EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000015736 (Gene tree)
Gene ID: -
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 8216 bases
Position: chrLG2:7704348-7712563
Accession: 103473752
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000023333	KH_1	PF00013.29	2.8e-47	1	3
ENSPREP00000023333	KH_1	PF00013.29	2.8e-47	2	3
ENSPREP00000023333	KH_1	PF00013.29	2.8e-47	3	3
ENSPREP00000023333	KH_2	PF07650.17	8.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000023572	-	921	XM_008424213	ENSPREP00000023333	306 (aa)	XP_008422435	-

Gene Model

Click here to download ENSPREG00000015736's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000015736's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000015736	pcbp3	90	40.299	ENSPREG00000011614	nova1	51	40.299
ENSPREG00000015736	pcbp3	79	34.127	ENSPREG00000009440	igf2bp2b	62	33.571
ENSPREG00000015736	pcbp3	90	38.806	ENSPREG00000018946	-	50	38.806
ENSPREG00000015736	pcbp3	66	38.095	ENSPREG00000000419	khsrp	55	38.095
ENSPREG00000015736	pcbp3	99	94.737	ENSPREG00000020585	-	96	94.737
ENSPREG00000015736	pcbp3	97	54.658	ENSPREG00000017370	-	71	54.658
ENSPREG00000015736	pcbp3	97	73.548	ENSPREG00000006202	pcbp2	95	73.548
ENSPREG00000015736	pcbp3	97	74.038	ENSPREG00000007742	PCBP2	95	74.038
ENSPREG00000015736	pcbp3	97	69.775	ENSPREG00000001797	zgc:110045	92	69.856
ENSPREG00000015736	pcbp3	89	39.062	ENSPREG00000015101	FUBP3	70	39.062
ENSPREG00000015736	pcbp3	88	51.292	ENSPREG00000021498	-	81	51.292
ENSPREG00000015736	pcbp3	72	55.556	ENSPREG00000002843	hnrpkl	51	55.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000015736	pcbp3	99	92.949	ENSAPOG00000016582	-	97	92.332	Acanthochromis_polyacanthus
ENSPREG00000015736	pcbp3	100	97.712	ENSAPOG00000020003	pcbp3	87	97.712	Acanthochromis_polyacanthus
ENSPREG00000015736	pcbp3	97	86.111	ENSAMEG00000001697	-	95	82.006	Ailuropoda_melanoleuca
ENSPREG00000015736	pcbp3	99	89.908	ENSACIG00000010933	pcbp3	95	89.908	Amphilophus_citrinellus
ENSPREG00000015736	pcbp3	99	91.720	ENSACIG00000002739	-	97	91.720	Amphilophus_citrinellus
ENSPREG00000015736	pcbp3	100	95.223	ENSAOCG00000008592	-	98	95.223	Amphiprion_ocellaris
ENSPREG00000015736	pcbp3	88	93.262	ENSAOCG00000007806	-	96	93.262	Amphiprion_ocellaris
ENSPREG00000015736	pcbp3	99	88.131	ENSAPEG00000008011	pcbp3	95	88.131	Amphiprion_percula
ENSPREG00000015736	pcbp3	99	93.506	ENSAPEG00000005209	-	97	93.506	Amphiprion_percula
ENSPREG00000015736	pcbp3	99	90.826	ENSATEG00000015787	-	100	90.826	Anabas_testudineus
ENSPREG00000015736	pcbp3	99	94.426	ENSATEG00000009833	-	97	94.426	Anabas_testudineus
ENSPREG00000015736	pcbp3	98	72.676	ENSAPLG00000008951	-	79	72.676	Anas_platyrhynchos
ENSPREG00000015736	pcbp3	97	87.461	ENSAPLG00000002975	-	95	87.461	Anas_platyrhynchos
ENSPREG00000015736	pcbp3	97	78.963	ENSACAG00000009819	-	94	78.963	Anolis_carolinensis
ENSPREG00000015736	pcbp3	97	80.460	ENSACAG00000004607	-	96	80.460	Anolis_carolinensis
ENSPREG00000015736	pcbp3	74	95.595	ENSANAG00000030702	-	95	95.595	Aotus_nancymaae
ENSPREG00000015736	pcbp3	99	87.834	ENSACLG00000011835	pcbp3	95	87.834	Astatotilapia_calliptera
ENSPREG00000015736	pcbp3	99	94.737	ENSACLG00000003801	-	96	94.737	Astatotilapia_calliptera
ENSPREG00000015736	pcbp3	98	67.385	ENSAMXG00000001760	zgc:110045	73	67.385	Astyanax_mexicanus
ENSPREG00000015736	pcbp3	99	92.434	ENSAMXG00000013588	-	100	92.434	Astyanax_mexicanus
ENSPREG00000015736	pcbp3	99	86.567	ENSAMXG00000003440	pcbp3	95	86.567	Astyanax_mexicanus
ENSPREG00000015736	pcbp3	91	90.043	ENSCAFG00020019472	-	81	90.043	Canis_lupus_dingo
ENSPREG00000015736	pcbp3	97	91.475	ENSCSAG00000007440	-	86	91.475	Chlorocebus_sabaeus
ENSPREG00000015736	pcbp3	98	78.182	ENSCPBG00000000733	-	73	78.182	Chrysemys_picta_bellii
ENSPREG00000015736	pcbp3	97	91.803	ENSCPBG00000012151	-	90	91.803	Chrysemys_picta_bellii
ENSPREG00000015736	pcbp3	99	77.879	ENSCSEG00000016984	-	97	77.879	Cynoglossus_semilaevis
ENSPREG00000015736	pcbp3	100	95.425	ENSCSEG00000000822	pcbp3	99	95.425	Cynoglossus_semilaevis
ENSPREG00000015736	pcbp3	99	92.857	ENSCVAG00000005262	-	97	92.857	Cyprinodon_variegatus
ENSPREG00000015736	pcbp3	99	87.834	ENSCVAG00000014482	pcbp3	95	87.834	Cyprinodon_variegatus
ENSPREG00000015736	pcbp3	99	86.866	ENSDARG00000054378	pcbp3	97	86.866	Danio_rerio
ENSPREG00000015736	pcbp3	97	79.208	ENSETEG00000015988	-	95	79.208	Echinops_telfairi
ENSPREG00000015736	pcbp3	87	75.000	ENSEBUG00000016192	pcbp3	99	75.000	Eptatretus_burgeri
ENSPREG00000015736	pcbp3	94	68.860	ENSEBUG00000005495	pcbp3	68	68.860	Eptatretus_burgeri
ENSPREG00000015736	pcbp3	97	76.299	ENSEBUG00000007485	-	92	75.113	Eptatretus_burgeri
ENSPREG00000015736	pcbp3	99	92.628	ENSELUG00000001560	-	96	84.366	Esox_lucius
ENSPREG00000015736	pcbp3	99	89.644	ENSELUG00000003521	pcbp3	97	89.644	Esox_lucius
ENSPREG00000015736	pcbp3	97	91.148	ENSFALG00000003949	-	95	91.148	Ficedula_albicollis
ENSPREG00000015736	pcbp3	98	72.958	ENSFALG00000004411	-	74	72.958	Ficedula_albicollis
ENSPREG00000015736	pcbp3	100	97.059	ENSFHEG00000016615	pcbp3	96	97.059	Fundulus_heteroclitus
ENSPREG00000015736	pcbp3	99	93.182	ENSFHEG00000006539	-	97	93.182	Fundulus_heteroclitus
ENSPREG00000015736	pcbp3	99	77.612	ENSGMOG00000011992	pcbp3	96	77.679	Gadus_morhua
ENSPREG00000015736	pcbp3	99	68.485	ENSGMOG00000008611	-	100	68.485	Gadus_morhua
ENSPREG00000015736	pcbp3	98	79.938	ENSGALG00000013155	-	99	79.938	Gallus_gallus
ENSPREG00000015736	pcbp3	97	80.523	ENSGALG00000004394	-	98	89.130	Gallus_gallus
ENSPREG00000015736	pcbp3	99	92.308	ENSGAFG00000010274	-	95	92.308	Gambusia_affinis
ENSPREG00000015736	pcbp3	100	91.867	ENSGAFG00000011430	pcbp3	96	91.867	Gambusia_affinis
ENSPREG00000015736	pcbp3	99	86.145	ENSGACG00000002266	-	96	86.145	Gasterosteus_aculeatus
ENSPREG00000015736	pcbp3	99	78.310	ENSGACG00000014955	-	97	78.310	Gasterosteus_aculeatus
ENSPREG00000015736	pcbp3	87	88.390	ENSGAGG00000000271	-	100	88.390	Gopherus_agassizii
ENSPREG00000015736	pcbp3	78	87.500	ENSGAGG00000006956	-	76	87.500	Gopherus_agassizii
ENSPREG00000015736	pcbp3	100	94.904	ENSHBUG00000010697	pcbp3	99	94.904	Haplochromis_burtoni
ENSPREG00000015736	pcbp3	99	94.737	ENSHBUG00000021782	-	96	94.737	Haplochromis_burtoni
ENSPREG00000015736	pcbp3	99	88.095	ENSHCOG00000017868	pcbp3	95	88.095	Hippocampus_comes
ENSPREG00000015736	pcbp3	99	87.500	ENSHCOG00000006067	-	96	87.500	Hippocampus_comes
ENSPREG00000015736	pcbp3	99	94.737	ENSIPUG00000006238	pcbp3	96	94.737	Ictalurus_punctatus
ENSPREG00000015736	pcbp3	99	87.834	ENSKMAG00000003046	pcbp3	95	87.834	Kryptolebias_marmoratus
ENSPREG00000015736	pcbp3	99	91.346	ENSKMAG00000018530	-	95	91.346	Kryptolebias_marmoratus
ENSPREG00000015736	pcbp3	99	97.049	ENSLBEG00000006201	pcbp3	95	97.049	Labrus_bergylta
ENSPREG00000015736	pcbp3	99	79.487	ENSLBEG00000006542	-	96	79.487	Labrus_bergylta
ENSPREG00000015736	pcbp3	98	73.011	ENSLACG00000010804	zgc:110045	74	73.011	Latimeria_chalumnae
ENSPREG00000015736	pcbp3	97	78.857	ENSLACG00000010386	pcbp3	73	78.857	Latimeria_chalumnae
ENSPREG00000015736	pcbp3	97	78.287	ENSLOCG00000005058	zgc:110045	79	78.287	Lepisosteus_oculatus
ENSPREG00000015736	pcbp3	97	86.154	ENSLOCG00000009369	pcbp3	95	86.154	Lepisosteus_oculatus
ENSPREG00000015736	pcbp3	100	97.386	ENSMAMG00000022336	pcbp3	94	97.386	Mastacembelus_armatus
ENSPREG00000015736	pcbp3	99	93.115	ENSMAMG00000011620	-	97	93.115	Mastacembelus_armatus
ENSPREG00000015736	pcbp3	99	88.657	ENSMZEG00005008993	pcbp3	98	87.798	Maylandia_zebra
ENSPREG00000015736	pcbp3	99	86.984	ENSMZEG00005014882	-	95	87.619	Maylandia_zebra
ENSPREG00000015736	pcbp3	97	76.081	ENSMGAG00000001883	-	95	76.369	Meleagris_gallopavo
ENSPREG00000015736	pcbp3	98	72.958	ENSMGAG00000006794	-	74	72.958	Meleagris_gallopavo
ENSPREG00000015736	pcbp3	100	94.603	ENSMMOG00000000730	pcbp3	88	94.603	Mola_mola
ENSPREG00000015736	pcbp3	99	94.737	ENSMMOG00000005216	-	96	94.737	Mola_mola
ENSPREG00000015736	pcbp3	75	75.926	ENSMODG00000027884	-	94	75.926	Monodelphis_domestica
ENSPREG00000015736	pcbp3	99	90.520	ENSMALG00000000691	pcbp3	95	90.520	Monopterus_albus
ENSPREG00000015736	pcbp3	97	83.962	ENSMPUG00000001779	-	87	83.962	Mustela_putorius_furo
ENSPREG00000015736	pcbp3	99	90.214	ENSNBRG00000016409	-	95	90.214	Neolamprologus_brichardi
ENSPREG00000015736	pcbp3	99	87.619	ENSNBRG00000016714	-	95	87.619	Neolamprologus_brichardi
ENSPREG00000015736	pcbp3	97	80.409	ENSOPRG00000003431	-	99	80.409	Ochotona_princeps
ENSPREG00000015736	pcbp3	100	83.193	ENSONIG00000012122	-	98	83.193	Oreochromis_niloticus
ENSPREG00000015736	pcbp3	99	92.308	ENSONIG00000004611	-	97	92.308	Oreochromis_niloticus
ENSPREG00000015736	pcbp3	97	90.820	ENSOCUG00000002696	-	86	90.820	Oryctolagus_cuniculus
ENSPREG00000015736	pcbp3	99	92.308	ENSORLG00000022739	-	97	92.308	Oryzias_latipes
ENSPREG00000015736	pcbp3	99	95.192	ENSORLG00000000059	pcbp3	100	95.192	Oryzias_latipes
ENSPREG00000015736	pcbp3	99	94.408	ENSORLG00020006124	-	96	94.408	Oryzias_latipes_hni
ENSPREG00000015736	pcbp3	99	95.192	ENSORLG00020012671	pcbp3	97	95.192	Oryzias_latipes_hni
ENSPREG00000015736	pcbp3	99	92.308	ENSORLG00015008051	-	95	92.308	Oryzias_latipes_hsok
ENSPREG00000015736	pcbp3	99	95.192	ENSORLG00015000429	pcbp3	97	95.192	Oryzias_latipes_hsok
ENSPREG00000015736	pcbp3	99	94.408	ENSOMEG00000020162	-	96	94.408	Oryzias_melastigma
ENSPREG00000015736	pcbp3	91	98.208	ENSOMEG00000020811	pcbp3	97	98.208	Oryzias_melastigma
ENSPREG00000015736	pcbp3	97	78.632	ENSOGAG00000008044	-	96	78.632	Otolemur_garnettii
ENSPREG00000015736	pcbp3	78	84.239	ENSPKIG00000020913	-	82	84.239	Paramormyrops_kingsleyae
ENSPREG00000015736	pcbp3	99	94.079	ENSPKIG00000019329	pcbp3	97	94.079	Paramormyrops_kingsleyae
ENSPREG00000015736	pcbp3	97	77.950	ENSPSIG00000014970	-	95	78.571	Pelodiscus_sinensis
ENSPREG00000015736	pcbp3	73	79.757	ENSPSIG00000008350	-	68	79.757	Pelodiscus_sinensis
ENSPREG00000015736	pcbp3	99	88.323	ENSPMGG00000022383	pcbp3	95	88.323	Periophthalmus_magnuspinnatus
ENSPREG00000015736	pcbp3	97	70.418	ENSPMAG00000004551	pcbp3	88	70.418	Petromyzon_marinus
ENSPREG00000015736	pcbp3	78	81.579	ENSPMAG00000004637	-	97	81.579	Petromyzon_marinus
ENSPREG00000015736	pcbp3	97	85.061	ENSPCIG00000028092	-	96	84.475	Phascolarctos_cinereus
ENSPREG00000015736	pcbp3	98	91.054	ENSPLAG00000004074	-	89	91.054	Poecilia_latipinna
ENSPREG00000015736	pcbp3	100	87.608	ENSPLAG00000011449	pcbp3	88	87.608	Poecilia_latipinna
ENSPREG00000015736	pcbp3	100	91.843	ENSPMEG00000021239	pcbp3	95	87.500	Poecilia_mexicana
ENSPREG00000015736	pcbp3	99	87.821	ENSPMEG00000006653	-	96	88.000	Poecilia_mexicana
ENSPREG00000015736	pcbp3	100	95.223	ENSPNYG00000012326	pcbp3	96	95.223	Pundamilia_nyererei
ENSPREG00000015736	pcbp3	99	94.737	ENSPNYG00000013205	-	96	94.737	Pundamilia_nyererei
ENSPREG00000015736	pcbp3	99	92.949	ENSPNAG00000015104	pcbp3	97	92.949	Pygocentrus_nattereri
ENSPREG00000015736	pcbp3	99	93.046	ENSPNAG00000008541	-	98	93.046	Pygocentrus_nattereri
ENSPREG00000015736	pcbp3	97	91.475	ENSRNOG00000001245	Pcbp3	95	91.475	Rattus_norvegicus
ENSPREG00000015736	pcbp3	97	81.905	ENSRBIG00000028177	-	87	81.905	Rhinopithecus_bieti
ENSPREG00000015736	pcbp3	97	85.538	ENSSHAG00000007890	-	95	85.538	Sarcophilus_harrisii
ENSPREG00000015736	pcbp3	99	92.628	ENSSFOG00015010205	pcbp3	95	92.628	Scleropages_formosus
ENSPREG00000015736	pcbp3	97	82.566	ENSSFOG00015007118	-	93	82.566	Scleropages_formosus
ENSPREG00000015736	pcbp3	99	84.776	ENSSFOG00015014706	pcbp3	95	84.776	Scleropages_formosus
ENSPREG00000015736	pcbp3	99	93.160	ENSSMAG00000003135	-	97	93.160	Scophthalmus_maximus
ENSPREG00000015736	pcbp3	99	97.705	ENSSMAG00000011929	pcbp3	98	97.705	Scophthalmus_maximus
ENSPREG00000015736	pcbp3	99	90.000	ENSSDUG00000011608	pcbp3	99	90.000	Seriola_dumerili
ENSPREG00000015736	pcbp3	99	89.032	ENSSDUG00000008502	-	95	89.032	Seriola_dumerili
ENSPREG00000015736	pcbp3	99	92.949	ENSSLDG00000020161	-	95	92.949	Seriola_lalandi_dorsalis
ENSPREG00000015736	pcbp3	99	90.000	ENSSLDG00000008518	pcbp3	99	90.000	Seriola_lalandi_dorsalis
ENSPREG00000015736	pcbp3	98	74.493	ENSSPUG00000013214	-	91	81.315	Sphenodon_punctatus
ENSPREG00000015736	pcbp3	99	77.879	ENSSPAG00000023341	-	95	77.879	Stegastes_partitus
ENSPREG00000015736	pcbp3	88	93.262	ENSSPAG00000004190	-	96	93.262	Stegastes_partitus
ENSPREG00000015736	pcbp3	97	84.308	ENSTGUG00000003316	-	95	84.308	Taeniopygia_guttata
ENSPREG00000015736	pcbp3	97	84.918	ENSTGUG00000008158	-	95	84.918	Taeniopygia_guttata
ENSPREG00000015736	pcbp3	98	90.000	ENSTRUG00000006280	-	96	90.000	Takifugu_rubripes
ENSPREG00000015736	pcbp3	99	91.304	ENSTRUG00000013604	pcbp3	95	91.304	Takifugu_rubripes
ENSPREG00000015736	pcbp3	97	79.023	ENSTTRG00000015075	-	96	79.023	Tursiops_truncatus
ENSPREG00000015736	pcbp3	90	74.691	ENSXETG00000010491	pcbp2	71	74.691	Xenopus_tropicalis
ENSPREG00000015736	pcbp3	97	84.923	ENSXETG00000011483	pcbp1	95	84.923	Xenopus_tropicalis
ENSPREG00000015736	pcbp3	99	87.500	ENSXCOG00000020481	pcbp3	95	87.500	Xiphophorus_couchianus
ENSPREG00000015736	pcbp3	99	88.131	ENSXMAG00000008175	pcbp3	95	88.131	Xiphophorus_maculatus
ENSPREG00000015736	pcbp3	99	92.628	ENSXMAG00000028711	-	95	92.628	Xiphophorus_maculatus