000015589	rbm17	100	77.594	ENSSSCG00000011134	RBM17	100	76.904	Sus_scrofa
ENSPREG00000015589	rbm17	100	77.594	ENSTGUG00000002013	RBM17	100	77.594	Taeniopygia_guttata
ENSPREG00000015589	rbm17	100	89.311	ENSTRUG00000010698	rbm17	100	89.311	Takifugu_rubripes
ENSPREG00000015589	rbm17	100	88.836	ENSTNIG00000006892	rbm17	100	88.836	Tetraodon_nigroviridis
ENSPREG00000015589	rbm17	100	62.716	ENSTBEG00000014686	RBM17	100	62.716	Tupaia_belangeri
ENSPREG00000015589	rbm17	90	76.240	ENSTTRG00000001344	RBM17	100	76.240	Tursiops_truncatus
ENSPREG00000015589	rbm17	100	79.545	ENSUAMG00000009499	RBM17	100	79.545	Ursus_americanus
ENSPREG00000015589	rbm17	100	80.662	ENSUMAG00000012237	RBM17	100	79.898	Ursus_maritimus
ENSPREG00000015589	rbm17	100	67.241	ENSVPAG00000005497	RBM17	84	83.594	Vicugna_pacos
ENSPREG00000015589	rbm17	100	79.644	ENSVVUG00000006780	RBM17	100	79.644	Vulpes_vulpes
ENSPREG00000015589	rbm17	99	74.505	ENSXETG00000018123	rbm17	100	74.257	Xenopus_tropicalis
ENSPREG00000015589	rbm17	100	97.613	ENSXMAG00000008674	rbm17	100	97.613	Xiphophorus_maculatus