EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000015596 (Gene tree)
Gene ID: -
Gene Symbol: ddx27
Alias: -
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 7991 bases
Position: chrKK215297.1:122232-130222
Accession: ZDB-GENE-031001-8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000023111	ResIII	PF04851.15	2.1e-06	1	1
ENSPREP00000023135	ResIII	PF04851.15	2.6e-05	1	1
ENSPREP00000023111	DEAD	PF00270.29	3.7e-39	1	1
ENSPREP00000023135	DEAD	PF00270.29	7.5e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000023349	-	1023	-	ENSPREP00000023111	340 (aa)	-	-
ENSPRET00000023373	-	531	-	ENSPREP00000023135	176 (aa)	-	-

Gene Model

Click here to download ENSPREG00000015596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000015596's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000015596	ddx27	99	33.858	ENSPREG00000017840	ddx4	60	33.858
ENSPREG00000015596	ddx27	90	36.875	ENSPREG00000018914	DDX5	51	31.195
ENSPREG00000015596	ddx27	99	35.000	ENSPREG00000020880	-	53	35.942
ENSPREG00000015596	ddx27	59	37.500	ENSPREG00000008948	-	51	37.500
ENSPREG00000015596	ddx27	93	36.310	ENSPREG00000006472	eif4a2	76	31.056
ENSPREG00000015596	ddx27	91	34.969	ENSPREG00000015413	ddx5	61	30.887
ENSPREG00000015596	ddx27	88	34.615	ENSPREG00000003519	eif4a1b	81	30.094
ENSPREG00000015596	ddx27	87	45.098	ENSPREG00000011214	ddx49	65	37.580
ENSPREG00000015596	ddx27	61	36.530	ENSPREG00000008894	ddx18	70	36.073
ENSPREG00000015596	ddx27	89	43.590	ENSPREG00000015560	ddx47	62	37.374
ENSPREG00000015596	ddx27	89	36.709	ENSPREG00000000506	si:dkey-156n14.5	50	32.317
ENSPREG00000015596	ddx27	89	34.706	ENSPREG00000005321	DDX41	51	31.348
ENSPREG00000015596	ddx27	90	30.887	ENSPREG00000017406	ddx39aa	75	30.275
ENSPREG00000015596	ddx27	90	32.424	ENSPREG00000007774	ddx59	52	32.121

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000015596	ddx27	93	82.927	ENSG00000124228	DDX27	59	82.822	Homo_sapiens
ENSPREG00000015596	ddx27	93	92.073	ENSACIG00000014378	ddx27	78	90.323	Amphilophus_citrinellus
ENSPREG00000015596	ddx27	91	69.375	ENSCSAVG00000006949	-	64	61.489	Ciona_savignyi
ENSPREG00000015596	ddx27	93	78.049	ENSEBUG00000004326	ddx27	50	73.602	Eptatretus_burgeri
ENSPREG00000015596	ddx27	94	87.059	ENSFHEG00000006419	ddx27	96	87.059	Fundulus_heteroclitus
ENSPREG00000015596	ddx27	93	82.927	ENSGGOG00000015474	-	51	69.538	Gorilla_gorilla
ENSPREG00000015596	ddx27	84	87.179	ENSHCOG00000015489	-	92	87.179	Hippocampus_comes
ENSPREG00000015596	ddx27	84	89.189	ENSNBRG00000006206	ddx27	74	71.835	Neolamprologus_brichardi
ENSPREG00000015596	ddx27	94	81.212	ENSPCIG00000008052	DDX27	57	71.827	Phascolarctos_cinereus
ENSPREG00000015596	ddx27	86	82.143	ENSPMEG00000005563	ddx27	60	81.818	Poecilia_mexicana
ENSPREG00000015596	ddx27	93	93.293	ENSPNYG00000014670	ddx27	72	97.674	Pundamilia_nyererei