EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000015599 (Gene tree)
Gene ID: 103479360
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 7589 bases
Position: chrLG17:12925654-12933242
Accession: 103479360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000023113	PRP38	PF03371.15	2e-55	1	1
ENSPREP00000023129	PRP38	PF03371.15	6.1e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000023351	-	4201	XM_008433736	ENSPREP00000023113	463 (aa)	XP_008431958	UPI0004A31110
ENSPRET00000023367	-	4984	-	ENSPREP00000023129	184 (aa)	-	-

Gene Model

Click here to download ENSPREG00000015599's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000015599's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000015599	-	90	95.152	ENSACIG00000016459	-	96	95.152	Amphilophus_citrinellus
ENSPREG00000015599	-	100	84.301	ENSATEG00000014482	-	100	82.581	Anabas_testudineus
ENSPREG00000015599	-	83	93.464	ENSAMXG00000039494	-	50	84.880	Astyanax_mexicanus
ENSPREG00000015599	-	83	92.208	ENSBTAG00000047874	PRPF38B	85	61.088	Bos_taurus
ENSPREG00000015599	-	79	54.795	WBGene00022434	Y108G3AL.2	61	53.266	Caenorhabditis_elegans
ENSPREG00000015599	-	73	92.647	ENSCAFG00020010992	-	91	56.863	Canis_lupus_dingo
ENSPREG00000015599	-	83	92.208	ENSCHIG00000024357	-	85	61.088	Capra_hircus
ENSPREG00000015599	-	80	95.238	ENSCPOG00000039545	-	82	62.366	Cavia_porcellus
ENSPREG00000015599	-	80	95.238	ENSCLAG00000005801	-	82	61.966	Chinchilla_lanigera
ENSPREG00000015599	-	63	93.103	ENSCHOG00000008972	-	98	60.057	Choloepus_hoffmanni
ENSPREG00000015599	-	86	90.000	ENSCPBG00000028299	-	83	63.482	Chrysemys_picta_bellii
ENSPREG00000015599	-	79	74.483	ENSCSAVG00000009443	-	71	74.479	Ciona_savignyi
ENSPREG00000015599	-	89	95.122	ENSCSEG00000015030	-	100	76.989	Cynoglossus_semilaevis
ENSPREG00000015599	-	99	98.361	ENSCVAG00000005543	-	88	98.361	Cyprinodon_variegatus
ENSPREG00000015599	-	85	71.154	FBgn0030468	CG1622	89	75.316	Drosophila_melanogaster
ENSPREG00000015599	-	79	93.151	ENSETEG00000014690	-	85	67.268	Echinops_telfairi
ENSPREG00000015599	-	89	88.757	ENSELUG00000010390	-	97	69.098	Esox_lucius
ENSPREG00000015599	-	52	93.684	ENSFALG00000002673	-	86	56.532	Ficedula_albicollis
ENSPREG00000015599	-	89	90.854	ENSGMOG00000012080	-	99	75.210	Gadus_morhua
ENSPREG00000015599	-	86	90.506	ENSGALG00000001972	-	92	60.827	Gallus_gallus
ENSPREG00000015599	-	100	98.056	ENSGAFG00000008943	-	100	98.056	Gambusia_affinis
ENSPREG00000015599	-	86	90.000	ENSGAGG00000001563	-	83	63.482	Gopherus_agassizii
ENSPREG00000015599	-	80	95.238	ENSHGLG00000016583	PRPF38B	82	62.260	Heterocephalus_glaber_female
ENSPREG00000015599	-	80	95.238	ENSHGLG00100015525	-	82	61.834	Heterocephalus_glaber_male
ENSPREG00000015599	-	89	91.463	ENSHCOG00000001071	-	100	78.233	Hippocampus_comes
ENSPREG00000015599	-	89	95.732	ENSKMAG00000005540	-	100	81.607	Kryptolebias_marmoratus
ENSPREG00000015599	-	80	93.878	ENSLACG00000015511	-	97	57.765	Latimeria_chalumnae
ENSPREG00000015599	-	83	92.810	ENSMOCG00000020285	-	71	69.767	Microtus_ochrogaster
ENSPREG00000015599	-	100	82.051	ENSMMOG00000011639	-	100	78.755	Mola_mola
ENSPREG00000015599	-	80	95.238	ENSMODG00000002350	-	87	84.672	Monodelphis_domestica
ENSPREG00000015599	-	100	86.111	ENSMALG00000019479	-	100	82.796	Monopterus_albus
ENSPREG00000015599	-	90	95.152	ENSNBRG00000019221	-	98	95.152	Neolamprologus_brichardi
ENSPREG00000015599	-	100	87.097	ENSONIG00000010129	-	100	84.516	Oreochromis_niloticus
ENSPREG00000015599	-	83	92.857	ENSOANG00000007343	-	66	81.944	Ornithorhynchus_anatinus
ENSPREG00000015599	-	94	97.688	ENSORLG00000015621	-	100	97.688	Oryzias_latipes
ENSPREG00000015599	-	95	97.701	ENSORLG00020016276	-	100	97.701	Oryzias_latipes_hni
ENSPREG00000015599	-	99	97.268	ENSORLG00015016270	-	89	97.268	Oryzias_latipes_hsok
ENSPREG00000015599	-	100	96.739	ENSOMEG00000022050	-	100	96.739	Oryzias_melastigma
ENSPREG00000015599	-	80	95.238	ENSOGAG00000027048	-	70	70.332	Otolemur_garnettii
ENSPREG00000015599	-	77	95.775	ENSOARG00000018899	-	82	62.418	Ovis_aries
ENSPREG00000015599	-	89	90.419	ENSPKIG00000017291	-	84	65.458	Paramormyrops_kingsleyae
ENSPREG00000015599	-	83	94.118	ENSPKIG00000004815	-	80	71.078	Paramormyrops_kingsleyae
ENSPREG00000015599	-	86	90.000	ENSPSIG00000016569	-	83	62.208	Pelodiscus_sinensis
ENSPREG00000015599	-	88	90.062	ENSPMGG00000017585	-	99	90.062	Periophthalmus_magnuspinnatus
ENSPREG00000015599	-	77	78.912	ENSPMAG00000007150	-	94	78.378	Petromyzon_marinus
ENSPREG00000015599	-	99	100.000	ENSPFOG00000004025	-	100	98.272	Poecilia_formosa
ENSPREG00000015599	-	100	98.056	ENSPLAG00000019842	-	100	98.056	Poecilia_latipinna
ENSPREG00000015599	-	100	98.056	ENSPMEG00000004807	-	97	98.056	Poecilia_mexicana
ENSPREG00000015599	-	83	92.810	ENSPNAG00000017484	-	95	67.284	Pygocentrus_nattereri
ENSPREG00000015599	-	80	95.238	ENSRNOG00000020438	Prpf38b	71	70.000	Rattus_norvegicus
ENSPREG00000015599	-	91	83.929	ENSSFOG00015004405	-	99	80.978	Scleropages_formosus
ENSPREG00000015599	-	98	87.363	ENSSFOG00015011251	-	95	87.363	Scleropages_formosus
ENSPREG00000015599	-	100	92.391	ENSSMAG00000001781	-	100	92.391	Scophthalmus_maximus
ENSPREG00000015599	-	100	94.022	ENSSDUG00000016574	-	100	94.022	Seriola_dumerili
ENSPREG00000015599	-	100	94.022	ENSSLDG00000023487	-	100	94.022	Seriola_lalandi_dorsalis
ENSPREG00000015599	-	85	90.506	ENSSPUG00000017742	-	91	62.103	Sphenodon_punctatus
ENSPREG00000015599	-	88	92.547	ENSTRUG00000011765	-	100	77.371	Takifugu_rubripes
ENSPREG00000015599	-	89	92.638	ENSTNIG00000015299	-	99	71.820	Tetraodon_nigroviridis
ENSPREG00000015599	-	80	78.231	ENSTBEG00000007504	-	87	56.926	Tupaia_belangeri
ENSPREG00000015599	-	80	95.238	ENSTTRG00000006479	-	85	60.879	Tursiops_truncatus
ENSPREG00000015599	-	78	69.930	ENSVPAG00000005541	-	81	54.367	Vicugna_pacos
ENSPREG00000015599	-	83	94.118	ENSXETG00000005260	prpf38b	78	66.998	Xenopus_tropicalis
ENSPREG00000015599	-	100	97.840	ENSXCOG00000008329	-	100	97.840	Xiphophorus_couchianus
ENSPREG00000015599	-	100	97.840	ENSXMAG00000023831	-	100	97.840	Xiphophorus_maculatus