EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000015673 (Gene tree)
Gene ID: 103482370
Gene Symbol: -
Alias: -
Full Name: ribosomal RNA processing protein 1 homolog B-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 12042 bases
Position: chrLG2:21378600-21390641
Accession: 103482370
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000023230	Nop52	PF05997.12	6.6e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000023468	-	2505	XM_008438495	ENSPREP00000023230	834 (aa)	XP_008436717	UPI0004A4832D

Gene Model

Click here to download ENSPREG00000015673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000015673's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000015673	-	59	47.287	ENSG00000160208	RRP1B	64	47.287	Homo_sapiens
ENSPREG00000015673	-	66	71.350	ENSAPOG00000007490	-	65	65.686	Acanthochromis_polyacanthus
ENSPREG00000015673	-	53	52.000	ENSAMEG00000011401	RRP1B	67	44.134	Ailuropoda_melanoleuca
ENSPREG00000015673	-	52	44.371	ENSAMEG00000011448	RRP1	81	47.733	Ailuropoda_melanoleuca
ENSPREG00000015673	-	66	64.524	ENSAOCG00000017894	-	100	69.372	Amphiprion_ocellaris
ENSPREG00000015673	-	72	64.524	ENSAPEG00000024150	-	65	66.422	Amphiprion_percula
ENSPREG00000015673	-	67	65.063	ENSATEG00000005045	-	65	57.515	Anabas_testudineus
ENSPREG00000015673	-	57	48.011	ENSAPLG00000004310	RRP1B	65	47.761	Anas_platyrhynchos
ENSPREG00000015673	-	58	51.124	ENSACAG00000017851	RRP1B	60	51.105	Anolis_carolinensis
ENSPREG00000015673	-	80	45.312	ENSANAG00000034889	RRP1B	91	45.312	Aotus_nancymaae
ENSPREG00000015673	-	68	46.457	ENSBTAG00000017418	RRP1B	72	46.457	Bos_taurus
ENSPREG00000015673	-	58	47.656	ENSCHIG00000021519	RRP1B	73	47.656	Capra_hircus
ENSPREG00000015673	-	53	53.763	ENSCPOG00000002396	RRP1B	73	43.935	Cavia_porcellus
ENSPREG00000015673	-	59	47.287	ENSCCAG00000029384	RRP1B	64	47.287	Cebus_capucinus
ENSPREG00000015673	-	59	46.154	ENSCATG00000017423	RRP1B	64	46.154	Cercocebus_atys
ENSPREG00000015673	-	55	46.923	ENSCLAG00000005622	RRP1B	74	46.923	Chinchilla_lanigera
ENSPREG00000015673	-	59	47.692	ENSCSAG00000007961	RRP1B	64	47.692	Chlorocebus_sabaeus
ENSPREG00000015673	-	62	51.524	ENSCPBG00000010310	RRP1B	70	47.696	Chrysemys_picta_bellii
ENSPREG00000015673	-	59	46.154	ENSCANG00000040952	RRP1B	64	46.154	Colobus_angolensis_palliatus
ENSPREG00000015673	-	79	45.736	ENSCGRG00001010889	-	68	45.736	Cricetulus_griseus_chok1gshd
ENSPREG00000015673	-	79	45.736	ENSCGRG00001023882	-	59	59.701	Cricetulus_griseus_chok1gshd
ENSPREG00000015673	-	75	45.736	ENSCGRG00000001553	Rrp1b	64	45.736	Cricetulus_griseus_crigri
ENSPREG00000015673	-	55	65.205	ENSCSEG00000020711	-	87	60.526	Cynoglossus_semilaevis
ENSPREG00000015673	-	59	54.023	ENSDARG00000103337	rrp1	68	51.872	Danio_rerio
ENSPREG00000015673	-	56	53.763	ENSETEG00000019489	RRP1B	61	54.839	Echinops_telfairi
ENSPREG00000015673	-	61	45.504	ENSEASG00005001687	RRP1B	65	45.504	Equus_asinus_asinus
ENSPREG00000015673	-	61	45.232	ENSECAG00000018018	RRP1B	65	45.232	Equus_caballus
ENSPREG00000015673	-	62	61.719	ENSELUG00000015885	-	91	59.854	Esox_lucius
ENSPREG00000015673	-	55	58.065	ENSFCAG00000010272	RRP1B	68	43.750	Felis_catus
ENSPREG00000015673	-	75	45.993	ENSFALG00000002024	RRP1B	61	46.254	Ficedula_albicollis
ENSPREG00000015673	-	55	44.776	ENSFDAG00000010899	RRP1B	63	44.776	Fukomys_damarensis
ENSPREG00000015673	-	51	44.270	ENSFDAG00000013728	RRP1	74	50.146	Fukomys_damarensis
ENSPREG00000015673	-	96	57.540	ENSFHEG00000016314	-	99	56.127	Fundulus_heteroclitus
ENSPREG00000015673	-	66	61.157	ENSGMOG00000001953	-	73	59.893	Gadus_morhua
ENSPREG00000015673	-	60	50.276	ENSGALG00000035696	RRP1B	68	50.276	Gallus_gallus
ENSPREG00000015673	-	92	64.474	ENSGACG00000001438	rrp1	99	64.660	Gasterosteus_aculeatus
ENSPREG00000015673	-	63	51.791	ENSGAGG00000000375	RRP1B	71	49.505	Gopherus_agassizii
ENSPREG00000015673	-	59	47.287	ENSGGOG00000012069	RRP1B	64	47.287	Gorilla_gorilla
ENSPREG00000015673	-	59	43.939	ENSHGLG00000004968	RRP1B	65	43.939	Heterocephalus_glaber_female
ENSPREG00000015673	-	51	43.939	ENSHGLG00100002232	RRP1B	56	43.939	Heterocephalus_glaber_male
ENSPREG00000015673	-	54	55.337	ENSIPUG00000000673	-	77	50.360	Ictalurus_punctatus
ENSPREG00000015673	-	57	47.656	ENSSTOG00000011790	RRP1B	63	47.656	Ictidomys_tridecemlineatus
ENSPREG00000015673	-	57	46.358	ENSJJAG00000021279	Rrp1b	69	46.358	Jaculus_jaculus
ENSPREG00000015673	-	71	66.903	ENSKMAG00000005539	rrp1	95	63.793	Kryptolebias_marmoratus
ENSPREG00000015673	-	59	48.677	ENSLACG00000017332	-	66	48.148	Latimeria_chalumnae
ENSPREG00000015673	-	77	51.181	ENSLOCG00000004064	-	70	55.191	Lepisosteus_oculatus
ENSPREG00000015673	-	53	44.186	ENSLAFG00000000766	RRP1B	88	45.455	Loxodonta_africana
ENSPREG00000015673	-	59	46.923	ENSMFAG00000039152	RRP1B	64	46.923	Macaca_fascicularis
ENSPREG00000015673	-	58	45.924	ENSMMUG00000000104	RRP1B	62	45.924	Macaca_mulatta
ENSPREG00000015673	-	59	45.924	ENSMNEG00000034269	RRP1B	64	45.924	Macaca_nemestrina
ENSPREG00000015673	-	54	46.923	ENSMLEG00000040044	RRP1B	61	46.923	Mandrillus_leucophaeus
ENSPREG00000015673	-	73	68.031	ENSMAMG00000007131	-	59	68.542	Mastacembelus_armatus
ENSPREG00000015673	-	61	49.211	ENSMGAG00000014591	RRP1B	89	49.737	Meleagris_gallopavo
ENSPREG00000015673	-	54	46.970	ENSMAUG00000021508	Rrp1b	61	46.970	Mesocricetus_auratus
ENSPREG00000015673	-	59	47.328	ENSMICG00000004686	RRP1B	66	47.328	Microcebus_murinus
ENSPREG00000015673	-	56	47.727	ENSMOCG00000001117	Rrp1b	72	47.727	Microtus_ochrogaster
ENSPREG00000015673	-	53	54.945	ENSMODG00000021033	RRP1B	66	47.044	Monodelphis_domestica
ENSPREG00000015673	-	57	47.287	MGP_CAROLIEiJ_G0021376	Rrp1b	68	47.287	Mus_caroli
ENSPREG00000015673	-	55	47.727	ENSMUSG00000058392	Rrp1b	57	58.209	Mus_musculus
ENSPREG00000015673	-	58	47.692	MGP_PahariEiJ_G0023695	Rrp1b	71	47.692	Mus_pahari
ENSPREG00000015673	-	62	44.000	MGP_SPRETEiJ_G0022290	Rrp1b	76	42.541	Mus_spretus
ENSPREG00000015673	-	60	45.479	ENSMLUG00000007738	RRP1B	65	44.681	Myotis_lucifugus
ENSPREG00000015673	-	58	47.297	ENSNGAG00000021073	Rrp1b	64	47.297	Nannospalax_galili
ENSPREG00000015673	-	59	46.923	ENSNLEG00000001490	RRP1B	67	46.923	Nomascus_leucogenys
ENSPREG00000015673	-	59	43.529	ENSODEG00000013177	RRP1B	69	43.529	Octodon_degus
ENSPREG00000015673	-	59	62.921	ENSONIG00000004264	rrp1	76	62.921	Oreochromis_niloticus
ENSPREG00000015673	-	51	47.287	ENSOCUG00000025931	RRP1B	61	47.287	Oryctolagus_cuniculus
ENSPREG00000015673	-	100	43.630	ENSORLG00020007199	-	100	43.483	Oryzias_latipes_hni
ENSPREG00000015673	-	53	51.613	ENSOGAG00000009872	RRP1B	68	51.613	Otolemur_garnettii
ENSPREG00000015673	-	50	48.624	ENSOARG00000011314	RRP1B	61	48.624	Ovis_aries
ENSPREG00000015673	-	54	47.368	ENSPPAG00000035319	RRP1B	61	47.287	Pan_paniscus
ENSPREG00000015673	-	55	54.839	ENSPPRG00000010356	RRP1B	68	44.022	Panthera_pardus
ENSPREG00000015673	-	50	54.839	ENSPTIG00000016894	RRP1B	83	42.384	Panthera_tigris_altaica
ENSPREG00000015673	-	59	47.368	ENSPTRG00000013958	RRP1B	64	47.287	Pan_troglodytes
ENSPREG00000015673	-	59	46.154	ENSPANG00000011090	RRP1B	64	46.923	Papio_anubis
ENSPREG00000015673	-	60	59.140	ENSPKIG00000003422	-	64	57.393	Paramormyrops_kingsleyae
ENSPREG00000015673	-	64	52.473	ENSPSIG00000008152	RRP1B	67	51.491	Pelodiscus_sinensis
ENSPREG00000015673	-	77	47.283	ENSPCIG00000015513	RRP1B	87	47.826	Phascolarctos_cinereus
ENSPREG00000015673	-	100	80.992	ENSPFOG00000007424	-	99	81.228	Poecilia_formosa
ENSPREG00000015673	-	82	90.490	ENSPLAG00000016684	-	99	91.066	Poecilia_latipinna
ENSPREG00000015673	-	100	90.629	ENSPMEG00000007042	-	100	90.985	Poecilia_mexicana
ENSPREG00000015673	-	59	46.923	ENSPPYG00000011470	RRP1B	64	46.923	Pongo_abelii
ENSPREG00000015673	-	51	53.763	ENSPCAG00000013723	RRP1B	58	53.763	Procavia_capensis
ENSPREG00000015673	-	59	47.692	ENSPCOG00000017927	RRP1B	67	47.692	Propithecus_coquereli
ENSPREG00000015673	-	56	58.239	ENSPNAG00000007718	-	52	58.239	Pygocentrus_nattereri
ENSPREG00000015673	-	53	58.511	ENSRNOG00000001194	Rrp1b	59	58.511	Rattus_norvegicus
ENSPREG00000015673	-	59	47.287	ENSRBIG00000041689	RRP1B	63	47.287	Rhinopithecus_bieti
ENSPREG00000015673	-	59	47.287	ENSRROG00000031499	RRP1B	64	47.287	Rhinopithecus_roxellana
ENSPREG00000015673	-	54	45.736	ENSSBOG00000034727	RRP1B	62	45.736	Saimiri_boliviensis_boliviensis
ENSPREG00000015673	-	58	47.486	ENSSHAG00000017789	RRP1B	91	45.478	Sarcophilus_harrisii
ENSPREG00000015673	-	70	68.059	ENSSMAG00000016847	-	92	67.532	Scophthalmus_maximus
ENSPREG00000015673	-	70	66.010	ENSSDUG00000000551	-	63	66.176	Seriola_dumerili
ENSPREG00000015673	-	68	67.876	ENSSLDG00000002538	-	63	66.422	Seriola_lalandi_dorsalis
ENSPREG00000015673	-	57	49.577	ENSSPUG00000002834	RRP1B	99	36.671	Sphenodon_punctatus
ENSPREG00000015673	-	70	62.472	ENSSPAG00000005370	-	65	66.745	Stegastes_partitus
ENSPREG00000015673	-	56	53.125	ENSSSCG00000021698	RRP1B	68	53.125	Sus_scrofa
ENSPREG00000015673	-	64	61.453	ENSTNIG00000005053	rrp1	91	62.849	Tetraodon_nigroviridis
ENSPREG00000015673	-	56	43.305	ENSTBEG00000000422	RRP1B	80	43.059	Tupaia_belangeri
ENSPREG00000015673	-	59	44.110	ENSTTRG00000000723	RRP1B	66	42.520	Tursiops_truncatus
ENSPREG00000015673	-	78	44.565	ENSUAMG00000026765	RRP1B	87	44.959	Ursus_americanus
ENSPREG00000015673	-	53	55.914	ENSUMAG00000025510	RRP1B	98	42.017	Ursus_maritimus
ENSPREG00000015673	-	66	47.253	ENSXETG00000013683	rrp1b	86	47.253	Xenopus_tropicalis
ENSPREG00000015673	-	100	85.514	ENSXMAG00000023123	-	100	85.397	Xiphophorus_maculatus