EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000015955 (Gene tree)
Gene ID: 103469138
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rap-1b-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 627 bases
Position: chrLG8:21386871-21387497
Accession: 103469138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000023624	MMR_HSR1	PF01926.23	7.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000023864	-	627	XM_008416656	ENSPREP00000023624	208 (aa)	XP_008414878	UPI0004A28BC3

Gene Model

Click here to download ENSPREG00000015955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000015955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000015955	-	75	31.737	ENSPREG00000021747	rasl10a	83	31.737
ENSPREG00000015955	-	78	32.716	ENSPREG00000019341	hrasb	84	32.919
ENSPREG00000015955	-	55	38.596	ENSPREG00000016664	rap2b	90	40.476
ENSPREG00000015955	-	77	36.145	ENSPREG00000012522	-	82	36.145
ENSPREG00000015955	-	82	31.214	ENSPREG00000010752	rheb	92	31.214
ENSPREG00000015955	-	77	31.677	ENSPREG00000010284	rab15	75	31.677
ENSPREG00000015955	-	77	31.176	ENSPREG00000006055	rasl11a	66	31.176
ENSPREG00000015955	-	74	30.573	ENSPREG00000012803	rhebl1	83	30.573
ENSPREG00000015955	-	76	33.929	ENSPREG00000019386	rasl11b	71	34.254
ENSPREG00000015955	-	81	34.884	ENSPREG00000001832	rab9a	85	34.884
ENSPREG00000015955	-	100	73.558	ENSPREG00000017010	rasd4	100	73.558
ENSPREG00000015955	-	81	30.178	ENSPREG00000014634	rab30	82	30.178
ENSPREG00000015955	-	74	35.032	ENSPREG00000016102	si:ch73-116o1.2	80	36.527
ENSPREG00000015955	-	77	32.121	ENSPREG00000006970	rab9b	75	32.121
ENSPREG00000015955	-	83	32.759	ENSPREG00000017567	rab13	79	32.759
ENSPREG00000015955	-	78	33.333	ENSPREG00000018287	KRAS	99	30.653
ENSPREG00000015955	-	72	35.570	ENSPREG00000006363	rras	80	37.107

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000015955	-	100	81.731	ENSAPOG00000014798	-	100	81.731	Acanthochromis_polyacanthus
ENSPREG00000015955	-	100	75.962	ENSAPOG00000013337	rasd4	100	75.962	Acanthochromis_polyacanthus
ENSPREG00000015955	-	95	54.455	ENSAPOG00000019479	rasd3	96	54.455	Acanthochromis_polyacanthus
ENSPREG00000015955	-	100	74.519	ENSACIG00000008211	rasd4	100	74.519	Amphilophus_citrinellus
ENSPREG00000015955	-	100	83.654	ENSACIG00000006211	-	100	83.654	Amphilophus_citrinellus
ENSPREG00000015955	-	100	76.442	ENSAOCG00000011925	rasd4	100	76.442	Amphiprion_ocellaris
ENSPREG00000015955	-	100	81.731	ENSAOCG00000013791	-	100	81.731	Amphiprion_ocellaris
ENSPREG00000015955	-	100	76.442	ENSAPEG00000001236	rasd4	100	76.442	Amphiprion_percula
ENSPREG00000015955	-	100	81.731	ENSAPEG00000014385	-	100	81.731	Amphiprion_percula
ENSPREG00000015955	-	100	84.135	ENSATEG00000004140	rasd4	100	84.135	Anabas_testudineus
ENSPREG00000015955	-	100	75.962	ENSATEG00000004192	-	100	75.962	Anabas_testudineus
ENSPREG00000015955	-	100	74.519	ENSACLG00000005453	-	100	74.519	Astatotilapia_calliptera
ENSPREG00000015955	-	100	82.692	ENSCSEG00000017910	-	100	82.692	Cynoglossus_semilaevis
ENSPREG00000015955	-	99	74.634	ENSCSEG00000003581	rasd4	97	74.634	Cynoglossus_semilaevis
ENSPREG00000015955	-	100	90.865	ENSCVAG00000014662	-	100	90.865	Cyprinodon_variegatus
ENSPREG00000015955	-	99	72.464	ENSCVAG00000004658	rasd4	99	72.464	Cyprinodon_variegatus
ENSPREG00000015955	-	91	43.814	FBgn0040370	CG13375	70	43.590	Drosophila_melanogaster
ENSPREG00000015955	-	95	45.685	ENSEBUG00000013908	rasd3	91	45.685	Eptatretus_burgeri
ENSPREG00000015955	-	100	71.090	ENSELUG00000008115	-	100	71.090	Esox_lucius
ENSPREG00000015955	-	99	69.756	ENSFALG00000000852	-	99	69.756	Ficedula_albicollis
ENSPREG00000015955	-	100	73.077	ENSFHEG00000003385	rasd4	100	73.077	Fundulus_heteroclitus
ENSPREG00000015955	-	100	91.346	ENSFHEG00000016103	-	100	91.346	Fundulus_heteroclitus
ENSPREG00000015955	-	100	73.077	ENSGAFG00000010126	rasd4	100	73.077	Gambusia_affinis
ENSPREG00000015955	-	100	76.923	ENSGACG00000019357	rasd4	100	76.923	Gasterosteus_aculeatus
ENSPREG00000015955	-	99	71.707	ENSGAGG00000022039	-	99	71.707	Gopherus_agassizii
ENSPREG00000015955	-	100	74.519	ENSHBUG00000003805	-	100	74.519	Haplochromis_burtoni
ENSPREG00000015955	-	100	78.365	ENSHCOG00000015161	-	100	78.365	Hippocampus_comes
ENSPREG00000015955	-	100	74.038	ENSHCOG00000018554	rasd4	100	74.038	Hippocampus_comes
ENSPREG00000015955	-	100	68.269	ENSIPUG00000021888	-	100	68.269	Ictalurus_punctatus
ENSPREG00000015955	-	100	74.038	ENSKMAG00000000984	rasd4	100	74.038	Kryptolebias_marmoratus
ENSPREG00000015955	-	100	64.423	ENSLACG00000003581	rasd3	100	64.423	Latimeria_chalumnae
ENSPREG00000015955	-	100	67.788	ENSLACG00000001282	-	100	67.788	Latimeria_chalumnae
ENSPREG00000015955	-	100	72.596	ENSLOCG00000017761	rasd4	100	72.596	Lepisosteus_oculatus
ENSPREG00000015955	-	100	62.085	ENSLOCG00000018104	rasd3	100	62.085	Lepisosteus_oculatus
ENSPREG00000015955	-	100	75.000	ENSMAMG00000001194	-	100	75.000	Mastacembelus_armatus
ENSPREG00000015955	-	100	74.519	ENSMZEG00005023931	-	100	74.519	Maylandia_zebra
ENSPREG00000015955	-	100	84.615	ENSMMOG00000012444	rasd4	100	84.615	Mola_mola
ENSPREG00000015955	-	100	82.692	ENSMALG00000019233	rasd4	100	82.692	Monopterus_albus
ENSPREG00000015955	-	100	74.519	ENSMALG00000022582	-	100	74.519	Monopterus_albus
ENSPREG00000015955	-	100	84.615	ENSNBRG00000001521	-	100	84.615	Neolamprologus_brichardi
ENSPREG00000015955	-	100	75.000	ENSONIG00000021230	-	100	75.000	Oreochromis_niloticus
ENSPREG00000015955	-	100	72.115	ENSORLG00020019402	rasd4	100	72.115	Oryzias_latipes_hni
ENSPREG00000015955	-	100	72.115	ENSORLG00015019530	rasd4	100	72.115	Oryzias_latipes_hsok
ENSPREG00000015955	-	100	72.115	ENSOMEG00000010545	rasd4	100	72.115	Oryzias_melastigma
ENSPREG00000015955	-	100	77.885	ENSOMEG00000019524	-	100	77.885	Oryzias_melastigma
ENSPREG00000015955	-	100	73.558	ENSPKIG00000007853	rasd4	100	73.558	Paramormyrops_kingsleyae
ENSPREG00000015955	-	100	59.716	ENSPKIG00000013103	rasd3	100	59.716	Paramormyrops_kingsleyae
ENSPREG00000015955	-	100	56.398	ENSPKIG00000018772	-	100	56.398	Paramormyrops_kingsleyae
ENSPREG00000015955	-	99	68.293	ENSPSIG00000001290	-	99	68.293	Pelodiscus_sinensis
ENSPREG00000015955	-	100	69.712	ENSPMGG00000000859	rasd4	100	69.712	Periophthalmus_magnuspinnatus
ENSPREG00000015955	-	100	83.654	ENSPMGG00000012580	-	100	83.654	Periophthalmus_magnuspinnatus
ENSPREG00000015955	-	100	73.077	ENSPLAG00000003951	rasd4	98	73.077	Poecilia_latipinna
ENSPREG00000015955	-	100	98.558	ENSPLAG00000006115	-	100	98.558	Poecilia_latipinna
ENSPREG00000015955	-	100	99.038	ENSPMEG00000003690	-	100	99.038	Poecilia_mexicana
ENSPREG00000015955	-	100	73.558	ENSPMEG00000021391	rasd4	98	73.558	Poecilia_mexicana
ENSPREG00000015955	-	100	75.000	ENSPNYG00000016378	-	100	75.000	Pundamilia_nyererei
ENSPREG00000015955	-	100	68.750	ENSPNAG00000005318	-	100	68.750	Pygocentrus_nattereri
ENSPREG00000015955	-	100	75.962	ENSSFOG00015004613	rasd4	100	75.962	Scleropages_formosus
ENSPREG00000015955	-	99	60.190	ENSSFOG00015008777	rasd3	99	60.190	Scleropages_formosus
ENSPREG00000015955	-	100	82.692	ENSSMAG00000009101	-	100	82.692	Scophthalmus_maximus
ENSPREG00000015955	-	100	75.481	ENSSMAG00000016456	rasd4	100	75.481	Scophthalmus_maximus
ENSPREG00000015955	-	100	83.654	ENSSDUG00000015982	rasd4	100	83.654	Seriola_dumerili
ENSPREG00000015955	-	100	75.481	ENSSDUG00000020340	-	100	75.481	Seriola_dumerili
ENSPREG00000015955	-	95	56.436	ENSSLDG00000016267	rasd3	94	56.436	Seriola_lalandi_dorsalis
ENSPREG00000015955	-	100	83.654	ENSSLDG00000017618	rasd4	100	83.654	Seriola_lalandi_dorsalis
ENSPREG00000015955	-	100	75.000	ENSSLDG00000002757	-	98	75.000	Seriola_lalandi_dorsalis
ENSPREG00000015955	-	100	83.173	ENSSPAG00000011401	-	100	83.173	Stegastes_partitus
ENSPREG00000015955	-	100	76.442	ENSSPAG00000021839	rasd4	100	76.442	Stegastes_partitus
ENSPREG00000015955	-	99	72.683	ENSTGUG00000007747	-	99	72.683	Taeniopygia_guttata
ENSPREG00000015955	-	100	73.558	ENSTRUG00000022489	rasd4	100	73.558	Takifugu_rubripes
ENSPREG00000015955	-	100	73.558	ENSXCOG00000013226	rasd4	100	73.558	Xiphophorus_couchianus
ENSPREG00000015955	-	95	65.877	ENSXMAG00000021609	rasd4	99	65.877	Xiphophorus_maculatus