EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000015823 (Gene tree)
Gene ID: 103468018
Gene Symbol: tnrc6c2
Alias: si:dkey-10p5.9
Full Name: trinucleotide repeat-containing gene 6C protein-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 16168 bases
Position: chrLG1:24030102-24046269
Accession: 103468018
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000023581	RRM_1	PF00076.22	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000023821	-	4644	-	ENSPREP00000023581	1547 (aa)	-	-
ENSPRET00000023898	-	4308	XM_008414836	ENSPREP00000023658	1435 (aa)	XP_008413058	-

Gene Model

Click here to download ENSPREG00000015823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000015823's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000015823	tnrc6c2	61	86.492	ENSAOCG00000017648	tnrc6c2	87	78.954	Amphiprion_ocellaris
ENSPREG00000015823	tnrc6c2	100	77.278	ENSATEG00000003656	tnrc6c2	100	77.729	Anabas_testudineus
ENSPREG00000015823	tnrc6c2	61	87.987	ENSACLG00000006469	tnrc6c2	88	79.300	Astatotilapia_calliptera
ENSPREG00000015823	tnrc6c2	100	57.031	ENSAMXG00000009579	tnrc6c2	99	57.290	Astyanax_mexicanus
ENSPREG00000015823	tnrc6c2	100	57.428	ENSDARG00000103851	tnrc6c2	100	55.669	Danio_rerio
ENSPREG00000015823	tnrc6c2	100	62.448	ENSELUG00000007206	tnrc6c2	99	62.262	Esox_lucius
ENSPREG00000015823	tnrc6c2	91	75.281	ENSELUG00000008149	-	83	75.281	Esox_lucius
ENSPREG00000015823	tnrc6c2	100	84.255	ENSFHEG00000003901	tnrc6c2	100	84.498	Fundulus_heteroclitus
ENSPREG00000015823	tnrc6c2	100	72.399	ENSGACG00000019401	tnrc6c2	90	72.032	Gasterosteus_aculeatus
ENSPREG00000015823	tnrc6c2	61	87.987	ENSHBUG00000018310	tnrc6c2	88	79.300	Haplochromis_burtoni
ENSPREG00000015823	tnrc6c2	100	73.301	ENSHCOG00000017802	tnrc6c2	87	72.623	Hippocampus_comes
ENSPREG00000015823	tnrc6c2	100	53.077	ENSIPUG00000022767	tnrc6c2	99	51.446	Ictalurus_punctatus
ENSPREG00000015823	tnrc6c2	60	87.970	ENSMAMG00000001718	tnrc6c2	96	88.292	Mastacembelus_armatus
ENSPREG00000015823	tnrc6c2	61	87.987	ENSMZEG00005023905	tnrc6c2	88	79.360	Maylandia_zebra
ENSPREG00000015823	tnrc6c2	60	88.021	ENSMALG00000020932	tnrc6c2	100	77.539	Monopterus_albus
ENSPREG00000015823	tnrc6c2	100	79.310	ENSNBRG00000000452	tnrc6c2	100	79.436	Neolamprologus_brichardi
ENSPREG00000015823	tnrc6c2	97	81.258	ENSONIG00000018123	tnrc6c2	100	81.321	Oreochromis_niloticus
ENSPREG00000015823	tnrc6c2	100	77.011	ENSORLG00000003327	tnrc6c2	87	77.240	Oryzias_latipes
ENSPREG00000015823	tnrc6c2	100	76.407	ENSORLG00020010730	tnrc6c2	87	77.300	Oryzias_latipes_hni
ENSPREG00000015823	tnrc6c2	100	76.709	ENSORLG00015009232	tnrc6c2	87	77.603	Oryzias_latipes_hsok
ENSPREG00000015823	tnrc6c2	100	77.966	ENSOMEG00000017952	tnrc6c2	87	77.906	Oryzias_melastigma
ENSPREG00000015823	tnrc6c2	99	87.776	ENSPFOG00000011590	tnrc6c2	90	88.091	Poecilia_formosa
ENSPREG00000015823	tnrc6c2	100	95.162	ENSPLAG00000006992	tnrc6c2	100	95.162	Poecilia_latipinna
ENSPREG00000015823	tnrc6c2	100	94.073	ENSPMEG00000012946	tnrc6c2	100	93.881	Poecilia_mexicana
ENSPREG00000015823	tnrc6c2	61	87.882	ENSPNYG00000002582	tnrc6c2	100	78.795	Pundamilia_nyererei
ENSPREG00000015823	tnrc6c2	100	55.230	ENSPNAG00000026838	tnrc6c2	99	56.239	Pygocentrus_nattereri
ENSPREG00000015823	tnrc6c2	60	85.576	ENSSMAG00000015145	tnrc6c2	100	75.345	Scophthalmus_maximus
ENSPREG00000015823	tnrc6c2	100	79.530	ENSSDUG00000020741	tnrc6c2	100	78.989	Seriola_dumerili
ENSPREG00000015823	tnrc6c2	100	79.350	ENSSLDG00000002077	tnrc6c2	100	78.808	Seriola_lalandi_dorsalis
ENSPREG00000015823	tnrc6c2	61	87.579	ENSSPAG00000013052	tnrc6c2	87	80.698	Stegastes_partitus
ENSPREG00000015823	tnrc6c2	100	70.717	ENSTNIG00000004178	tnrc6c2	95	70.680	Tetraodon_nigroviridis
ENSPREG00000015823	tnrc6c2	100	90.762	ENSXCOG00000013252	tnrc6c2	100	91.448	Xiphophorus_couchianus
ENSPREG00000015823	tnrc6c2	100	89.599	ENSXMAG00000006739	tnrc6c2	100	90.152	Xiphophorus_maculatus